| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_20227 |
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| Symbol | RPN11 |
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| ID | 7200819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | + |
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| Start bp | 358004 |
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| End bp | 359119 |
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| Gene Length | 1116 bp |
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| Protein Length | 311 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | regulatory proteasome non-atpase subunit 11 |
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| Protein accession | XP_002180023 |
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| Protein GI | 219118504 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TACCACAATT GGTGCATCGC TTGTTCCCGA ACAGTGAGAG TCCTTGCACT TCGAAACTCA
CAACAAGTAG TCGCAGTAGA AGCGGCAGTA GCGCTACAGA ACTGCCAAGA AGTGCGGAAA
GTATGGAACG CTTACAGAAC CTGATTCGTA GTATGCCCAA CGGGATGGGC GGTGACGGTC
CGGGCGCCGA CGTGCCTCTT GCGGATTGTG CCGAAAAGAT TCACGTCTCG TCCCTCGCGT
TACTTAAAAT GCTGAAACAC GGACGCGCCG GAGTGCCTAT GGAAGTCATG GGACTCATGC
TGGGTGAATT CGTGGACGAT TACACCATTA ATTGCGTCGA CGTTTACGCC ATGCCGCAAT
CCGGAACCAC GGTTTCTGTG GAAGACATCG ATCCGGTCTT TCAGACCGAA ATGACGGCCA
TGTTGAGGCA AACGGGGCGT CCCGAAGACG TCGTCGGGTG GTACCATTCG CATCCCGGCT
TTGGTTGCTG GTTGTCGAGT ACCGATATCA ATACGCAGAC CGCCTTTGAA CTGCTCCACC
CCCGCTGCGT GGCGCTCGTC GTGGATCCCA TTCAATCCGT CAAGGGCAAA GTCGTCATTG
ACTGCTTTCG CCTCATTAAT CCACAAGCAC TCATGATGGG ACAAGAACCT CGTCAGAGTA
CCTCCAATAT CGGGCATTTG CAAAAACCCT CGATCCAAGC CTTGATACAC GGATTGAACC
GACACTACTA CAGTATCGTT ATCGATTACC GCAAAAATGA GCTGGAAGAA CAAATGCTGG
GAATGCTACA CAAGCGCAAT TGGGCGTCTT CGCTGCAAGT GGAGCCCTTT GAAAAGCACG
ACGCAACGTC CAATGACCTG CTGTCCCGTA TGCTCAAGTT GACGCAAACC TACAACGAAC
GGGTACAGGA AGAACAGGGC AAAACGGAAG CACAAGTGTT GGTCGATAAC GTGGGAAAAG
TCGACCCCAA ACGACACTTA CAAGCGTCCG TGACGGAACT CATGAACGTC AATATCATCC
AATGCCTAGG AACCATGCTG GATACGGTGG TATTCTAGTA TTCCATCCAA AAATGCGGAA
TAGTAACATA AAACGTTCCT TACACCAAAC CACTGT
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| Protein sequence | MERLQNLIRS MPNGMGGDGP GADVPLADCA EKIHVSSLAL LKMLKHGRAG VPMEVMGLML
GEFVDDYTIN CVDVYAMPQS GTTVSVEDID PVFQTEMTAM LRQTGRPEDV VGWYHSHPGF
GCWLSSTDIN TQTAFELLHP RCVALVVDPI QSVKGKVVID CFRLINPQAL MMGQEPRQST
SNIGHLQKPS IQALIHGLNR HYYSIVIDYR KNELEEQMLG MLHKRNWASS LQVEPFEKHD
ATSNDLLSRM LKLTQTYNER VQEEQGKTEA QVLVDNVGKV DPKRHLQASV TELMNVNIIQ
CLGTMLDTVV F
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