Gene PHATRDRAFT_45703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45703 
Symbol 
ID7200474 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp982735 
End bp990451 
Gene Length7717 bp 
Protein Length2426 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179758 
Protein GI219117946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.235875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCCA ATAGTGGTGG GATGCCTGGA GGTAGTATGA ACGCAACGTC GATGCAAGAC 
ATGCAACGTT TGCAGCTCCA AATGGCGCAG TATCAACAGC AGCAGCAACA ACAACAACGA
CAGGCGCCCG TCGGAAACCA GCTACTCCTT AACAATCACA ACAGTGTGTC AAACCTAAAT
ATGCAGCAGC AGTTTCCCAG CAACACAAAC AACGCGCCTA CCGCATCATT TGTGAACCTG
TCGACACAAT CTGGCGCCGC AGGTCGTATG AGTAATCCGG CGCTTGCCAT GATGCAACAA
CAGCAGCAGG GAGTTGTGAC AGGTAGCAAT GGCGCTTCAT TGATGAATTC CGGGGGTCCC
AACGCGGCTT CCATGTTTAG TTGGAATGGA ATGCAGCAGC CACAGCAGGG TCAGAACGCG
TCGTCGATGG ACGCCAGCAC CGGAAGTAGT GCTCGTCTCA TGGCTATGGC TAACATGAAT
CGTATGAGTA TAGGGGGAGG GGCCGGTACT ATTTCAGGGC AGGGGAATAG TATGAATCCG
TCTACGAGCA CAATGCCGAA TATGCAGACT TTACTTCAGC AGCAGCAGGT GAACGCCTCT
CATACACCAA ATCAGATGGG CTTTCAGCAG CAGCATCACT TGTCGGGGTC TCAGATGGGA
TCGTCCACAA ATACGAATCA CACCAACGGT GGAGGAGCAC AGCAGCTTAT GCTACAGCAG
CAGATCGCGA GTTTACAGAA GCAGATGCAA TTTCAACATC AAGGTGGCAT TGGAACCGTA
TCAGCTATGC AGAATCCTTC TATATCCAAT GCAACTGTTG GCAGTGCGGG TCCACGGGCG
GCAAACTCGC TGCAATCTCA CCAGCAGCAA CTTCTGCAGC AAATACAGCA ACAACAGCAT
GTTGGGCCCG GGCCTCCTTC TATGCCTGCG CAACACCAGC AACCCTATCA ACAACACCAA
ATGTCTGCCG GAATGCAGTC TCTGCATCAG CAAGACTCGA CTCCACAAAA TATGATGAAT
ATGCTTCAAC AGCAACCTCA ATCTCACGCC AGAAATAATG CCATGGCTAA CGTGATGAGT
GATCAATCAA GTCAGACTCT TAGTCGAAGT GGGTCCTTAA ATGAGCAACA GTTGCGAATT
CATCAGCAGA ATCTGCTGCG TGCTTCATCC GGGCAGCAAA CCACGGTGTC GGATACGCAA
GAAGCGGCGA AGTCCGTAAG ATCGCAGCAG CAGTCACCAA GTCAACCGTC CAAACAACAT
GGAATGCATC CACAAAATGC AACGTCGTAT CAACCATCCA ACAATATTGT ACAGGGTCCA
TTTGGCGGAA TGCATGGCTT GCCCAATCAG CATAGCATGC AAAGTGTGTC CAACCAACAG
