Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12405 |
Symbol | |
ID | 7201041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 828920 |
End bp | 829822 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180128 |
Protein GI | 219118722 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.390434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCGG AAGTCGTGCG AGATTTCATT GCCGGATCAG TCGGTGGCTT TGCCGGAAAG TTGTTCGATT ACCCTCTGGA CACGGTCAAA GTTCTACTGC AAACTCAAGG GGAATCACTT CCAGCTGCAT CGGTAGCCCA AATGTCAAAG AAAAAAATGT ACCGCGGAGC GTGGGATTGC TTGCAAAAGA CGGTGGAAGC GAAGGGAGTG TTGTCCTTGT ATAAAGGTAT TTCGTCGCCG CTTTTGGGCT GCATGGCCGA GAATGCCGTT TTGTTTTGGG CGTACAACAA ATTCAAGAAA GTGATCAGTG GCTCTACCGA TGAATCGAAC GTACCAATTA TAAAGCTATC AATAGCGGGT GCAGGAGCTG GTGCAGTCGT ATCTTTTGTG CTCACACCAG TGGAGCTGGT AAAATGTCGA CTACAAGTGC AAAACGCTTC GAACGGGAAT TTCAGAGCCT TTACAGGGCC AATCGATGTG ATCGTGCAGA CAGTGAAAAG TGAAGGCATT GTACGAGGCC TCTTTCGCGG TCATCTATCA ACAATGTACC GAGAAATTCC CGGAAATTTT TGCTATTTCG GAACTTACGA ACTTGTATGC ACAGCGATGA CCCCCGAAGG GGGTTCGAAG AGTGACTTGA GTATGCCTAC ACACTTATTG GGAGGTGTGC TGAGTGGAAT AACTTACTGG ACTGCATTTT TCCCCGCAGA CACAGTCAAG TCGCTGATGC AGACACGACC AGATTACGGC GACCGTACAT TTACGGATGT TTTCAAGGCT ATCTACCGAT CCGAGGGTGT AGCTGGTCTA TACAGAGGGT GGGGCATTAC TGTTGCCCGT GGAGCACCGG CCAACGCTCT CATTTTTGCA GGCTACGAAT ACACGTCGAA AATGCTGAGG TGA
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Protein sequence | MASEVVRDFI AGSVGGFAGK LFDYPLDTVK VLLQTQGESL PAASVAQMSK KKMYRGAWDC LQKTVEAKGV LSLYKGISSP LLGCMAENAV LFWAYNKFKK VISGSTDESN VPIIKLSIAG AGAGAVVSFV LTPVELVKCR LQVQNASNGN FRAFTGPIDV IVQTVKSEGI VRGLFRGHLS TMYREIPGNF CYFGTYELVC TAMTPEGGSK SDLSMPTHLL GGVLSGITYW TAFFPADTVK SLMQTRPDYG DRTFTDVFKA IYRSEGVAGL YRGWGITVAR GAPANALIFA GYEYTSKMLR
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