Gene PHATRDRAFT_45638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45638 
Symbol 
ID7200401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp786398 
End bp787234 
Gene Length837 bp 
Protein Length157 aa 
Translation table 
GC content44% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179914 
Protein GI219118272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACTGTTCGAC CAACAGCGCC AAGCATTCTC ACAGTCAGTC AATGTCATGC CGTCGCAACA 
GTCATTGACT TGAATAGATA AGCGAGTGAT TTGAACCTGG TACTGTCAAG GGCGTCATGA
AAATATCGTC TTCGCTTTTT CTTGGCGTGT ACGCCTTTTA TTCCGTATGC ATTCGTTTAG
TCTTCGCTGG CCGCTCATTT CGTCTAGGGA TTCGAGATTC CTTGATGATT GCCCACAGCT
TTCATCGGCA TCCTGCTTTT GGGCCTGCTG GTGGCATGCA TGGGGCCACG TATACTTGTG
ACGTGGAGTT TTCGAAGGAT ACTTTGGATC CTGACACAAA TTGGGTGATG GATATCGGCA
AAGCTTCAGA GCTCTTGTGC ACTGTATTAG CCAAGTACAA TTTGAAAAAT CTGGATGAAG
TTTTTCCAAA CGGCCAATTG ACCACGACAG AGTTCATGTG CAAACAAATC CACATGGATC
TTGTCGATCT CATCAGAAGG GAGTTCCATG ATTTCCATGG CGAAGTTTGT GTCAAGCTAT
GGGAGTCCCA CAAAGCTTGG GCTGCTTATT CTGGTGTTGT CAAAAAATGA GGGTCATTGC
TAGTTGTCCG AGAGTCGTAT TTTGCACGCT TTATCTCATA ATAGCTCTGT TGAGACTGGA
TCGCATGTAC ACCTTTTTAT TATTCTGACT GTGAACGATC AAACCAGCTG AGTGGTCGAT
TGCGAAGTAA TGATTGATAT CTTATGCTTT CATGTGAATG AAGATCTAAA CATCGCGAAA
TCAAGCAAAT CAAATGTCAA CTAAATACCG TCATAACAAT GGCAATTTGC ATTCCTC
 
Protein sequence
MKISSSLFLG VYAFYSVCIR LVFAGRSFRL GIRDSLMIAH SFHRHPAFGP AGGMHGATYT 
CDVEFSKDTL DPDTNWVMDI GKASELLCTV LAKYNLKNLD EVFPNGQLTT TEFMCKQIHM
DLVDLIRREF HDFHGEVCVK LWESHKAWAA YSGVVKK