Gene PHATRDRAFT_12394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12394 
Symbol 
ID7200835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp776705 
End bp777487 
Gene Length783 bp 
Protein Length260 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180313 
Protein GI219119093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.358412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCAGC ACGAACATAT GGAACGCCAC GCCAAGCTTC ACGGCCGTCG GTTCGACGCC 
GAGGAGCGTG AGCGCAAAAA GGAAGCGCGT ATGGTGCACA AGCGCTCCGA ATTTGCCCAA
AAAGTACACG GTATTCGGGC GAAACTCTAC CAAAAGAAGC GGTTCAAGGA AAAGGCCACC
ATGCGCAAAA CGATCGCGAT GCACAACGAA CGCAACAACA AACACGCGGA CGACGATGCC
GTCGCCGATG GGGCCGTACC GGCCTATTTG TTAGACCGTC AAGGTGTCTC CCGTGCCAAG
GTTTTGTCGA ATACGATTAA GCAAAAGCGG AAAGAAAAGG CCGGAAAATG GGAAGTGCCC
ATTCCCAAGG TCAAGCCGGT AGCCGATGAC GAAATGTTCA AAGTCATGCG GACCGGTAAG
AAACAGAACA AGGCGTGGAA GCGTGTGGTT ACCAAATGCA CCTTTGTAGG AGACTCTTTT
ACCCGGAAAG CTCCCAAATA CGAACGCTTT ATTCGACCCA GCGGGTTGCG AATGCGCAAA
GCCAACGTCA CACATCCCGA ACTCAAAACA ACGTTTCAAC TGGACATTCT CGGAGTCAAG
AAAAATCCCA GCAGTCAAAT ATATACAAAT TTGGGAGTAC TTACGAAAGG AACAATCTTG
GAAGTCAACG TTAGTGAATT GGGTTTGGTC ACCACTACGG GTAAAGTGGC TTGGGGAAAG
ATGGCACAGG TTACCAACAA CCCCGAACTA GACGGTTGCG TCAATGCCGT TTTGTTAGTG
TAA
 
Protein sequence
MPQHEHMERH AKLHGRRFDA EERERKKEAR MVHKRSEFAQ KVHGIRAKLY QKKRFKEKAT 
MRKTIAMHNE RNNKHADDDA VADGAVPAYL LDRQGVSRAK VLSNTIKQKR KEKAGKWEVP
IPKVKPVADD EMFKVMRTGK KQNKAWKRVV TKCTFVGDSF TRKAPKYERF IRPSGLRMRK
ANVTHPELKT TFQLDILGVK KNPSSQIYTN LGVLTKGTIL EVNVSELGLV TTTGKVAWGK
MAQVTNNPEL DGCVNAVLLV