Gene PHATRDRAFT_54405 details

Gene Information

• Locus tag: PHATRDRAFT_54405
• ID: 7200682
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 167932
• End bp: 170838
• Gene Length: 2907 bp
• Protein Length: 623 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002179594
• Protein GI: 219117604

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTTCCGTCC AGCAAAATGC CACCCAAGCA CGAAAGTCAA GAAGACCTCA AGATGTCAAC 
ATCTAAACAA GATGAAGACG AAGTCCGCAC CATTGACTTT CTCGACCACG ACGATGGTAA 
CCAAGGCAAC GGCTGGGGCC GTGGTATCGT GAAAGACTTC CGCAAGACTG TTGGAACGCA 
CTGGGTCAAC GAAATGACAA ACTTTAACCA GAAGTCGATT GCTGTTTCCT TTTTCATCTT 
CTTTGCGGCT GTAGCTCCCG CGATTACTTT CGGTGCCGTC TATTCCAAGG TGCGTTTTCC 
GACTTGTGTG TGTGTATGGT ATTGGTCATC GCCACGTGTT CGTCTCTCGA TAGTATCGTG 
TGTTCTTCGG GGTATCACCG AGTCACCGTC ACCTTGACGC TTCCTCACAT CCTCTTGTCT 
TATCCGCATT TCCATAGACC ACCAATGACG CGATTGGTGC CGTCGAGATG CTCATTGCGA 
CTGCTTGGTG CGGAATTGTC TACGCACTTA TTGGAGGACA GCCCATCATG ATCAACGGTG 
GAACCGGTCC CGTTCTTGCC TTTAGTGCCG TGCTTTTTGA TATTGCGGAC AACATGGACG 
TCAACTTTTT GACTTTGAAT GCCTGGACTG GACTCTGGGT TGCAGGATTC TTGATCATTG 
CGGCTTTCGT TGATTTGAAC CGTCTAATGA AGCATGCTAC GCGCTTCACC GACGAAATCT 
TTGCCCTGTT AATTGCGTCC ATCTTCGTGA TTGATGCACT TGGTAGTCCC TTTTCTGATG 
TAGGTATTTA CTGGTACTTC ACCCGCAGCC ATGATTCGCA TGACGAATTC GAAGACCAGG 
AAGACTACTC ATACATGGCC ACAGCGTTTC TCAGCGCCGT TCTCTGTCTG GGAACAACCT 
GGTTGGCCTT CTTCCTGAGG GATATTAAGT TTTCGCCCTA CTTTCCCAAC GATTCTTGGC 
GCACTCTCAT CTCCGATTTT GCCGTGGTTG CCTCCATTCT GATCTGGACT TTGATCGCCA 
ACGGACTCTT CGACAATGTT GAAGTGGAGC GCCTCAATGT CCCGGATAGC ATCACGCCGA 
CTCAAATCTG CTGCACCGCC GATTGCATGA CGTCGTTCCC CGATGACTGT CCCGACATTA 
CACCGTACGG ACGCCGTTCC TGGATTGTGG ACCTTGGTGC CGTCAACGGA AAGTCCTGGA 
TCCCTTTTTT TGCCGCCATT CCGGCTCTTT TGGCATTTAT CCTTGTTTTC TTGGATGATG 
GTATCACCTG GCATTTGATC AATCACCCGA GCAATAAGCT TACTCACGGA GACGCTTACA 
ATTGGGACAC GGTTGTTATT GCTGCTATGA TCGCCGTCAA CTCTATGCTT GGTCTTCCCT 
GGTTGGTCGC CGCCACTGTC CGATCCCTCA CCCACGTCAA TGCTCTCGCC GAACGTAGTG 
AGAACGGCAA AATTATCAGT GTGCAAGAAA CACGCTTGAC GCATTTGGGA ATTCACTTGC 
TTGTGCTTGC TGCTCTCTTT GCACTGGATG TGCTCAAGCT CATCCCTGTG CCAGTCTTGT 
ACGGAGTCTT CTTATATATG GGAGTGGCCA GTTTGGCATC CAATCAATTC TTCCAGCGCT 
TCCTCATGTT TTTTATGCAG CCCTCCAAGT ACCCCCACGA GCCACACACT AAGTACATGG 
CTCCTAAGCG CATGCACTTG TTCACAGGGA TCCAGCTTGG ACTTTTCGTA ATTTTGACAG 
TATTTCGATC TATTTCTGTC ATTGCCATTG CTTTTCCGAT TGTCATTAAG GCTTGTATTC 
CAGTCCGGAT GTACATCTTG CCTCGCTACT TCACCTCCGA AGAACTTCTC ATGATCGATA 
CCGATGACAG CATCGTCAAC GAATATCTCG AGTACAAGGA GTCCAAAGGC GAGAAAGTAC 
CCGTCCGTCA TTGTGGCGAA CAAGAGCCCG AGGAAGTTCC GATGCTTCAA GTGACTCAGC 
ATCCTATCCG AATCGACGAT GGCAGCGATG AAGAAGGGTC CGTCGAACAG GTTTAATGTT 
TTTCTGTTAT GTAACGGAAT GGAATTTCTA CTAGCTTTCA AAAGAGAAGG CTTAAAGTTT 
CAGACCGTAG TATTGATTGC CACGTGTCCA CTAGAGCCAT CTAAACGCCT TCCTTCGCTG 
CGAAAAAATG AATTTGAGCA TCCTTGTAGC CAGTAACCAT TAAAGGCGCT TGACCACCAG 
TTGGGACATC TCAACATGAC AGTGGTAGTC TCGGTTTGTT GAAGCCGATG CTTACTAGCT 
GTAAAGAGAC CCTCAATGCT CAAAAGGGAT GCTCTTTGGT ATCAACAGAT ATGTTTTCGA 
ATGTGCTTAT TAATAGACAA CATAAACGAA AGTACTTTCA AGATACAATT TGTATACAAT 
GTCTGCAGTT GAAAAAGGTG GACTCACGTC CCATCGTGGC CCAAATCGAT CTACACTGCA 
ACTCCAGATA GGAAACCGTT TTTCTGAGAG TAGTATGCGG TGGAGAGCTT TGCTTCTCGC 
CAATACGATT CTCCAACAAC TCTACGCAGA CGAGGTACTA CCGCTTTATG GAGTGGCGTA 
CATAGAGGAT CACCTTCTCT GTTAAGTTGG ATGCAATCAG AGATAACTGC CTTGGCTCGA 
TTCCGAAGAG CCGCGTCGCA CGGATCCCTA TCAAGAGCAG CGAAGAGTTT TCTTACGAAA 
ATTAGAAATC GCTGTCGTTC AGACAAGACT CGTCGGATTG GCATAGGAGA TCTACCCGGA 
AGGTGGGAGG TACGCTCGGA AATATCGTTT GGCAACATGT TTTACCGGAC TTAAAGAAAA 
ACCTTCGCTT ACGCAGTCTT TGGTTGGGGC GAGCTACGTA GAGAATTCTA ATGGAGCGTT 
TGTTGATTAT TGAACTCGGT CTGCTTT 

