| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_12523 |
|---|
| Symbol | |
|---|
| ID | 7200787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | + |
|---|
| Start bp | 209819 |
|---|
| End bp | 210640 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179991 |
|---|
| Protein GI | 219118437 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.129345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCAGCGGGCA TCGTTGGAAC AGTCATCGGC TTTCCCCTTG ATTTAATCAA AACAAGAATG
CAAACTCACC AAGGCCAACC GGGTGGTGGT ATTTTCGAAA ATGGATTACG CGTTGTAAAA
TCCGAAGGTA TTTTGGCCCT ATACAAAGGA ATAGCGCCAC CTCTGATTTC ACTATCAATT
TTGAACACTT TCACGTTTGC GAGCTACTCC TACTTCCAAA CAATATTTCA GGCTGATAGG
GGTTGGGATT GGCGAAACTC AGTAGCTGGT GGAGTTTGTG GTCCGTTTGC TGCCACTGTG
TCAACAGTGG AGAATTTAGT AAAGACTCAA ATGCAAGTGG ACAATATCTC GAAAAAGCAG
TTTATTGGAT CTTGGGATTG TGTGACGAAG TTGACAAGAA CGCATGGCCC ACTAATACTG
TACACCGGTT TCGGAATCAA CTCTATTCGA GAAATTGCGT TCCTTACAAC TTACTTTGGA
CTTTACGAAG GTTTGCGACA GACATTTGGG GACCTTGCCG GCAGGCATCC CATAAGTACA
TGGACAATTC CAGTCGCTGG TGGTTTCGCG GGTGCCGCTT CCTGGTTTCT GAGTTTCCCA
CTGGATTGTA TACGAGCGGG CGTTCAGGGC CAGGATATGT CAAGTCAACG CAAAGGGTCA
TTAAAAGTAC TCTGGTATTT GATGGAAACG AAAGGGGTTA AAGGTCTCTA CAGCGGAGTC
TCGCCGAGTA TTGTGAGGGC TTTCCTTGTC TCAGGAAGTC GTTTCAGTGC CTATGAAGGT
GCATTATGGC TTCTGCGTGG AGGGCGCGAT GTCCAGCATT AA
|
|---|
| Protein sequence | SAGIVGTVIG FPLDLIKTRM QTHQGQPGGG IFENGLRVVK SEGILALYKG IAPPLISLSI
LNTFTFASYS YFQTIFQADR GWDWRNSVAG GVCGPFAATV STVENLVKTQ MQVDNISKKQ
FIGSWDCVTK LTRTHGPLIL YTGFGINSIR EIAFLTTYFG LYEGLRQTFG DLAGRHPIST
WTIPVAGGFA GAASWFLSFP LDCIRAGVQG QDMSSQRKGS LKVLWYLMET KGVKGLYSGV
SPSIVRAFLV SGSRFSAYEG ALWLLRGGRD VQH
|
|---|
| |