Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12394 |
Symbol | |
ID | 7200835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 776705 |
End bp | 777487 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180313 |
Protein GI | 219119093 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.358412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCAGC ACGAACATAT GGAACGCCAC GCCAAGCTTC ACGGCCGTCG GTTCGACGCC GAGGAGCGTG AGCGCAAAAA GGAAGCGCGT ATGGTGCACA AGCGCTCCGA ATTTGCCCAA AAAGTACACG GTATTCGGGC GAAACTCTAC CAAAAGAAGC GGTTCAAGGA AAAGGCCACC ATGCGCAAAA CGATCGCGAT GCACAACGAA CGCAACAACA AACACGCGGA CGACGATGCC GTCGCCGATG GGGCCGTACC GGCCTATTTG TTAGACCGTC AAGGTGTCTC CCGTGCCAAG GTTTTGTCGA ATACGATTAA GCAAAAGCGG AAAGAAAAGG CCGGAAAATG GGAAGTGCCC ATTCCCAAGG TCAAGCCGGT AGCCGATGAC GAAATGTTCA AAGTCATGCG GACCGGTAAG AAACAGAACA AGGCGTGGAA GCGTGTGGTT ACCAAATGCA CCTTTGTAGG AGACTCTTTT ACCCGGAAAG CTCCCAAATA CGAACGCTTT ATTCGACCCA GCGGGTTGCG AATGCGCAAA GCCAACGTCA CACATCCCGA ACTCAAAACA ACGTTTCAAC TGGACATTCT CGGAGTCAAG AAAAATCCCA GCAGTCAAAT ATATACAAAT TTGGGAGTAC TTACGAAAGG AACAATCTTG GAAGTCAACG TTAGTGAATT GGGTTTGGTC ACCACTACGG GTAAAGTGGC TTGGGGAAAG ATGGCACAGG TTACCAACAA CCCCGAACTA GACGGTTGCG TCAATGCCGT TTTGTTAGTG TAA
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Protein sequence | MPQHEHMERH AKLHGRRFDA EERERKKEAR MVHKRSEFAQ KVHGIRAKLY QKKRFKEKAT MRKTIAMHNE RNNKHADDDA VADGAVPAYL LDRQGVSRAK VLSNTIKQKR KEKAGKWEVP IPKVKPVADD EMFKVMRTGK KQNKAWKRVV TKCTFVGDSF TRKAPKYERF IRPSGLRMRK ANVTHPELKT TFQLDILGVK KNPSSQIYTN LGVLTKGTIL EVNVSELGLV TTTGKVAWGK MAQVTNNPEL DGCVNAVLLV
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