Gene PHATRDRAFT_27326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_27326 
Symbol 
ID7200908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp198489 
End bp199631 
Gene Length1143 bp 
Protein Length279 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179990 
Protein GI219118435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000098 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTATTTCAG TGAAGTTGCG CTGCGAGTCA GCAGCATCGC GGCCACTAAC CTTGTGACTC 
CTAGTTCCAT TAAACTCTTT TGATCTATTT TCACCTGAAG AAGGCGTTAA TGTAAGGCGA
TCACGGAACG TCGTCGATAC TCTTGCCATA CTTACTGTTG ACAACAACCC AGTTTGAACG
CTGTAGGGTA CGAAAGAGGT GCGGCAACGG TACCACCTCT GTAGACATCC GCGTACACAT
TTCCCTACGA TTTGACTTGT ATTTGCAATT AGGAAAGCAC TAGATAGAGC GATATTTATA
TTTTCCATGG TGAGCAAACC ATCTCGAGTA TCTCTTACGG AAGAGGCAGC CGGGGGGTTA
TTAGCGGGCA TCGTTGGAAC AGTCATCGGC TTTCCCCTTG ATTTAATCAA AACAAGAATG
CAAACTCACC AAGGCCAACC GGGTGGTGGT ATTTTCGAAA ATGGATTACG CGTTGTAAAA
TCCGAAGGTA TTTTGGCCCT ATACAAAGGA ATAGCGCCAC CTCTGATTTC ACTATCAATT
TTGAACACTT TCACGTTTGC GAGCTACTCC TACTTCCAAA CAATATTTCA GGCTGATAGG
GGTTGGGATT GGCGAAACTC AGTAGCTGGT GGAGTTTGTG GTCCGTTTGC TGCCACTGTG
TCAACAGTGG AGAATTTAGT AAAGACTCAA ATGCAAGTGG ACAATATCTC GAAAAAGCAG
TTTATTGGAT CTTGGGATTG TGTGACGAAG TTGACAAGAA CGCATGGCCC ACTAATACTG
TACACCGGTT TCGGAATCAA CTCTATTCGA GAAATTGCGT TCCTTACAAC TTACTTTGGA
CTTTACGAAG GTTTGCGACA GACATTTGGG GACCTTGCCG GCAGGCATCC CATAAGCACA
TGGACAATTC CAGTCGCTGG AGGTTTCGCG GGTGCCGCTT CCTGGTTTCT GAGTTTCCCA
CTGGATTGTA TACGAGCGGG CGTTCAGGGC CAGGATATGT CAAGTCAACG CAAAGGGTCA
TTAAAAGTAC TCTGGTATTT GATGGAAACG AAAGGGGTTA AAGGTGTCTA CGGCGGAGTC
TCGCCGAGTA TTGTGAGGGC TTTCCTTGTC TCAGGAAGTC GTTTCAGTGC CTATGAAGGT
GCA
 
Protein sequence
MVSKPSRVSL TEEAAGGLLA GIVGTVIGFP LDLIKTRMQT HQGQPGGGIF ENGLRVVKSE 
GILALYKGIA PPLISLSILN TFTFASYSYF QTIFQADRGW DWRNSVAGGV CGPFAATVST
VENLVKTQMQ VDNISKKQFI GSWDCVTKLT RTHGPLILYT GFGINSIREI AFLTTYFGLY
EGLRQTFGDL AGRHPISTWT IPVAGGFAGA ASWFLSFPLD CIRAGVQGQD MSSQRKGSLK
VLWYLMETKG VKGVYGGVSP SIVRAFLVSG SRFSAYEGA