CTAAACAATC ATGGGAAAGC AATGCCGATG CATTCCGATG GTAGCACTAC TTTAGGCATG
TCCTCACATG GGAACAATAG CATGTACAGT GGGCAAATGA GTGGTAGTAA CGCTTCTCAG
CAGCAGGGTA GCGACGATCC AATTTCCATT TCACAGCACA GTAATTTAAG TGCTGGTCAG
CTGTCACGCA CTCATCAAGC GAGCAGCAAT GACTCTGGAC AAAAGACTTT TCTGGATGGT
AGCTTTGCTG GGGGCTGGCA ATCTAACGAT GATCTGCCAG ATCGACGTCG CGTTATATTT
AGCATTTTAG AGGTGATTCG GCAGATTCGG CCCGACGATA CGAGCAAAAT GTCAAACAAG
TAAGTTCTTT TCGAGGTTTA TTACGTGGTG CCGGCTTATG ACAAGTTTCT CAGCTAGCTC
TTTCTCTCTT AGACTACCTC ATATGGCAAA GAGCCTGGAA GAGCATTTGT ATCGATCGGC
ACACAGCAAA GACGAATACA TGGATTTTTC AACTCTGAAG GAGCGTTTGC AAGCAATTGC
GCATGGACTT GACCTGCACA GAGGTTCCTC TTCGCCAATG GTTTCCAAGA ATCATGATAC
GACGCACTTG CCCCAGCAAA GTAGTAATCC AAGCTATTCA AATATTGAGT CTCAGCAGAA
TTCTTTGCAA ATCGGCTTTC CGCCAAGCTT GACTGCATCT GGTCCGACAA GTCAGCAGCA
TCAAAATGCG GGTTGGACGG GTCCATATGA TGTAAGTTCC AAGGATGTGA TGAAAATTCA
AGGCCAAAAC AACGCCGACA ATTTAGTTGT GCAGAGAAAC GCAGCTAGTC AGCAGAGCTT
TGGACGTATT GCTGGTTCGA ATAGTCAACA TGGAGGCATT ATGTCGGGAT CAAATACCGC
TGGTCCAAAC CACAACAGCG GAATTTGGCC AACGAATATG GGATCGTCGG AAAGTTTGGG
TCAACCGAGC ATAGGGAATG TGGCAATGAA CGGCGGCTCG CAGCATCAAT CCTCAATGAA
TCAAGGGATG AACGATATGG CGTCGATGAG TCAGACTTCG CAACAGAACG ATTTTGCTGG
GTCTTCCCTG TTTATTGATC CTTTGCAAGG CTTCAATTGG CAGAGCGGTT TCCTTTCGGA
CTCAAATATG CCTCCCCCTG TCGGGAATGG TATAGTTAAC TCGGATTATC CAAATACACC
CAAGTACCAG GATCCGGGCG TAGCGCAGAA GCAGAAGGTC ATATTGCAGC AGCAACAGCG
ATTGCTGCTA CTTCGGCATG CCAGTAAATG CAAGGCGGGA TCAAACTGTA CGACGAAGTT
CTGTTCTCAG ATGGTGACCT TGTGGAAGCA TATGAAGACT TGCCGTGATA AGAATTGTAA
GACTTCTCAT TGCTTGAGCA GTCGTTGTGT TTTGAATCAC TACCGTATTT GCAAAAATCA
AGGCAAGACG TCGACTTGTG AAGTATGCGG TCCTGTGATG GCGAAAATCC GTCAACAGGA
GCGCGACGAT GGTACTGGTG ATCCCTTGGC CACCGATTCC TCTGCCATGA ACTATCTTCA
GCCAAGCTTG AATGCTCTTC CAAATGTGAT TCCGACAAAA CAAATCGGTG GTTTGTCACA
GGTTCGACGG AGCGATAATA TTTTGGAAAA TTCTTGTCAA AGTGAACAGG TCCAGCTGCA
GCAATTGCAG GCGCAGCAAA TGAAACTTCA AACACAGTTG GATTCATTGA AGCAGCTTCA
