Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_27326 |
Symbol | |
ID | 7200908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 198489 |
End bp | 199631 |
Gene Length | 1143 bp |
Protein Length | 279 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179990 |
Protein GI | 219118435 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000098 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTTATTTCAG TGAAGTTGCG CTGCGAGTCA GCAGCATCGC GGCCACTAAC CTTGTGACTC CTAGTTCCAT TAAACTCTTT TGATCTATTT TCACCTGAAG AAGGCGTTAA TGTAAGGCGA TCACGGAACG TCGTCGATAC TCTTGCCATA CTTACTGTTG ACAACAACCC AGTTTGAACG CTGTAGGGTA CGAAAGAGGT GCGGCAACGG TACCACCTCT GTAGACATCC GCGTACACAT TTCCCTACGA TTTGACTTGT ATTTGCAATT AGGAAAGCAC TAGATAGAGC GATATTTATA TTTTCCATGG TGAGCAAACC ATCTCGAGTA TCTCTTACGG AAGAGGCAGC CGGGGGGTTA TTAGCGGGCA TCGTTGGAAC AGTCATCGGC TTTCCCCTTG ATTTAATCAA AACAAGAATG CAAACTCACC AAGGCCAACC GGGTGGTGGT ATTTTCGAAA ATGGATTACG CGTTGTAAAA TCCGAAGGTA TTTTGGCCCT ATACAAAGGA ATAGCGCCAC CTCTGATTTC ACTATCAATT TTGAACACTT TCACGTTTGC GAGCTACTCC TACTTCCAAA CAATATTTCA GGCTGATAGG GGTTGGGATT GGCGAAACTC AGTAGCTGGT GGAGTTTGTG GTCCGTTTGC TGCCACTGTG TCAACAGTGG AGAATTTAGT AAAGACTCAA ATGCAAGTGG ACAATATCTC GAAAAAGCAG TTTATTGGAT CTTGGGATTG TGTGACGAAG TTGACAAGAA CGCATGGCCC ACTAATACTG TACACCGGTT TCGGAATCAA CTCTATTCGA GAAATTGCGT TCCTTACAAC TTACTTTGGA CTTTACGAAG GTTTGCGACA GACATTTGGG GACCTTGCCG GCAGGCATCC CATAAGCACA TGGACAATTC CAGTCGCTGG AGGTTTCGCG GGTGCCGCTT CCTGGTTTCT GAGTTTCCCA CTGGATTGTA TACGAGCGGG CGTTCAGGGC CAGGATATGT CAAGTCAACG CAAAGGGTCA TTAAAAGTAC TCTGGTATTT GATGGAAACG AAAGGGGTTA AAGGTGTCTA CGGCGGAGTC TCGCCGAGTA TTGTGAGGGC TTTCCTTGTC TCAGGAAGTC GTTTCAGTGC CTATGAAGGT GCA
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Protein sequence | MVSKPSRVSL TEEAAGGLLA GIVGTVIGFP LDLIKTRMQT HQGQPGGGIF ENGLRVVKSE GILALYKGIA PPLISLSILN TFTFASYSYF QTIFQADRGW DWRNSVAGGV CGPFAATVST VENLVKTQMQ VDNISKKQFI GSWDCVTKLT RTHGPLILYT GFGINSIREI AFLTTYFGLY EGLRQTFGDL AGRHPISTWT IPVAGGFAGA ASWFLSFPLD CIRAGVQGQD MSSQRKGSLK VLWYLMETKG VKGVYGGVSP SIVRAFLVSG SRFSAYEGA
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