Gene PHATRDRAFT_12535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12535 
Symbol 
ID7200762 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp54400 
End bp54802 
Gene Length403 bp 
Protein Length72 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180165 
Protein GI219118797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCGA TTTTCGATTT TTCTTCGCTC GTGACGGTAT TGCTATTGCT TATTTGCACA 
TGCACATATC TTCGAGAATT GCGGCCAGGT ATTTTTGATG GTCCACCGCC CAAGGTCAGT
TAGCGCACAG TCGAATTAAA ATTGTTCACT GTCAGTGGAA ACGATTCATT TTCAACGGCG
TTTTATCTCA ATCTCTTTGG CAATTTTTCG TTCCTTCCGT TATATTCTGC GAGCGCAGGT
GGACACATCG GATCCTAACG CGGCTAAAGG ACACAGTAAG GTAGCCGCAC GGGAGGGCTT
TTGGGGATTT TTGTGGAAGC TATCTCGCGT AGGCGAGCGA TTGAGCCCGT ATGTTGGAGC
CGGGTGTGCA CTCATGGCCG TTCACATTCT ATTTTTCAAG TAG
 
Protein sequence
MSAIFDFSSL VTVLLLLICT CTYLRELRPG IFDAAREGFW GFLWKLSRVG ERLSPYVGAG 
CALMAVHILF FK