Gene PHATRDRAFT_12405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12405 
Symbol 
ID7201041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp828920 
End bp829822 
Gene Length903 bp 
Protein Length300 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180128 
Protein GI219118722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.390434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCGG AAGTCGTGCG AGATTTCATT GCCGGATCAG TCGGTGGCTT TGCCGGAAAG 
TTGTTCGATT ACCCTCTGGA CACGGTCAAA GTTCTACTGC AAACTCAAGG GGAATCACTT
CCAGCTGCAT CGGTAGCCCA AATGTCAAAG AAAAAAATGT ACCGCGGAGC GTGGGATTGC
TTGCAAAAGA CGGTGGAAGC GAAGGGAGTG TTGTCCTTGT ATAAAGGTAT TTCGTCGCCG
CTTTTGGGCT GCATGGCCGA GAATGCCGTT TTGTTTTGGG CGTACAACAA ATTCAAGAAA
GTGATCAGTG GCTCTACCGA TGAATCGAAC GTACCAATTA TAAAGCTATC AATAGCGGGT
GCAGGAGCTG GTGCAGTCGT ATCTTTTGTG CTCACACCAG TGGAGCTGGT AAAATGTCGA
CTACAAGTGC AAAACGCTTC GAACGGGAAT TTCAGAGCCT TTACAGGGCC AATCGATGTG
ATCGTGCAGA CAGTGAAAAG TGAAGGCATT GTACGAGGCC TCTTTCGCGG TCATCTATCA
ACAATGTACC GAGAAATTCC CGGAAATTTT TGCTATTTCG GAACTTACGA ACTTGTATGC
ACAGCGATGA CCCCCGAAGG GGGTTCGAAG AGTGACTTGA GTATGCCTAC ACACTTATTG
GGAGGTGTGC TGAGTGGAAT AACTTACTGG ACTGCATTTT TCCCCGCAGA CACAGTCAAG
TCGCTGATGC AGACACGACC AGATTACGGC GACCGTACAT TTACGGATGT TTTCAAGGCT
ATCTACCGAT CCGAGGGTGT AGCTGGTCTA TACAGAGGGT GGGGCATTAC TGTTGCCCGT
GGAGCACCGG CCAACGCTCT CATTTTTGCA GGCTACGAAT ACACGTCGAA AATGCTGAGG
TGA
 
Protein sequence
MASEVVRDFI AGSVGGFAGK LFDYPLDTVK VLLQTQGESL PAASVAQMSK KKMYRGAWDC 
LQKTVEAKGV LSLYKGISSP LLGCMAENAV LFWAYNKFKK VISGSTDESN VPIIKLSIAG
AGAGAVVSFV LTPVELVKCR LQVQNASNGN FRAFTGPIDV IVQTVKSEGI VRGLFRGHLS
TMYREIPGNF CYFGTYELVC TAMTPEGGSK SDLSMPTHLL GGVLSGITYW TAFFPADTVK
SLMQTRPDYG DRTFTDVFKA IYRSEGVAGL YRGWGITVAR GAPANALIFA GYEYTSKMLR