Gene PHATRDRAFT_27286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_27286 
Symbol 
ID7200878 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand- 
Start bp40431 
End bp41175 
Gene Length745 bp 
Protein Length163 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180162 
Protein GI219118791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0201267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTACCACCTG CATGGCTTAT GAAGGAAGCA AAAAGTCAGC CGGGATCGTA TTATTATTAC 
AATCTCGAAA CGGGCGAATG TACTTGGGAG GAACCCTTTC GTGTCAAGCT TCCAATGGCC 
AATGTAGCAG AACCCCCCAA TTTCGGTTTG AATAACCTCT CATCGGCAAC TGAATCTACC 
ACTAGTGGTA AAAAAAGAAC ATCCGTTGAA ATCAAAGCAG TAAAGATTGA GGATAAAAGC 
GACCGAGATA GCATTAGTCA GAAACGACCA AAGGCTGTCG AGACGAATTC TAATACAGTG 
TCTTCTGATA CAACTGCTTC CATGGATAAG CCCACACACG TTCGCGCTTT GCATATCTTG 
CGTAAACACA AAGACAGTAA GCGACCGAGT TCTTGGCGTG TACCGAAGAT CACTATTTCA 
CGCGAACAAG CTCGCGAAGA ATTGCAGGGT CTACTCGAAA TCTTACAAGA AGAAGCGCAC 
GATATGGGTT CGCTTAAGGC AACCTTTGAA GAACTGGCGA AGGAGGAGTC AGATTGCAGT 
TCCGCTAAAC GGGGTGGGGA TCTAGGAGTT TTCGGACGCG GGAAGATGCG GCCAGAATTT 
GAGCATGCGG CATTCGCCTT GGACGTCGGC CAGTTGAGTG GGCTCATCGA TACCTCCTCT 
GGTGTCCACA TTATTCTTCG GACAGAATAG TTAACAGTTC TCCAATCCAG ACCTCGTTCT 
TTAATGGATC CTGTTGCTAC TCGCA
 
Protein sequence
MKEAKSQPGS YYYYNLETGE CTWEEPFRTN SNTVSSDTTA SMDKPTHVRA LHILRKHKDS 
KRPSSWRVPK ITISREQARE ELQGLLEILQ EEAHDMGSLK ATFEELAKEE SDCSSAKRGG 
DLGVFGRGKM RPEFEHAAFA LDVGQLSGLI DTSSGVHIIL RTE