Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35488 |
Symbol | |
ID | 7200875 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 21164 |
End bp | 22928 |
Gene Length | 1765 bp |
Protein Length | 330 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179959 |
Protein GI | 219118369 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.154028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCGGA GCCACACAGC CAGTGGCAGA ATTGAGCAGA AGGAGAAATT CGTAAAATTA AGAAAGCCGT TTGCCACTGA CTGCAGGTTT CTCAAGCACC ACAACAATTT TGATGTTTTT TGTTGTGAAT GGGTGTCGGC TATCCGTCAA TTGACCGCCC ACAGCATTCC TGCATTAAAT GGTCGTGTTG CTACGGAGCT TTTGCAAGGG GACACCCCTG ATATTTCTGA GTACGCGCAA TTTGACTGGT ATGAGCCTGT CTGGTTCATT GATCCAACTT CTGCTTTCCC TGAAATGAAG AAGCGATTGG GCTGGTGGGT CGGAGTTGCA TCAGATGTGG GACAGGCAAT GACTTTTTGG ATCCTTCCAG AGTCATGCAT CCCAATTGCA CGGTCCTCTG TTGCTTGTGT CTTCCCTGAG GTAGCCGCTA CTGATGAATT TAAGGCTGAC CTTGCTGAAG TAGATCTAGC CATCAAAACG AAAATTGGCA ACAGCAAAAC TGTAGAAGAA AATCAGGTTA TTGAGGGTCA ACTCGCAAAT CTAGTTTCGG GTCCAACCGA TGATGTGTTC AAAGGGTATG CCAACAAGGA TTTCCACCCT CTCGAAGAGG CTGCCGAAAA GGCCGAAGCC AACAATTATA TGCCCGAAAC CTTGGACAAA TATCTGACCG CTGAAGTCTT ACTACCAACT GGTGGTGAAT TGTTGCGTGG TGTCGTTAAG GCCCGGAAAC ATGATGCTGA CGGCAACCCT GTGGGGACCC GTCACAGCAG TCCAATCCTA GACACGCGTG AATATGAGGT AGAGCTTCCT GACAGTTCAA TCAATATGTA TGCTGCCAAC ATATTTGACG AGAACATGTA CGCGCAAATC GACCATGAAG GCCGTGAATT TCTCTTGATG GAAGAGATAA CAGACCATAG TTGATGGCAA CGCGGTTTGC AAGGATGATG GCTTTACCGC TGGGAAGAAT GGCAACCGGA AACCTTGCAT GACAACAAAA GGTTGGAAAC TTCTTGTAAC ATAAAAAGAT GAATCAACAA TTTGGGTTCC GTTGAAGGAC CTGAAAGAAT TGAACCCTAG TTCTACTTGG TTTTGACCGC ATTGATTGGT CACCTCCGCC ATCAACAGAA TCTTATTAGC GAAATGCGCT CTACATGCCC AAAAGTTGCA GATACCTCTG GCTATCAATG GCATGCACAA GAACCTGGAT TTGTACCAAA AGACATTGCC TTCTAGTGTA CTTGAACAAG AAGAAACCAA GTTGCAGCCC ATCAAAGTCA TGGTGGATTT TTCTGTATGC AGTTGATGCC TTTGCAAAAG AGGCCAAAGC TGTATTTGTT GTCCTCCAGG GTGTGAAAAT ATTAGCATTG TAGCAAAAAC CTGCGCTCAA TGGTCTAGTG GACACCTCTT GTCGAATGTC TGGGATGGCT GGGCCTCTCA AGCAAGACCA GATTGATGCA ATAACAGCAA TCAAGCCAGC AGAGACAGTT GGGAGCTTTG TAATTACTCA CAGCAAGTCT GTCAATGCTC GGATGGTCTT GGAATGTGGG TAATTGAGAC CATTCAAGAA TTGGAGTTGG ATACAGACAA GTTTTCTTGG TTGTCAGCTA GTATTGGAAA GCTCTTTGTT GCTGCTGTCA ATAGCATCAC AAACATTTTA ATTATTTGTG GCGGAAATGA AGCATCGGAT GCGGAGCTAG CACCTGTGCT TCAATATGAG CTAGCTGCAA CTAATTCAGA TGCATCAGAT GCGACTGCAG TGTAA
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Protein sequence | MYRSHTASGR IEQKEKFVKL RKPFATDCRF LKHHNNFDVF CCEWVSAIRQ LTAHSIPALN GRVATELLQG DTPDISEYAQ FDWYEPVWFI DPTSAFPEMK KRLGWWVGVA SDVGQAMTFW ILPESCIPIA RSSVACVFPE VAATDEFKAD LAEVDLAIKT KIGNSKTVEE NQVIEGQLAN LVSGPTDDVF KGILLAKCAL HAQKLQIPLA INGMHKNLDL YQKTLPSSVL EQEETKLQPI KVMVDFSQVC QCSDGLGMWV IETIQELELD TDKFSWLSAS IGKLFVAAVN SITNILIICG GNEASDAELA PVLQYELAAT NSDASDATAV
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