Gene PHATRDRAFT_12331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12331 
Symbol 
ID7200846 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp822311 
End bp823351 
Gene Length1041 bp 
Protein Length314 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180324 
Protein GI219119115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGAGAGACCC CACCGTACGT CTTTTGGACT CCTCCGCTAC CAAACACGCC GACGTCCTTG 
GCTTTGGTCG GCGATTTGGG CCAAACCGAA AATAGTACCC GAACCATGGG ACATATTTGG
CGTTCGACGC ATCAGAACTC TAGATACTTG AGTGGAAAAC TCCCACCCGT ATCACAGCTT
TTGATCGCCG GGGATATGTC GTATGCCGAC TCGGATCCGT ACCGATGGAC GTCTTGGATG
GAACTGATGG AACCCTTGAC ACGTAGTCTT CCCTTACACG TCGCGGCTGG CAACCACGAA
ATCGAATGTA ACACGGACTC AAACGATATC TTTGTTCCCT ACGAGCATTA TTTTCGAAAC
CCGAATCGAG TACGCGACGC CGAGATGCAA CCAATTTCCG AGCAGTATCG AAAATCTCTT
TGGCGCGAGA GCTGCTCAAC TCCCAGTGCT TTCCAAGGCC AATACAACTA CGGGAACTCT
TTCTATTCGT ACGATCACGG GTCGGCCAAG ATTGTTGTCC TGAATTCATA TACCAATGCA
ACCGAAGGTT CAGCGCAGTA CGAATGGACG CAAGCGGAGC TGAGGAGCAC AAATCGTACA
CGTACACCCT GGCTGATTGT ATCGTTTCAC TCTCCTCTGT ACACGACTTT TTTGGGCCAT
GTGAACGAAA TAGAAGCAGT CAACATGAAA CAGGCTATGG AGCCCTTATT CTGTCTTTAC
GGCGTCAATC TAGTCATTTC TGGTCATGAC CATGCCTACA TGCGAACGCA CTCGCTGTAC
GAAGACTCCG TCGACACCGA AGGCCGGTCT CCAATATATC TTACCTTAGG AGCTGGCGGA
AACCGGGAGC AGCATTCCGC TGGCTATCGA CAAGATGAGC CCGAAACTTG GGTGGCTCAT
CGGACGTTGG AAGATTTCGG GTATGGGCAT CTGTTCCTAG CCAACGCGAC TCACGCCCAA
TTTCGTTGGA TTCGGGACGG CACGTCCTCT TTCGGTGTGA ACGACCAGGT TTGGATTAAG
AATGCCCACG TCCTTTCTTA G
 
Protein sequence
GETPPYVFWT PPLPNTPTSL ALVGDLGQTE NSTRTMGHIW RSTHQNSRYL SGKLPPVSQL 
LIAGDMSYAD SDPYRWTSWM ELMEPLTRSL PLHVAAGNHE IECNTDSNDI FSCSTPSAFQ
GQYNYGNSFY SYDHGSAKIV VLNSYTNATE GSAQYEWTQA ELRSTNRTRT PWLIVSFHSP
LYTTFLGHVN EIEAVNMKQA MEPLFCLYGV NLVISGHDHA YMRTHSLYED SVDTEGRSPI
YLTLGAGGNR EQHSAGYRQD EPETWVAHRT LEDFGYGHLF LANATHAQFR WIRDGTSSFG
VNDQVWIKNA HVLS