Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_20331 |
Symbol | PsbO |
ID | 7201024 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 759421 |
End bp | 760679 |
Gene Length | 1259 bp |
Protein Length | 308 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | oxygen-evolving enhancer protein 1 precursor |
Protein accession | XP_002180309 |
Protein GI | 219119085 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TATACCGAAG CAATCTTGAC CATGAAGTTC ACTGCCGCCT GCTCTATTGC CCTCGCTGCT TCGGCTTCGG CCTTTGCCCC GATTCCCTCG GTTAGCGTGA GTTGATTTTG CAGTGGCCAT GATAGGAAAC GGTCGAGAGT TGCAGAGAAC AAAAGCTGTT GAGCATTATG CCCTTTATTT CGTTCTTCGT CTGCGCTGTT TACGTCACAA TGAATTTTAT TGGCAGTAAC TTTTTTGTTG TTGGCTGTAG TGATTTGTGT CTGACAAGTT TCGTTTTCGC CCTTATTGAT ACTGCAGCGT ACCACCGATC TTAGCATGTC TTTGCAAAAG GATCTCGCTA ATGTCGGCAA GGTTGCCGCT GCCGGAGCCC TTGCCTTCGG TCTCGCCACG GCCCCAGCCA ATGCGTTAAC CAAGAGCCAG ATCAATGAGC TCTCCTACTT GCAGGTCAAG GGAACCGGTT TGGCAAACCG CTGCCCGGAA GTCGTCGGAG AAGACAGCAT CACCCCCAAG GGCGGACAAC GTCTCGTCGA TATGTGCATT GAACCCAAGG CCTGGGCTGT AGAAGAGGAA ATTGGCAAGG CTGGGCGCAC CGAAAAGAAG TTTGTCAATT CCAAGGTCAT GACTCGTCAG ACGTACACTC TTGATGGAAT TGAGGGTGCT TTGAAGTCCG AAGGAGGAAG TATCGTCTTC CAGGAACAGG AAGGCATTGA TTATGCTGCC ACTACCGTTC AGCTTCCAGG TGGGGAACGT GTTCCTTTCC TTTTTACCGT CAAAGACTTG GTTGCCAAGG GTAACGGTGG ATCTTTCAAG CCTGGTTTCC AAATGGGAGG CGACTTCAAT ACTCCTTCCT ACCGTACTGG TCTCTTCCTT GATCCCAAGG GACGTGGTGG AACCACCGGA TACGACATGG CTGTTGCCCT TCCTGGTCTT CAATCCGGAG AAGAGGGTGA CGATGACCTT TTCAAAGAGA ACAACAAGAC CTTCGACATC ACTACTGGCC GTATCGAAAT GGAAGTCAAC AAGGTCAATG CGGAAGAGCA GGAAATTGGA GGTGTCTTTG TTGCCACTCA GCTGTCCGAC ACCGATATGG GATCAAAGGT GCCTAAGAAA GTTCTCACTA AGGGTATCTT CTACGCCCGT GTCGAGTAAA CATGTTTCAC TATGCTAGTG CAGCTTTCGA GACGAATTGC GATGGTGACG GTCGACGGTT TAGCTCTAGC CTTTCGTCCC AATAGAACCT CTTTTTCACC ACAATCTTA
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Protein sequence | MKFTAACSIA LAASASAFAP IPSVSRTTDL SMSLQKDLAN VGKVAAAGAL AFGLATAPAN ALTKSQINEL SYLQVKGTGL ANRCPEVVGE DSITPKGGQR LVDMCIEPKA WAVEEEIGKA GRTEKKFVNS KVMTRQTYTL DGIEGALKSE GGSIVFQEQE GIDYAATTVQ LPGGERVPFL FTVKDLVAKG NGGSFKPGFQ MGGDFNTPSY RTGLFLDPKG RGGTTGYDMA VALPGLQSGE EGDDDLFKEN NKTFDITTGR IEMEVNKVNA EEQEIGGVFV ATQLSDTDMG SKVPKKVLTK GIFYARVE
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