GAAACAGCAA GAGCAATTGC TCGAGCAGCA GTCGAGAATA CAGGAGCAGG CGCATAAGGT
CAAGGACCCA AGCTCCCAGC AAGCACAACA ATTGCAACAA CAGCAGCTTC TTCTGCATCA
GCTACAGAAA CGATGCGAAC AACAGCAGCT TCAGCTACAA CAAGAGATTC AGTCCCAATC
GAGAACAGCT GGTTTGGCCC AAGCTCAGGC TCAGCAATTC CAAGCGGCAG CACAGTTTCG
TACAAGTGTA CAAGAGGCCC AGATGTTGCA GTCTTCATCA CCAATTATTC CTGGATCCTA
CGGGGAACCA ACAGAGTCTA AGAAAAAGCG GCATACGGTA ACAAAATCCA AACGAATTTC
GTCGAAAGGG AAGCGTGGTG GGAAAGGGAA AGGACTTCGG GCTGCGGTTG AGGTTCTATC
ATCCCATGAT CCAGCCGAAG ATAACTTTGA TCCATATGCC TCGCCAAAAA AGAGGGGTCT
GTCTTCTTCT TCGAAGCCAG CGCAAAAGAA AAGGAAGGCA ACTTCCGATA AAGAGGCTGA
CCCAGGCGAA AGGGCGACAG GAACTGATAT TGTGGAAGAC TCGACGCTGG CGTATGAAGG
CAATACGTCT TTGCTTCCGT TCATGAGTCT AGTCAGCGTC AGAAAACATG TGGATTCTCT
GAATAAAAAA ACAAGTCTTT GGTCTCGCAT GGTGACTTAC AAGTGTCTTC CAGTCATTCA
AGAGCTCATT GACGACCAGT TTGGGTGGGT TTTCCACGAC GCCGTCGATC CAATTGCACT
TGGCTTGCCC GACTACTTTG ATGTTGTGAA ACATCCCATG CATCTCGAGC TTGTGAAGAA
AAAACTGGAA AATGCGATCT ACTGTGACAC AGACAGTTTT GCGCATGACG TTGAGCTAGT
TTTTGAGAAT GCTATTTTGT ACAATGGGGA AACCAGTGAA GTTGGAGAGC TAGCGAATAG
TTTCTTGGTC AAGTTTGCTC AGATATACGA GAAGCTCATT GCAGGTATGT ATTAGTTGTG
ATCGAAGTAG TCGTGTATTT CGAGGCTTTT GTTCACTTAT ATTCAATCAA TTTTTCGAAA
AGGAATCGAG TCGCCGCAGC AACTCGTGAA AAAGAATGGG GAGGCTTGTG CTCTCTGTGG
TCTCCAAAAG AGACAGCTTG AGCCATTATC GCTTTATTGT CATGGGAACT GTGGTATGCA
GCCTATCGAA AGGCATTCAT CTTACTTTAC CGATCACTCA AAATCAAATC TTTGGTGTTT
ATTGTGTTAC GATCAGTTGC ACGAAGAAAA AATCATATTG CTGGACGACG GAAGTGATAT
TAGAAAAAAG GATTTACAAG AGTTCAAGAA TGACACTTGT CCTGAGGAAG CATGGATCAC
TTGTGACGAG TGTAATTCTC AAGTTCACGA AGTTTGCGCT CTTTTCAGCA GGAGAAACGA
GGCAAAAGCT TCGTACACCT GCCCAAACTG CTATACCTCG AAATCTTTAG CGTCGCAAAG
CACGAAGTCT GTGGCCAAGT TTGTAAAGGG GGCTGATTAT TTACCACACT GTAAAATGAG
TATTGATATC GAAAAGGGAC TTCATAGAAC GCTCCAAGAT CTCTATGATG CCAAAGCGAA
AGATGAAAAA TTGGGGGCCG GCCAAACTGA GCAAGCGGAG GGTCTCACTG TTAGAGTGCT
ATCAAATGTA GAAAAGAAAC AATCTGTAGG AGCGAGGGTA AGTAAAAAGC GGAGCTTCCA
GTCAAATTTC TTGGAAGTTG TTCTCATTCT GAGGTTCCTC TTCACAGATG CAACGCTGTT
