Gene PHATRDRAFT_4918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_4918 
Symbol 
ID7200697 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp272027 
End bp272882 
Gene Length856 bp 
Protein Length238 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179612 
Protein GI219117641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.226314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AACCATGTAG CAGTCTTCAA ACCAGGCGAC GAAGAGCCTT ACGCTGAAAA CAATCCCCGA 
GGCTACCTCC AACAACCCGG GCAACACTTA TCTTTGCGAG AAGGTATTGC TCCTGGGGAA
GCCTGCATTC GAGAAGTGGC AGCGTATCTC TTAGATCACG ATGGCTTTAG TGGAGTTCCC
ATGACGACCC TCGCAGAAGC CCGCCACCCA GCCTTCAACA TAAATGGCGC TCGTTTAAAG
GTCTCCGAAG GCGGGGCGTC TGTCGGATGG CACTCGACTA CACCAAACTC GCCAGTGAAA
CCAGCGTCGA TGCGCAAGGC TGGCTCCTTT CAAGAGTTTA TTCGTTGCGA ATGTACGATG
GATGATCTAA GCCCCAGTAA AATTACAGCA GAAGAGATTC ATAAGATTGC GATTTTGGAT
ATTCGGGTAA TGAACGCCGA CCGTAATTCC GCCAACCTCT TGTGTCGACG ACTTCCGGAC
AACACCCTTG TGCTCGTTCC CATTGACCAC GGGTACTGTC TGCGATCCGT TTGTGATGTT
TCATGGATGG ATTGGTGCTG GTTGGATTGG CCACAGATGA AAGAGGTATG TAGCTTAGCG
GCTGTGCTGA GATTTCGTGA TAGCCGGTGG ACGAATTTCT TACCATATAA TATCTACTCT
TTGCATCTAG CCGTTGAGTG ACAAATCCAA AATGTACATT CTCAATCTTG ATATTGAAGC
GGATGCTCGA CTTTTGCGTG AGCGCCTCAG CATTTGTGAA GACGCAATTG ACAATTTTCG
TGCATCTTCC CTATTGCTGA AGGCCGGCGT CAAAGCAGGT CTTACGTTGT ACGATATTGC
TATCATGTGT TGTCGT
 
Protein sequence
NHVAVFKPGD EEPYAENNPR GYLQQPGQHL SLREGIAPGE ACIREVAAYL LDHDGFSGVP 
MTTLAEARHP AFNINGARLK VSEGGASAGS FQEFIRCECT MDDLSPSKIT AEEIHKIAIL
DIRVMNADRN SANLLCRRLP DNTLVLVPID HGYCLRSVCD VSWMDWCWLD WPQMKEPLSD
KSKMYILNLD IEADARLLRE RLSICEDAID NFRASSLLLK AGVKAGLTLY DIAIMCCR