Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_6554 |
Symbol | |
ID | 7200621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 523518 |
End bp | 524096 |
Gene Length | 579 bp |
Protein Length | 193 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179861 |
Protein GI | 219118161 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTCTTATACG GATCTCTCCG CGATTCTTCC TTTTCTCGCA AACTCGCGTA CGAGCTCGCG CGACTCCTTG AAGCCCTTGG TTGTGACGTT CGTGTGTACA ATCCTCGCGG GTTACCCGTT CGCGACCCCA CACTGGAAGA TCATGTCAAA GTCCAGGAGC TCCGTGCGCT CACGCAATGG AGCGATGGCC ACGTCTGGGT TTCTCCCGAA ATGCATGGCA CCGTAACGGG CGTCTTTAAA AACCAGATCG ATTGGATACC TCTCAACACC GGTTCGCTCC GACCAACCCA AGGAAAAACC TGCTTAGTGG CCCAAGTGAA TGGAGGGTCG CAGTCATTCA ATGCGGTCAA CGCCCTGCGG TTGTTGGCTC GGTGGATGCG CATGCCGTGT TGTACCAACC AATCCAGTGT CGCCAAGGCA TGGCAAGAGT TTGACGAAGC CGGGCGTATG AAAGCGAGCG GCTTCAGGGA ACGGGTCGTT GATTGCGCGG AAGAATTTGC TAAATTTACT GCCGTCATGG TGCCGGTAGC CGAGCAGTTG ACCGATCGAT TCAGCGAGCG ACAAGAAAAA GCTCGCGAA
|
Protein sequence | VLYGSLRDSS FSRKLAYELA RLLEALGCDV RVYNPRGLPV RDPTLEDHVK VQELRALTQW SDGHVWVSPE MHGTVTGVFK NQIDWIPLNT GSLRPTQGKT CLVAQVNGGS QSFNAVNALR LLARWMRMPC CTNQSSVAKA WQEFDEAGRM KASGFRERVV DCAEEFAKFT AVMVPVAEQL TDRFSERQEK ARE
|
| |