| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45712 |
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| Symbol | |
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| ID | 7200517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | + |
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| Start bp | 1018404 |
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| End bp | 1020101 |
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| Gene Length | 1698 bp |
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| Protein Length | 480 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179767 |
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| Protein GI | 219117965 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00011488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TGGGATTTGA AGCCTTCTTA TAAACTTGAA GCGGATTTCT GAGCCGCAAA GGTAGAGCAA
GTAAATAAGC ACCTCCACCC GACCTTGCTT TAAGTGCACC GCTATTTCCA AGCCTTAAGC
TTTACTTCAC ACCTCGATCG AGCTTGCGGT GGGATGCCGT CACGAAGTGT TATTGAAGTC
GATGTTTTAA TTCCGGTTCA CAACGCGACG GATACACTGC GGGCTACGAT CGAGTCCGCC
ATGAATCAAG AACCATCACA CGATGACGAC AACGTTGAAA TCCAAATCGA CCTCGATGTT
CACATTTGCT GCTATGATGA CGGTTCTACA GATACGAGCT GGTCCATACT CAAAGATCTG
GAAGATCAGC ACATGAAAAA TTCTCGGCAA TGCTCCTCCA TATGTTGCGA CGGCAGCAAG
CGCTCGCGAG TGCTGACGAA ACTGTGGTTA GGTAAGGAAG CAACATCTCG AGGAGCAGGT
TACGCGAGAA ACCGGGCGGC TCAACTTCGA CCAAATCCAA ATCCCGATGG TTTTCTTTGC
TGGTTGGATT CAGACGACTT GATGGCACCG ACACGGATAT ATCGCCAAGT GCAGTATTTA
CTCTCTCTAG AGGAGGAAGC TCGCAAACGA GCACTCTTGG GATGCACATT TGAACGCGAC
CCACCCGATT CAACATGGCA CTATTCTGCT TGGGCCAACG GTTTGACCGA TGATCGGCTA
AGTCTGGAGC GGTTCCGAGA ATTGACCATA ATTCAGCCTT CATGGATGAT GCAGCGATCC
CGATTTGCGG AAGTGGGCGG CTATGTTGAA GCCCCTCCCC TAAACGACAG TGATGATTCC
GTTGAATGTT CCGTTTCTAT CCAGAAATTC GAACTAATAC ATCCAGTATT TGACACCCCC
ACGACGCTGC GATTAGCGGA AGATTTGCGG TTTTTTCATG CTCATCTACA CTCGAATGGA
ACCCTCAATC TATTGCGTCA TGATCCTCCC CTGGTGATAT ACAGGCATCG TGCCGGTCTT
TCTCAAAGCA CGACAACACC ACGGAAACTA TTGCTTCAGT TACGAACGCT AGCGTTTGAA
CGAATGGTTC TTGAATCGGG GGAAATATGG AAAGAGAACG GTTTCTGTAT CTGGGGTGCG
GGCCGAGATG GAAAGGATTT TGTTAAGGCT CTGTCGGATA CGAACCGTAA AAGAATTCGT
TGCATGGTCG ACGTAGATGA CAGGAAGATT GCTATTGGCT CTTACGTTAA TCGAGATATC
AGAGTCAACA TTCCTATTAT GCACTTTTCT CTTTTGGCAA AGGACGAAAG CTTGCGTAGC
AGCCTCTATG AGCAATGGAC AACGGGACAG AACCATAACC TTCCCGGATT TGGTAAAATT
CGGAAGGGAA GAAATTTGAC AGGCCCGCAA GGGCTCCCTT CAGCAAAGAA ACCCAAGTTG
TCGAACAAGG GTAGCGTTGA CCCGCAATTC AAATCCCTCC TACGCGAGCT GCCCGTTGTA
GTTTGTGTCT CCATGTATCG GACAAATGGT GCATTGGAGC ACAACGTGAA GCAAATTGGA
CGCATCGAGG GTGAAGATCT ATGGCATTTT ATCTAATTGG AAGACGGCTG GCTACTTTCG
AGGAAATAGT AAACAGGCCT CAGAGGTTTC TGTTGGTAAA GACTAATGTG TATCGTTTAG
AAGACATGGC AGGCATGC
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| Protein sequence | MPSRSVIEVD VLIPVHNATD TLRATIESAM NQEPSHDDDN VEIQIDLDVH ICCYDDGSTD
TSWSILKDLE DQHMKNSRQC SSICCDGSKR SRVLTKLWLG KEATSRGAGY ARNRAAQLRP
NPNPDGFLCW LDSDDLMAPT RIYRQVQYLL SLEEEARKRA LLGCTFERDP PDSTWHYSAW
ANGLTDDRLS LERFRELTII QPSWMMQRSR FAEVGGYVEA PPLNDSDDSV ECSVSIQKFE
LIHPVFDTPT TLRLAEDLRF FHAHLHSNGT LNLLRHDPPL VIYRHRAGLS QSTTTPRKLL
LQLRTLAFER MVLESGEIWK ENGFCIWGAG RDGKDFVKAL SDTNRKRIRC MVDVDDRKIA
IGSYVNRDIR VNIPIMHFSL LAKDESLRSS LYEQWTTGQN HNLPGFGKIR KGRNLTGPQG
LPSAKKPKLS NKGSVDPQFK SLLRELPVVV CVSMYRTNGA LEHNVKQIGR IEGEDLWHFI
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