Gene PHATRDRAFT_12501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12501 
Symbol 
ID7200965 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp506791 
End bp507663 
Gene Length873 bp 
Protein Length238 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180250 
Protein GI219118967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.245496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAACACGAAG CCTTTCCCGA CTTGATTTGT ACGATTGGAG GCGACGGACT ACTCATGCAC 
GCTGCCATGT TGTTTCAGGG CCCGATTCCA CCAATACTGG CAGTCGCCGG CGGCAGCCTA
GGGTTTCTCA CCCCCTTTAG CAAAGAAGAA ATGGTGGACG CCATTCGTGT GTCGTTGGGA
ATGCTGCAGC TGGACGGTGC CACGGCCACG AAAAACTCGG CCTTGGTGCA GGCGGGCGAC
ACCAAAGTTT TCCCGCCCAA TATGCCCTCC TATCCCTACG AACCCTTGCT GCGACATCCG
CAATTGCGTT GTTTTGGCTA CGACAGTCGT ATTTGTTTAT CGATCCGCAT GCGCTTGGAA
TGCCGAATTC TGAATGGACA AGGCGCCGTC CGCGCCCGTT ACAACGTCCT CAACGAAGTC
GTTATTGATC GCGGTTCCAG TCCGTACTTG GCCGCCTTGG AATGTTTCTG TGATGATGTT
CACTTGACGA CGGTCCAAGC CGACGGTATA ATTTTTGCTA CTCCAACGGG CTCGACAGCC
TACAGCATGG CCGCCGGTGG TTCCGTGGTC CACCCAGCCG TACCCGCTAT TTTAGTCACC
CCAATTTGTC CGCATGTACT CTCCTTTCGA TCCATGGTCT TTCCCGATCA CGTTGTGTTG
CGGTGTTACG TTCCTGACGA CGCCCGTGCC GAAGCATCGG TGGCCTTTGA TGGCAAACAC
CGACAAGAAT TACACCGTGG CGATTCGGTA CAGATCCAAA TGAGTGCGTA CCCCGTTCCA
ACGATCAACC GGATGGATCA TTCGTCGGAT TGGTTGGGGT CGTTAAAACA AAACTTTAAT
TTCAATACGC GACCTCGACA GCGACCGTTA TGA
 
Protein sequence
EHEAFPDLIC TIGGDGLLMH AAMLFQGPIP PILAVAGGSL GFLTPFSKEE MVDAIRVRIC 
LSIRMRLECR ILNGQGAVRA RYNVLNEVVI DRGSSPYLAA LECFCDDVHL TTVQADGIIF
ATPTGSTAYS MAAGGSVVHP AVPAILVTPI CPHVLSFRSM VFPDHVVLRC YVPDDARAEA
SVAFDGKHRQ ELHRGDSVQI QMSAYPVPTI NRMDHSSDWL GSLKQNFNFN TRPRQRPL