| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_20262 |
|---|
| Symbol | CDKA1 |
|---|
| ID | 7200964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | + |
|---|
| Start bp | 494840 |
|---|
| End bp | 498613 |
|---|
| Gene Length | 3774 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180059 |
|---|
| Protein GI | 219118579 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GCAATCTACA TTACAGTGGC AAAAAGCCAA GTATCGACTT CATAATCAGT TCCAGCGGTT
ACCGATATCT ATTTTCTGGT CAAGAAAGGA ACGGTCGTGA TTTCTTGTGG TGATCGGTCT
CGAGCCGCAG TTCGCCACTC TGCCCGGAAC AGACCGGAGA TTCTCCTTGG ACTTACTTTT
TTCACCGTAG AAGTAGACGG ACTTTTGGCG CAAACAAAAA GTTGTACACA AGATGGAGCG
GTATCAAAGG ATGGAAAAGA TTGGGGAGGG TACCTACGGT GTCGTTTACA AGGCCAAAGA
TCGGGTGACG GGCGAAATCA TTGCGCTAAA AAAGATCCGC CTTGAAGCCG AAGATGAAGG
GATTCCGTCG ACTGCTATTA GAGAGATTAG TCTACTCAAA GAACTGCAAC ATCCCAATAT
TGTGAGATTG TATGATGTCG TACATACCGA ACGAAAATTG ACGCTCGTTT TTGAGTTTTT
GGATCAAGAT CTGAAAAAGT ATCTCGATAT TTGTGATGCT GGATTGGAGC TCCCGATTCT
CAAGTCCTTT CTTTATCAAT TATTAACGGG AGGTACGTGT CCCAAAACAG ACCTCACCTC
TTTCGGTGTC TCCGGTTCTT TCCATGCTTG GTCCTCCGAC TTTACCTTAC ACTGTTTTTC
ATTTTCTCTC ATCTCCAAAT GCAGTGGCGT ATTGCCATCA TCACAGGGTA CTGCACCGCG
ATTTGAAGCC CCCTAACTTG CTCATCAACC GTGAAGGAAA TTTAAAACTG GCAGATTTCG
GTTTAGCCAG AGCCTTTGGT ATTCCGGTTC GCTCGTACAC GCACGAAGTC GTTACCCTGT
GGTATCGTTC ACCAGACGTA CTCATGGGTA GTCGAAAGTA CAGTACACCG GTTGATATCT
GGTCGGTTGG TTGCATATTT GCCGAAATGG CGAATGGTCG GCCACTAGTG GCGGGGACAT
CTGAAGCCGA TCAATTGGAT CGAATCTTTC GATTGTTGGG GACACCAAAA CTGGAGGACT
ATCCCACAAT AAACGAACTG CCTGAATACT ATCCCGATAT GCCGCCTTAT CCGCCGCCCC
GGGGTGGATT GTCTGCTCTC GTGCCAAGAC TCAACCCAAT CGGTATTGAT TTGCTGTCCC
GAATGCTTCA GTACGATCCA GCTAGGAGAA TCACGGCCCA GGCCGCCTTA GAACACGAAT
ACTTTCAGGC GGCGTAATGT TGGGACTGGA GTGTCTTCCG TTCATATCGA ATATCAGAAA
AAGTGGCGCG CATATCATTC GTCAGGGGAG GTGCATTGTG CATCTCACTG TCAGTAAAGC
TTTAAATTTT GCCAAAAATT AATTGATTCC CATTTGGTTA TCGTAGAAAA CGCGTAGTGT
CGAGCCGCTC GTTCGTCGCT TGGCTATCAA ACGACGCGGG AGACAACGAC ATATCATCGT
TATACGATAC CGCATTCGAA GTGCCCAAAA GCGGTGCCGA TTCGTCAGTA TTAGACCGTG
CTCCTCTCGA GCTTGATGCA GTTGCCAACG TGGACGATAG AGGTCGAAGG AGGAGTTGAC
GAAGCGAGCT GCTGCTTTGA TGGACTGAGT GGTAAGATGG ATGAGGTGGA GCAGTGTCGT
GTATACCTCC TTCGACGGCA GCGTCACCAG TTCTACTATT TTCGTCCGCG GTGGCGGCAT
TAGAAACGGA AGTGACAGTT GTATCTTCTC GTGACCGTCT CTTGCGCGGT TTTTTGCCGA
CATCTTGACG ACATACGGGA CAATTACAGG GGTTTCCGCA GCCGGAATGT ACCCAGGATT
TCCAACAGCT CTCGCAAAAA ATGTGACCAC ACCGTAGAAT TTTTGTGCGT TTACCGTCTG