TTTCCGAAAA GGGGTACCCT TTAGAGTTTC CTGTACGCTC GAAATGCATT GCCCTCTTTC
AAAAAATCCA CGGTGTTGAC ACCCTTCTTT TTTCAGTCTA TGTGTATGAA TACGGGCAAG
AATGTCCAGC TCCGAACAAA AGAAGGGTGT ACATTTCTTG CTTAGATTCT GTTCAATATT
TTGAGCCCAG CTGCTACCGT AAAGCGGCTT ACCAGGCAAT CATTGTCGAA TATCTGCGTT
ACGTAAAGGA GCGAGGCTTC CATACGGCTC ATATATGGAG CTGTCCTCTG ACGCCCGAAG
ACGGATACAT TTTCTATTGT CACCCATCGC ACCAACTTAT ACCGCGAGAA GATATGCTTC
AGTCATGGTA TCATCAGCTA CTAGAAAAGG CGAAGTCAAG TGGTGTTGCT ATTAGCACCA
CCACGCTCTA TCACGAGTAT TTTGAAGGTG GGGCTGATTC TACGAAAATT GAGCAACAAA
GGTTGCCGAC CTGTCTCCCA TATTTTGAAG GTGACTACAT ACCTGGTGAA ATCGAGAATA
TCCTGGAAAC AATTGATGAA AAAGAAAATC AGAGTAGTGT CCAGAAACTG ATCATGTCCC
TGCTTGGGCA GAGGATCATG AAGATGAAAG ACAATTTCCT CGTTGTTCAT TTACACAATG
ATGGTGTTGC TGCGGCTAGC GAGCAAAGCG AAGACGTTTC AAAAGGGTGT GACGGCTGCG
ACGAGAAAAT AGTGCTCAGC AAGAGATCAA GTACAACTGA ACCGGGTTTG ATGCGGATCG
ATGTAAGGGA CGATGATGTA GCAATGACGG AAGCTGACGC TTTTCCTGCC CGGGAGGATC
CTACTGTATT GAAAACAGCT GCTCCACCGA AGAAGGTAAA TACTCCGGAG AAAGCTACAC
GTTCAATGGG AGAGGCAACA TCCAAATCTG AAAAAACTGA AGACAAGAGT GTTCCAACAC
CTGGTATGTT GCTATTTGAA AAGCCTGGGA GCGACACAAG TCTTGTTGAT TCAGCTAAAG
ACGCAGCAAA TGAGGGTGTG GCCCCAATAT CAGTTTCAAT GGGAGAACCA ACAGCCGAAT
CTGAAAAGAG GAAAGATAGA TATGTTTCGA CAGCTATTGT TTGTGAGAAG CCTAGGAGTA
ACTTCAGTCT GATTGAATCA ACGAAAGATA CAGCAGAAAC CGCTGCGGCC CCCGATTCAA
TTTCGATAGT AGATTCAAAA GTTGATTCCA AAGACACGGC TTATTCAACA ACTGGCGCTT
TGCTTTGTGG TAAGCCTGGG AGCGACATAA GCCCGATTGA TTCAGCCGAT AACGTCAAAA
ATGAAATTGA GCTTCCTGGT GTAAGAGTAG CTGGAGTGAA AGAAGAAAGT GGAAGCGAGG
GATTGCGGGA GAAAGTCAGC CTTGCGCATA CTGGTACGTC TAACGACATA CATCTTTTGT
CAAGAGGCGC CACTGATGCT GATGTGTCTA GAGATAACGC TCATGTTGGC GCAAACGCAG
TTTGCGTTGT AGAATTAAAA GCTAACGATG AACCTCCGCT AGAAGAATCG GGCGGTAACG
GAGGCCTGAC AAACGAAAGC GATGGGGTCG CTGCTTCACT CATAGAGAAA CAAGCTACCA
TCCAGATAGC TGGAGGGAAT CTTTCCGAAA CCCAAACGGA GCCAATCGAT TCGGAGGATG
GATGTATCGA CGATTCTGTC AACACTGCAG TCCAATCTGG CGAGTTGGAT GAAAAGGAGG
