Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12501 |
Symbol | |
ID | 7200965 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 506791 |
End bp | 507663 |
Gene Length | 873 bp |
Protein Length | 238 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180250 |
Protein GI | 219118967 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.245496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAACACGAAG CCTTTCCCGA CTTGATTTGT ACGATTGGAG GCGACGGACT ACTCATGCAC GCTGCCATGT TGTTTCAGGG CCCGATTCCA CCAATACTGG CAGTCGCCGG CGGCAGCCTA GGGTTTCTCA CCCCCTTTAG CAAAGAAGAA ATGGTGGACG CCATTCGTGT GTCGTTGGGA ATGCTGCAGC TGGACGGTGC CACGGCCACG AAAAACTCGG CCTTGGTGCA GGCGGGCGAC ACCAAAGTTT TCCCGCCCAA TATGCCCTCC TATCCCTACG AACCCTTGCT GCGACATCCG CAATTGCGTT GTTTTGGCTA CGACAGTCGT ATTTGTTTAT CGATCCGCAT GCGCTTGGAA TGCCGAATTC TGAATGGACA AGGCGCCGTC CGCGCCCGTT ACAACGTCCT CAACGAAGTC GTTATTGATC GCGGTTCCAG TCCGTACTTG GCCGCCTTGG AATGTTTCTG TGATGATGTT CACTTGACGA CGGTCCAAGC CGACGGTATA ATTTTTGCTA CTCCAACGGG CTCGACAGCC TACAGCATGG CCGCCGGTGG TTCCGTGGTC CACCCAGCCG TACCCGCTAT TTTAGTCACC CCAATTTGTC CGCATGTACT CTCCTTTCGA TCCATGGTCT TTCCCGATCA CGTTGTGTTG CGGTGTTACG TTCCTGACGA CGCCCGTGCC GAAGCATCGG TGGCCTTTGA TGGCAAACAC CGACAAGAAT TACACCGTGG CGATTCGGTA CAGATCCAAA TGAGTGCGTA CCCCGTTCCA ACGATCAACC GGATGGATCA TTCGTCGGAT TGGTTGGGGT CGTTAAAACA AAACTTTAAT TTCAATACGC GACCTCGACA GCGACCGTTA TGA
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Protein sequence | EHEAFPDLIC TIGGDGLLMH AAMLFQGPIP PILAVAGGSL GFLTPFSKEE MVDAIRVRIC LSIRMRLECR ILNGQGAVRA RYNVLNEVVI DRGSSPYLAA LECFCDDVHL TTVQADGIIF ATPTGSTAYS MAAGGSVVHP AVPAILVTPI CPHVLSFRSM VFPDHVVLRC YVPDDARAEA SVAFDGKHRQ ELHRGDSVQI QMSAYPVPTI NRMDHSSDWL GSLKQNFNFN TRPRQRPL
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