Gene PHATRDRAFT_54411 details

Gene Information

• Locus tag: PHATRDRAFT_54411
• ID: 7200560
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 208403
• End bp: 210565
• Gene Length: 2163 bp
• Protein Length: 626 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002179604
• Protein GI: 219117625

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0187117
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAAGGTCCTT CCTCCACGAA CACTACCCGT TCGTATTCCT GTACCATTAG CGTATGCTTT 
TAACCCCCCC CCCCCCCCCT CGCAACGCGA CAATATAACT TGCGACACGC TACCATGAAC 
ACTCTAGAAG CATTGGTCGT GCTTCTTTGT CTGGTCTTCT TTGCGCCTTC ACAACCATGC 
GTCAGCGCTG TTAATGAGAC TTTTCGATTC GGCATTCTGC CGAAGAGCCT AGATAATCCT 
TTCTTCGACC CCGTCCGGAC AGGTTGTGAA GCTCGAGCGG ATGTTTACGG AAACGTAGTA 
TGCGTATGGA TTGGGCCAGA GCAGGAAGAG CCGACGGGTG CCGCCCAAGT AGAATGGATT 
GACCGAATGA TAGATCAAAG GCTCGCCGGC GACCCTGAGG CGCTCGACGG ACTTGCCATT 
TCGGTTGTAA ACGAGGAGTC CGTGAAGGAG CCAATTCGAA GAGCGCTTGA CTCGGGAATG 
TCGGTTATTT GTTTTGACAG CGATGCGGCT AACTCGGATC GTCAAGCATA CGTTGGAACC 
GATAACGTCG CGTTTGGTGA GCAGCTCGGA AAGGTTTTGT TGCAACTCCA ACCCACCGGT 
GGGATGTTCG CACTGGTTTC CATCCAAACG CCAAATTTGG AGCTGCGAGT TCGCGGTATA 
CGATCCGCAC TATTAGGCTC TACCTGGACA GAACCTCCCG ACTCCATTTT GTACGAAGAA 
GCGGGCAACA TAACGCTAAC ACTTCAGAAT ATGAGGGATT TGAAGGTGGC AAATCCGGAC 
CTTGGAGCAA TCATTCCGCT CTACGGAACT GTTATGCAGT ACGAAGACCT TTGGATAAAA 
TACGTTGATA GTCACCGAGA CCTCACGCAC GTTATAGCCG ACGCTGGATC GAACCAAATA 
TCCCTATTGG AACGCGGCTT CGCTGATGGT TTAGTAGGAC AACTACCGTA CCAATCTGGG 
GAGGTGTGCA TCGACACCCT CTTAAATCTA CGTCGGGAAT CGGGTGGAAA ACCTTCTGCG 
CACAGAAATA GCTCAGACCT GGTTTTCGGG ACCAATTTGT CTTTGCTGCT GCGAATACCA 
TTGATTCTAC CCACACTGAC TGTCGACCAG AACTTTGTTG GAAATTATCG CATCCTCGGC 
TACGTCTTAT TCTGCATCCT TGCTTCGCTT TCGATTGTCG TCATGGCATG GGTGTTGATG 
AAACGGAAGA CATACATAGT TCGGGCTTCT CAGCCCATTT TTCTCATTGT GGTTGCTGTT 
GGTGCACTAA TTATGAGTTC CTCGATAATT CCAATTGGCT TCGACAACGA GAATTACAGT 
GTTGGTGCCT GTTCGGCAGC TTGTATCGCC ACCCCTTGGT TGCTCTCTAT AGGCTTTTCC 
ACCGTTTTCT CGGCGCTCTT TAGCAAGCTG TGGCGAATCA ATCGGGTGGT GGAGTCAGCT 
CAGAGGTTCA ACAAGCAAGT TGTGACGGTG CGGGACGTCA TTTTACCGTT CTGTCTTCTG 
ATGGTAGCCA ATTTGATCAT ACTGATTTGC TGGACGGTTG TTGCGCCGTT GGAATACGTA 
CGACGAGACG ATCTCGGAAC TGATCCTTGG AACCGCGTCA TATCAAGCTA TGGGACCTGC 
ATGACTAGGG AAGGCCAGCG CTCTGTACCG TTTGTGTCAG CGCTGGTTGC TGTCAACCTG 
GGAGCTCTCT TGTTTGCGAA CATTCAAGCT TACAAGGCCC GGAGTATTCA GAGCGAATTT 
AGTGAGTCGA AGTACATTGC TTTAGTGGTA GCGGGAATGA TGCAAGTGAG TCTTGTTGGC 
TTGCCAGTGT TGCTTCTGAC AGTCGACAAT CCTCCCGTGT ACTACCTACT TCGAATTCTG 
TTGGTCTTTG TGATTACTCT GGCGATAATC GGACTTATCT TTGTTCCAAA AATGCTTCAT 
AAACCGAAAG AGAACGGACG GCAGGTCGTT GTCTCGCATG GTACACCTTC GACTGAAGAG 
ATTGCTATGA GCTCAATGTC AATGGTATCA AACCGTGGCG ACGATGGTAT AATGGACTCT 
CATTATTCAC AGTCAGATTG GAAAGCATTG CCTAAAGGCA GTGTAGAGGA ATCTTCCGGG 
GTGACCAGTA TTGCGTCAAT AAGGGCAGCG GCTGCCCAAG CTCAGGAGCA GCCCTCCTAG 
AAT 

 

Protein sequence

MNTLEALVVL LCLVFFAPSQ PCVSAVNETF RFGILPKSLD NPFFDPVRTG CEARADVYGN 
VVCVWIGPEQ EEPTGAAQVE WIDRMIDQRL AGDPEALDGL AISVVNEESV KEPIRRALDS 
GMSVICFDSD AANSDRQAYV GTDNVAFGEQ LGKVLLQLQP TGGMFALVSI QTPNLELRVR 
GIRSALLGST WTEPPDSILY EEAGNITLTL QNMRDLKVAN PDLGAIIPLY GTVMQYEDLW 
IKYVDSHRDL THVIADAGSN QISLLERGFA DGLVGQLPYQ SGEVCIDTLL NLRRESGGKP 
SAHRNSSDLV FGTNLSLLLR IPLILPTLTV DQNFVGNYRI LGYVLFCILA SLSIVVMAWV 
LMKRKTYIVR ASQPIFLIVV AVGALIMSSS IIPIGFDNEN YSVGACSAAC IATPWLLSIG 
FSTVFSALFS KLWRINRVVE SAQRFNKQVV TVRDVILPFC LLMVANLIIL ICWTVVAPLE 
YVRRDDLGTD PWNRVISSYG TCMTREGQRS VPFVSALVAV NLGALLFANI QAYKARSIQS 
EFSESKYIAL VVAGMMQVSL VGLPVLLLTV DNPPVYYLLR ILLVFVITLA IIGLIFVPKM 
LHKPKENGRQ VVVSHGTPSQ TVATMV