GAAGTGCAAC AGAACAAAAT CGGGATGAAG TGATTGCCAC CATCGACAAG AAAGCGAGCA
AAAGGCTTAT GGACAGCGCG ATCTCAACCC ACACTGAACC CACCGAATCT TCGAGTGAAA
TTTCGACAAA AAGTGCTCTG GCGAGCAGAA GCCCTCTCGT CAATAGAAAG AGGCCGCTGA
ATTCGGTTGA ATCCAACACA TGGGATGAAG ATGCTCCCAT TGAAAATGCT TTGTTTGAAA
CCCCACAGCA TTTCTTAAAT TTTTGTAAAA CAAAGCACTT TCAGTTTGAT GAGCTTCGAC
GAGCCAAACA CTCCACTTTG TCGATACTCT TTCAGCTGCA CAATCCTATG GCTTCACACG
TTCTTCAGCA GTGCGGATCG TGCTACCGAG ATATAACCTG CGATGCCAGG TACCATTGCA
ATGTTTGCTC CAACTTCGAC TTGTGCCAAG AATGCTACAG CTCAGTAATG AAGAAGGAGT
TTGTTCTGAA TGACTCCCGC TTCGCTCATG ACACGAGCCA CACGTTTTCT CCCATTGATA
CGGAAATGCT TGAAGAAACG AAAACACGCG AAGAACGTCA GAAATCCTTA ACGGCGCATG
TTGAACTCCT GGAGCACGCT GTACCTTGCC AAGGCCCACC AGCATGCTCT CTGGAGAACT
GCCAGCGCAT GAAAAAACTC GTCGAGCACG TGGGAACTTG TATGATCCAA CCAAAGAAGG
ACTGCAAGAT TTGCAGTCGA CTCCTGTCGC TATGTACAAT ACATTCGCGT TTGTGCGCTA
TTCGCGGACC TTGTCCGATT CCCTTTTGTG ACCGAATCCG AGAGCGCAAC AAACGACTAC
GCCAGCAGCA AGATCTTGTG GACGACCGGC GCCGACAAGC TCAAAATGAA TTGTACCAAT
CCTCTGAAGA GCCATCTATA ACAACTTGAG ACTGCAAGTC ACTGTTTAAC GTCAGAATGT
CGTTGCTGTA GATATGTTCC TTTTCATTGT TGATGCTGGG ATGAGTAAAG TTGGTTTTTT
AAAAGACTGC AGTAGTAGGT TACTGTTAGT TGCCAAG
 
Protein sequence
MQSNSGGMPG GSMNATSMQD MQRLQLQMAQ YQQQQQQQQR QAPVGNQLLL NNHNSVSNLN 
MQQQFPSNTN NAPTASFVNL STQSGAAGRM SNPALAMMQQ QQQGVVTGSN GASLMNSGGP
NAASMFSWNG MQQPQQGQNA SSMDASTGSS ARLMAMANMN RMSIGGGAGT ISGQGNSMNP
STSTMPNMQT LLQQQQVNAS HTPNQMGFQQ QHHLSGSQMG SSTNTNHTNG GGAQQLMLQQ
QIASLQKQMQ FQHQGGIGTV SAMQNPSISN ATVGSAGPRA ANSLQSHQQQ LLQQIQQQQH
VGPGPPSMPA QHQQPYQQHQ MSAGMQSLHQ QDSTPQNMMN MLQQQPQSHA RNNAMANVMS
DQSSQTLSRS GSLNEQQLRI HQQNLLRASS GQQTTVSDTQ EAAKSVRSQQ QSPSQPSKQH
GMHPQNATSY QPSNNIVQGP FGGMHGLPNQ HSMQSVSNQQ LNNHGKAMPM HSDGSTTLGM
SSHGNNSMYS GQMSGSNASQ QQGSDDPISI SQHSNLSAGQ LSRTHQASSN DSGQKTFLDG
SFAGGWQSND DLPDRRRVIF SILEVIRQIR PDDTSKMSNK LPHMAKSLEE HLYRSAHSKD
EYMDFSTLKE RLQAIAHGLD LHRGSSSPMV SKNHDTTHLP QQSSNPSYSN IESQQNSLQI
