Gene PHATRDRAFT_6554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_6554 
Symbol 
ID7200621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp523518 
End bp524096 
Gene Length579 bp 
Protein Length193 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179861 
Protein GI219118161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCTTATACG GATCTCTCCG CGATTCTTCC TTTTCTCGCA AACTCGCGTA CGAGCTCGCG 
CGACTCCTTG AAGCCCTTGG TTGTGACGTT CGTGTGTACA ATCCTCGCGG GTTACCCGTT
CGCGACCCCA CACTGGAAGA TCATGTCAAA GTCCAGGAGC TCCGTGCGCT CACGCAATGG
AGCGATGGCC ACGTCTGGGT TTCTCCCGAA ATGCATGGCA CCGTAACGGG CGTCTTTAAA
AACCAGATCG ATTGGATACC TCTCAACACC GGTTCGCTCC GACCAACCCA AGGAAAAACC
TGCTTAGTGG CCCAAGTGAA TGGAGGGTCG CAGTCATTCA ATGCGGTCAA CGCCCTGCGG
TTGTTGGCTC GGTGGATGCG CATGCCGTGT TGTACCAACC AATCCAGTGT CGCCAAGGCA
TGGCAAGAGT TTGACGAAGC CGGGCGTATG AAAGCGAGCG GCTTCAGGGA ACGGGTCGTT
GATTGCGCGG AAGAATTTGC TAAATTTACT GCCGTCATGG TGCCGGTAGC CGAGCAGTTG
ACCGATCGAT TCAGCGAGCG ACAAGAAAAA GCTCGCGAA
 
Protein sequence
VLYGSLRDSS FSRKLAYELA RLLEALGCDV RVYNPRGLPV RDPTLEDHVK VQELRALTQW 
SDGHVWVSPE MHGTVTGVFK NQIDWIPLNT GSLRPTQGKT CLVAQVNGGS QSFNAVNALR
LLARWMRMPC CTNQSSVAKA WQEFDEAGRM KASGFRERVV DCAEEFAKFT AVMVPVAEQL
TDRFSERQEK ARE