Gene PHATRDRAFT_12544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12544 
Symbol 
ID7200818 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp354590 
End bp355432 
Gene Length843 bp 
Protein Length258 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180219 
Protein GI219118905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0211036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTGAAAAGG CCTTGGGCGC TAACGGAACG GGTTTGATCG CGATACGAAA CGTACCCGGC 
TTTGTGGAGG CCAAACAGGC TTTTTTACCG CGGGCTCACG ACCTTGTCCA GTTACCCTCC
TCCCAACTGC TCGCTTTGGA AGATCCCGTA TCTCTGTACA ACGCTGGTTG GTCGCACGGA
AAGGAACGCA TGGGGGATAC CCCCGATTTT GCCAAGGGAA GTTACTACTA CAATCCGGTC
ACGGATTGTC CCGGTAGTGC CGCGGATCGT CAAGCCTATC CGGTATCCTA TCCGTGCAAC
GTGTGGCCGG CCGAAGCCAG TCTCCCCCAC TTTCAAACAC AAGCCAACAC GATGGGTGCC
ATTTTGAAAG ACACGGTGGT GGCCTTGGCG CGACATATTG ACCAACTGGC GGCCCAAAAG
GTCCCGGACT ATCCACAAGA TTTCTTGTAT ACGCACATGC AAGCGACGGA GAAGGTCAAG
GCCCGCTTGC TCTACTACTT TCCACTCACA GTCACCGACG TCCAAAGGGA CGGCAACGAG
CCGAGCAACG GTACTCTCCA TGCGGAAACG CCCGCACAGA ATATGAGTCG TGAAGATTCC
TGGATTGGTT GGCACAACGA CAGTGGCTTC TTTACCGCCC TCGCCGGGGA CCTATACGTC
GATCACGAAA CGGGACAAGT CCTGGACCAA TCCCCCGATC CCGCTGCCGG TTTGTACGTC
ATTCACCGCT CCGGCCAAAC TCAAAAGGTA AACATTCCAC CGGACTGTGT GGCGGTACAG
ATGGGTGAGT GCTTGCAAAT TGTCACCGGC GGAGCGGTGA CAGCCACACC TCATTGTGTG
CGC
 
Protein sequence
LEKALGANGT GLIAIRNVPG FVEAKQAFLP RAHDLVQLPS SQLLALEDPV SLYNAGWSHG 
KERMGDTPDF AKGSYYYNPV TDCPGSAADR QAYPVSYPCN VWPAEASLPH FQTQANTMGA
ILKDTVVALA RHIDQLAAQK VPDYPQDFLY THMQATEKVK ARLLYYFPLT NMSREDSWIG
WHNDSGFFTA LAGDLYVDHE TGQVLDQSPD PAAGLYVIHR SGQTQKVNIP PDCVAVQMGE
CLQIVTGGAV TATPHCVR