GFPPSLTASG PTSQQHQNAG WTGPYDVSSK DVMKIQGQNN ADNLVVQRNA ASQQSFGRIA
GSNSQHGGIM SGSNTAGPNH NSGIWPTNMG SSESLGQPSI GNVAMNGGSQ HQSSMNQGMN
DMASMSQTSQ QNDFAGSSLF IDPLQGFNWQ SGFLSDSNMP PPVGNGIVNS DYPNTPKYQD
PGVAQKQKVI LQQQQRLLLL RHASKCKAGS NCTTKFCSQM VTLWKHMKTC RDKNCKTSHC
LSSRCVLNHY RICKNQGKTS TCEVCGPVMA KIRQQERDDG TGDPLATDSS AMNYLQPSLN
ALPNVIPTKQ IGGLSQVRRS DNILENSCQS EQVQLQQLQA QQMKLQTQLD SLKQLQKQQE
QLLEQQSRIQ EQAHKVKDPS SQQAQQLQQQ QLLLHQLQKR CEQQQLQLQQ EIQSQSRTAG
LAQAQAQQFQ AAAQFRTSVQ EAQMLQSSSP IIPGSYGEPT ESKKKRHTVT KSKRISSKGK
RGGKGKGLRA AVEVLSSHDP AEDNFDPYAS PKKRGLSSSS KPAQKKRKAT SDKEADPGER
ATGTDIVEDS TLAYEGNTSL LPFMSLVSVR KHVDSLNKKT SLWSRMVTYK CLPVIQELID
DQFGWVFHDA VDPIALGLPD YFDVVKHPMH LELVKKKLEN AIYCDTDSFA HDVELVFENA
ILYNGETSEV GELANSFLVK FAQIYEKLIA GIESPQQLVK KNGEACALCG LQKRQLEPLS
LYCHGNCGMQ PIERHSSYFT DHSKSNLWCL LCYDQLHEEK IILLDDGSDI RKKDLQEFKN
DTCPEEAWIT CDECNSQVHE VCALFSRRNE AKASYTCPNC YTSKSLASQS TKSVAKFVKG
ADYLPHCKMS IDIEKGLHRT LQDLYDAKAK DEKLGAGQTE QAEGLTVRVL SNVEKKQSVG
ARMQRCFSEK GYPLEFPVRS KCIALFQKIH GVDTLLFSVY VYEYGQECPA PNKRRVYISC
LDSVQYFEPS CYRKAAYQAI IVEYLRYVKE RGFHTAHIWS CPLTPEDGYI FYCHPSHQLI
PREDMLQSWY HQLLEKAKSS GVAISTTTLY HEYFEGGADS TKIEQQRLPT CLPYFEGDYI
PGEIENILET IDEKENQSSV QKLIMSLLGQ RIMKMKDNFL VVHLHNDGVA AASEQSEDVS
KGCDGCDEKI VLSKRSSTTE PGLMRIDVRD DDVAMTEADA FPAREDPTVL KTAAPPKKVN
TPEKATRSMG EATSKSEKTE DKSVPTPGML LFEKPGSDTS LVDSAKDAAN EGVAPISVSM
GEPTAESEKR KDRYVSTAIV CEKPRSNFSL IESTKDTAET AAAPDSISIV DSKVDSKDTA
YSTTGALLCG KPGSDISPID SADNVKNEIE LPGVRVAGVK EESGSEGLRE KVSLAHTVCV
VELKANDEPP LEESGGNGGL TNESDGVAAS LIEKQATIQI AGGNLSETQT EPIDSEDGCI
DDSVNTAVQS GELDEKEGSA TEQNRDEVIA TIDKKASKRL MDSAISTHTE PTESSSEIST
KSALASRSPL VNRKRPLNSV ESNTWDEDAP IENALFETPQ HFLNFCKTKH FQFDELRRAK
HSTLSILFQL HNPMASHVLQ QCGSCYRDIT CDARYHCNVC SNFDLCQECY SSVMKKEFVL
NDSRFAHDTS HTFSPIDTEM LEETKTREER QKSLTAHVEL LEHAVPCQGP PACSLENCQR
MKKLVEHVGT CMIQPKKDCK ICSRLLSLCT IHSRLCAIRG PCPIPFCDRI RERNKRLRQQ
QDLVDDRRRQ AQNELYQSSE EPSITT