Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12544 |
Symbol | |
ID | 7200818 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 354590 |
End bp | 355432 |
Gene Length | 843 bp |
Protein Length | 258 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180219 |
Protein GI | 219118905 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0211036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTGAAAAGG CCTTGGGCGC TAACGGAACG GGTTTGATCG CGATACGAAA CGTACCCGGC TTTGTGGAGG CCAAACAGGC TTTTTTACCG CGGGCTCACG ACCTTGTCCA GTTACCCTCC TCCCAACTGC TCGCTTTGGA AGATCCCGTA TCTCTGTACA ACGCTGGTTG GTCGCACGGA AAGGAACGCA TGGGGGATAC CCCCGATTTT GCCAAGGGAA GTTACTACTA CAATCCGGTC ACGGATTGTC CCGGTAGTGC CGCGGATCGT CAAGCCTATC CGGTATCCTA TCCGTGCAAC GTGTGGCCGG CCGAAGCCAG TCTCCCCCAC TTTCAAACAC AAGCCAACAC GATGGGTGCC ATTTTGAAAG ACACGGTGGT GGCCTTGGCG CGACATATTG ACCAACTGGC GGCCCAAAAG GTCCCGGACT ATCCACAAGA TTTCTTGTAT ACGCACATGC AAGCGACGGA GAAGGTCAAG GCCCGCTTGC TCTACTACTT TCCACTCACA GTCACCGACG TCCAAAGGGA CGGCAACGAG CCGAGCAACG GTACTCTCCA TGCGGAAACG CCCGCACAGA ATATGAGTCG TGAAGATTCC TGGATTGGTT GGCACAACGA CAGTGGCTTC TTTACCGCCC TCGCCGGGGA CCTATACGTC GATCACGAAA CGGGACAAGT CCTGGACCAA TCCCCCGATC CCGCTGCCGG TTTGTACGTC ATTCACCGCT CCGGCCAAAC TCAAAAGGTA AACATTCCAC CGGACTGTGT GGCGGTACAG ATGGGTGAGT GCTTGCAAAT TGTCACCGGC GGAGCGGTGA CAGCCACACC TCATTGTGTG CGC
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Protein sequence | LEKALGANGT GLIAIRNVPG FVEAKQAFLP RAHDLVQLPS SQLLALEDPV SLYNAGWSHG KERMGDTPDF AKGSYYYNPV TDCPGSAADR QAYPVSYPCN VWPAEASLPH FQTQANTMGA ILKDTVVALA RHIDQLAAQK VPDYPQDFLY THMQATEKVK ARLLYYFPLT NMSREDSWIG WHNDSGFFTA LAGDLYVDHE TGQVLDQSPD PAAGLYVIHR SGQTQKVNIP PDCVAVQMGE CLQIVTGGAV TATPHCVR
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