| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_56608 |
|---|
| Symbol | |
|---|
| ID | 7200644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011675 |
|---|
| Strand | + |
|---|
| Start bp | 658813 |
|---|
| End bp | 660627 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179689 |
|---|
| Protein GI | 219117802 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGACGTGAAA CAAATCTCGT AAACAGCTCA TTCACAGTTA CTGTTGATTT GCATCCAGTT
CTATCCATAT CATTCGTTGC TCCTTTGAAA ACAAGAAAGA TTCGGATTTA GTCATGATGC
GTTTCCTAGT GATTTTGCTG ACTGCTTCCG CGGTTTCGGC CTTTTCGCCT TCTTTGAATA
CCAACAAGGT CCATGTTCCG GTTCCATCCG TGTTAACGAC CTCCTTGTCG TCCCCCTTAT
TTCGTAGTCA AGCCTCGAGC TCTTCCTTAA CTCAATGCGA AGCTATGCTT CAAGAAACAG
AGCTGCCTGA TAAACTGTAT TTTGAAAAAG AAAAGGAAAT GCCCAAGGTA TTGGGAGGTC
TCAAGATTGG CCTCCGAAAA CTGGTAGTCA TTACCGGCGC GTCGTCGGGG TTGGGTTTGA
ACTGCGCCAC CACCCTCGCC AAGACGGGGC GATATTTTGT CGTCATGGCG TGTCGCGATG
TCGAAAAGGG CAAGCAAGGT ACGCACTCGA TGCTTTAAAC GCAGCTTACT TCCTTTGGTC
GTTGGTGCGT GTGAAGAATT CTAACGAAAT GTGTGCTGCT TGGCGATTTC TTTCTTCCCT
ACAGTCGCCA AAGAAAAGGG ACTCCCAGAC AACTCGTACG TTGTTATGAA GCTTGAACTT
GGTAATCTGC AATCGGTCCG CGATTTTGTG AGCAACCTCA AAGCGTTCAA AGCTGCCCGT
CCTTTGACAC ACTTGATCTG CAATGCTGCC GTGTACAAGC CCAAAGATCC TGAACCGGCC
TGGACCGACG ATGGGTTTGA AATGTCCATG GGTGTCAATC ACCTCGGCCA TTTTTTGTTG
GTTCATCTCT TGATGGATGA CATGTCTCGT GCCAAGGGTG CTCGTGTCTG CATCGTGGGG
TCCATCACTG GAAATACCAA TACCGTCGGT GGAGGTCTCG TCTACCCACA GGCTGATTTG
GGTAAACTCC AAGGATTTGA GAAAGGCGCC AAGAAGCCGG TTGCCATGGC GGATGGCAAG
CCATTCTTTG GTGCCAAGGC TTACAAAGAT TCCAAAGTAC GTTTCAATCT GTTTCACAGA
TAAGACGATC ATGGATGGTA AGAATTTCAT CCCTGACATT ATTCCTTTCT TTCACTCTGC
AAACCAGGTA TGCAATATGA TGACCGTGTC CGAGCTTAAC CGTCTTTACC ACAAAGATAC
CGGTATCGTG TTTTCCTCCA TGTACCCGGG CTGTATCGCT GAGACCGCTC TCTTCCGCGA
AAAACGTCCC TGGTTTCGCA AGGCGTTCCC TTGGTTCATG AAGTACGTCA CGGGTGGCTA
CGTTGGTATG GAGGAAGCTG GGGAACGTCT TGCTCAGGTT ATAGACGACC CACAATGCAC
TAAGTCGGGT GTTTATTGGA GCTGGAATGG CGGTGCTCAG ACAGTGGGAC GTTGGAGCCC
CGACGGAAAG CCTCGAGGTG CCGGCGGATC GGGTGGTGAG ATTTTTGAGA ATCAGCAGTC
CGACGCAGTA CGGGATCTTC CTACCGCCAA GAAAATGTGG AAACTGAGTA GGGAAGCAGT
TGGTCTTTCC AAGAAGGAAA TGTTTAAGGG TGGAAAGCTT GAAGAGGAAT AATAAGCAAA
GAAGATTGCT TCTACGGAAA AGAGGGCCCA TTGTCGATTC GCTTGGTGCT AGTCACATGC
ACTCATGTTG CTTTCACATT TGATCATCTG CACAATTCAA TATATCGATA TGTGGCTACA
TCACCGAAAA AATTCATTGC TGATTTGACA AGCTCGAGCA TAGTTCAACG AAACAATACT
AGAAACACTG GAAGC
|
|---|
| Protein sequence | MMRFLVILLT ASAVSAFSPS LNTNKVHVPV PSVLTTSLSS PLFRSQASSS SLTQCEAMLQ
ETELPDKLYF EKEKEMPKVL GGLKIGLRKL VVITGASSGL GLNCATTLAK TGRYFVVMAC
RDVEKGKQVA KEKGLPDNSY VVMKLELGNL QSVRDFVSNL KAFKAARPLT HLICNAAVYK
PKDPEPAWTD DGFEMSMGVN HLGHFLLVHL LMDDMSRAKG ARVCIVGSIT GNTNTVGGGL
VYPQADLGKL QGFEKGAKKP VAMADGKPFF GAKAYKDSKV CNMMTVSELN RLYHKDTGIV
FSSMYPGCIA ETALFREKRP WFRKAFPWFM KYVTGGYVGM EEAGERLAQV IDDPQCTKSG
VYWSWNGGAQ TVGRWSPDGK PRGAGGSGGE IFENQQSDAV RDLPTAKKMW KLSREAVGLS
KKEMFKGGKL EEE
|
|---|
| |