 

Protein sequence

MPPKHESQED LKMSTSKQDE DEVRTIDFLD HDDGNQGNGW GRGIVKDFRK TVGTHWVNEM 
TNFNQKSIAV SFFIFFAAVA PAITFGAVYS KTTNDAIGAV EMLIATAWCG IVYALIGGQP 
IMINGGTGPV LAFSAVLFDI ADNMDVNFLT LNAWTGLWVA GFLIIAAFVD LNRLMKHATR 
FTDEIFALLI ASIFVIDALG SPFSDVGIYW YFTRSHDSHD EFEDQEDYSY MATAFLSAVL 
CLGTTWLAFF LRDIKFSPYF PNDSWRTLIS DFAVVASILI WTLIANGLFD NVEVERLNVP 
DSITPTQICC TADCMTSFPD DCPDITPYGR RSWIVDLGAV NGKSWIPFFA AIPALLAFIL 
VFLDDGITWH LINHPSNKLT HGDAYNWDTV VIAAMIAVNS MLGLPWLVAA TVRSLTHVNA 
LAERSENGKI ISVQETRLTH LGIHLLVLAA LFALDVLKLI PVPVLYGVFL YMGVASLASN 
QFFQRFLMFF MQPSKYPHEP HTKYMAPKRM HLFTGIQLGL FVILTVFRSI SVIAIAFPIV 
IKACIPVRMY ILPRYFTSEE LLMIDTDDSI VNEYLEYKES KGEKVPVRHC GEQEPEEVPM 
LQVTQHPIRI DDGSDEEGSV EQV