Gene PHATRDRAFT_12456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12456 
SymbolFru5_2 
ID7200756 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp24970 
End bp26139 
Gene Length1170 bp 
Protein Length283 aa 
Translation table 
GC content54% 
IMG OID 
Productfrustulin 5 
Protein accessionXP_002179960 
Protein GI219118371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.240417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCCTTGAAGA TCTGCCAAGG TGACTGTGAT AAGGACAGTG ACTGCGAAGG AAGTCTAAAA 
TGCTTCATGA GAGATGGAGG TGAGGCCGTA CCCGGTTGCA GTGGAGGTGA GGACGTGGCC
AGTCGTGCGG ACTTTTGCTA CGATCCAATG CCCACTACTT CTCCTGTCGC AATGGCCACT
ACTTCTCCTG TCGCAATGGC CACTACTTCT CCTGTCGCAA TGGCCACTTC TTCTCCTGTC
ACAATGGCCA CTTCTTCTCC TGTCACAATG GCCACGTCTT CTCCTGTCAC AATGGCCACT
TCTTCTCCTG TCACAATGGC CACGTCCTCT CCTGTCGCAA AGCCCACGTC TTCTCCTGTC
ACAATGGCCA CGTCTTCTCC TGTCACAATG GCCACTTCTT CTCCTGTCGC AAAGCCCACG
TCTTCTCCTG TTGCAAAGCC CACATCATCT CCTGTTGCAA TGGCCACTTC TTCTCCTGTC
GCAATGGCCA CTTCTTCTCC TGTCGCAAAG CCCACGTCTT CTCCTGTTAC AATGGCCACA
TCATCTCCTG TTGCAAAACC CACATCATCT CCTGTTACAA AGCCCACATC ATCTCCTGTT
GCAAAACCCA CATCATCTCC TGTTGCCATG CCCACGTCTT CTCCTGTTGC AACGCCCACT
GCTGGGGGAC CCAGTGTGGT AGTTGTTGGA GACAATGGTA CACCCTCATC TGCTTTTCCC
TTGAAGATCT GCCAAGGTGA CTGTGACAAG GACAGCGACT GCGAAGGAAG TTTAAAGTGC
TTCATGAGAG ATGGAGGTGA GGCCGTACCC GGTTGCAGTG GAGGTGAGGA CGTGGCCAGT
CGTGCGGACT TTTGCTACGA TCCAATGCCC ACGTCTTCTC CTGTTGCAAT GCCCTCTGCT
GGGGGACCCA GTGTGGTAGT TGTGGGAGAC AATGGTACAC CCTCGTCTGC TTATCCCTTG
AAGGTCTGCC AAGGTGACTG TGATAAGGAC AGTGACTGCG AAGGAAGTCT AAAATGCTTC
ATGAGAGACG GAGGTGAGGC CGTACCCGGT TGCAGTGGAG GTGAGAGTGT GGCCAGTCGT
GCGGACTTTT GCTACAATCC AATGCCCACT ACTTCTCCTG TCGCAATGGC CACTTCTTCT
CCTGTCGCAA TGGCCACGTC TTCTCCTGTT
 
Protein sequence
PLKICQGDCD KDSDCEGSLK CFMRDGGEAV PGCSGGEDVA SRADFCYDPM PTTSPVAMAT 
TSPPTSSPVT MATSSPVAKP TSSPVTKPTS SPVAKPTSSP VAMPTSSPVA TPTAGGPSVV
VVGDNGTPSS AFPLKICQGD CDKDSDCEGS LKCFMRDGGE AVPGCSGGED VASRADFCYD
PMPTSSPVAM PSAGGPSVVV VGDNGTPSSA YPLKVCQGDC DKDSDCEGSL KCFMRDGGEA
VPGCSGGESV ASRADFCYNP MPTTSPVAMA TSSPVAMATS SPV