Gene PHATRDRAFT_45667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45667 
Symbol 
ID7200451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp867154 
End bp868415 
Gene Length1262 bp 
Protein Length417 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179735 
Protein GI219117898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCTTCATAAT GGCCGAGGCA GCATCAATAG GAGATGCTTT ACAGATTCTC GGTGACCCGT 
CGGGGAGGCA AGACTCTGAC TACTGGAACG CTTGGTTCAA GGCGGTTTGC CTGAATCCCG
AACATCGAGT ATTCGAGTGG TACTGCAGTA CCAATGAGGT CATCCGAGTG TTGTCCAACT
ACATTGGAGA TGCTAACATC CTTTCAGACA GACACAGGAT AATGCATCCA GGATCGGGAA
CGTCGCTGCT TCCAGTAAGA CTGTCGCAGA TCTACCCGTA TCGAAATGTG GTAGTGGACG
TATCCGAAGT CGCGATCGAC GAGATGAAAC AACTCCACCG GATGCAATTC GAAGGTGTTA
ACCAAGGAAC AAAGGCAGCT TCAGTCGAGT ACCGTGTCGC CAATCTTCTA GAGCCGGCAC
TCGATTTCGA GGCAAACTCC TTTCATTTTT GGATCGATAA AGGTTTCGTC GATGCTGTTT
TTTCAAAGGA AGGAAAAGAA GTGAACCGCT CACAAGAAGA TCATCTTTTT CTTGAAATAA
ATCGTGTTCT TACGTCGGAA GGCGGAACTG CGCTTATTGT TTCTCTGGCG GAAGATCACT
CTCTTCAATT AATTGTCAAC AATTGGCTGC GGGAGTGTAT CGCTTGGAAA GACCGTCTTG
ATGTTTGGGA GCTCACGCCT GTGAGTGGAG ATATGCCACC GTTCTGCTTC GTGCTGGCGA
AAGCCTCTGG CAATGCCGCA AAAAATGGAA GACGCGTAAA TTTTCATTAC ATACACAGTA
AAAGCCCCGA AGAGATATAT GTGAACAATG CGGAAGAAGG TATTGCGAAA ATCGGTTTTC
ATATTTCACA GTCCAGAGCG GCATTTGCGC AACGCTTGAG TTCTCCCAAC AAGCCAAAGA
TATCAATTCG AAGGATTTTG GCAATCCTGG AAATTAAGCC GTACGACGCC GATATGGATT
TAAAAGTGTT GGCGAACGTC ATACAATCTA CAGTTTGGAA AATGGCAGAC AAACTAACAA
TCCTGCCGCA GTGGTATCCC TTTCCAGGTG GAGATCTGCA GAAGATTGTT CCCGTTGCTT
ACGGCATTTC CAAACTCCAA CTCAAGTGCA TTATTCCTGA GGACGATATC GACAAACTTG
TTGAAGCAAT CAATGAGTGG GAAGGGAATG ATCAGTTTAG CGATGGTGTG CAATCGGTGG
ACGTGGACTG GGCCAATACA GTGCCTGTTG GCGACGCAAT TGAGATTTTA CGCAATCGAT
AG
 
Protein sequence
MAEAASIGDA LQILGDPSGR QDSDYWNAWF KAVCLNPEHR VFEWYCSTNE VIRVLSNYIG 
DANILSDRHR IMHPGSGTSL LPVRLSQIYP YRNVVVDVSE VAIDEMKQLH RMQFEGVNQG
TKAASVEYRV ANLLEPALDF EANSFHFWID KGFVDAVFSK EGKEVNRSQE DHLFLEINRV
LTSEGGTALI VSLAEDHSLQ LIVNNWLREC IAWKDRLDVW ELTPVSGDMP PFCFVLAKAS
GNAAKNGRRV NFHYIHSKSP EEIYVNNAEE GIAKIGFHIS QSRAAFAQRL SSPNKPKISI
RRILAILEIK PYDADMDLKV LANVIQSTVW KMADKLTILP QWYPFPGGDL QKIVPVAYGI
SKLQLKCIIP EDDIDKLVEA INEWEGNDQF SDGVQSVDVD WANTVPVGDA IEILRNR