GTCCTCGTAG TGGAACGCCG TAATTGTCCA CGACAGCTGT TTTGAACAAC GAGCTCTCCT
CTTTGGCGGT TTTCTTTTTC CCGTCGATAT TTTCATCACA TTCACCGGGC GGAATGTCAA
GCGTCTTTAG ATCCTTGGTA CTGTTCACTC GACTCCCGGT GTAACTGTCA CCGTATTCGA
ACGGCTCCAA GCATATTGGA CAATCCCGTG TCCGATATTC CTGCTGCAGC ATGCACGCCT
TTTCTCGCTC TACATCGGAC AAGAGCGATC GTTGTTCAGC GTACTGCCAC CGTTTGCGCC
GATCCCGGTA CTCTCCCCAC GCCCCAAAGA AAAAGGTGAA TAAGGCAAAG GCAATCACAA
TGCCGAATCT TGAAAGAAAA TCTTGCAGTC GATCCGAAAG TGTGGGGGGT CCGGCGAGGA
GCAAGTCACG AATGTCGTCC ATGGCTTGGA GGAGGGCATC GCCGTATTCA CGCGTGCGCA
AGAACGGCTT CATGCCGGCA ACGACGTGAT CGAGTCTCCA CCAGGGCAAG ATACTGGATA
TTTCCGTTCC GGTACTAATA AAACAAACGC GATCTTGAAT AGAAAGAAAG AGCAATATAC
CATGATCCCC ATGGTCACCT TTCTTCCACC AGGCATCGTG AAGATTGTGT GCAAAGATCT
GAGCCGCGTC GTTCACCATG TCGTCTTCGT CCTCGTAGGC GTAGTAGGAT CCTTCTCGCA
AAACTGCGGG CAAATTCATC TTGCGCACCG TAGCTACAGC GAGTTCAACG GCTGGGATTC
GAATATTGGA TTGGGAGAAA GCATCCATAT CATCCGTCAG AGCCCGCTTA CTACGGTGAC
GTTGCTGGAA CGCTGCCCAA GAGATGGACG ACAAATCCCG TTCTTGTACA TACGGCGTAC
TCGACAAGCG CCGGTTGAAA GGACCTACGG TGACATCCCA GGGTCGATCG TTGTCCGTGT
CGCCGTCGTG GGGTCCGAAG ATGTTAGAAA AATTCATCAA CTTCTGCGCG ATTTCCTCCA
AATATTCTCC GCCCATGACC CAGTCGGGAT CGCACACTCG CAAGTCGTTG ACGGTTAAAT
TAGGCTTGTT CTGTAAATAG GCAATTCCAC AGCGAATGGG GTTGTTGATA GGATTGGGGT
ACATGTCCGG CGTCCAACCG TACACGGTGG GGTTGCTGTT GTGGGGTTGG TTGTCCGCGT
CCCGGCTATC CGTGTCGGGT TCCGGATCGA AAGTGTCGTC GGAGTGGTCC GTGAGAAACA
CGTGCTGGGT CGTTGTTGAT ATAGATGTCG ATACCGGAGG AAACTGTTGG TGTAAAGTAG
GATCTTCCGA ATGAATGAAA CCTTTCTGCG TCAGAGACGG CTGAAAGTAA CTCGACCAAG
AATTCCGATG TTCTAATGGT CGTTTCTCGG TGGCTTTGGG GTTGCGATCG TGAACGTCTT
CCAGCACAGA TACTTCCCGA AACGCAGTGA CCACGGGCCG AGAAGGGATC CGGGAATTCT
CGTGGAGATT CCAAAAGAAA CAGCCCCAAA CGGCGGCCAA GACGGCACAC GAACCCCCGC
ACAACCAGAA GTGTATCGAA CGCCCCGCAC GACGCCTCCG CGCGCGTCGC ATGGAATCTT
GTAGTGAATG GGCACGTAAA TAGGGGCGCT CTACCACGGA ATGGGTCGAT CCTTCTATTG
GGGATGATAT AGTGGGTATT GTGGAAGGTT CTGACGGAAA GGGTGGTACA GAAAACGATA
CGAACCCATG TTCGGGTCGA TTGTTCGTAG AGGTTTGATG CATGACGACG TTCAGGAACA
GTGACCTCGA TTCCTCATGC AGCAGATTGT TAAAGGAACA ACGGGGATGA GTAAACTGTA
ATAAAATGCG AACGACGGTG CTTTAATGGA ATGAAAGGAT GAGAAGAGAA CCGT
|
|---|
| Protein sequence | MERYQRMEKI GEGTYGVVYK AKDRVTGEII ALKKIRLEAE DEGIPSTAIR EISLLKELQH
PNIVRLYDVV HTERKLTLVF EFLDQDLKKY LDICDAGLEL PILKSFLYQL LTGVAYCHHH
RVLHRDLKPP NLLINREGNL KLADFGLARA FGIPVRSYTH EVVTLWYRSP DVLMGSRKYS
TPVDIWSVGC IFAEMANGRP LVAGTSEADQ LDRIFRLLGT PKLEDYPTIN ELPEYYPDMP
PYPPPRGGLS ALVPRLNPIG IDLLSRMLQY DPARRITAQA ALEHEYFQAA
|
|---|
| |