Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45638 |
Symbol | |
ID | 7200401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 786398 |
End bp | 787234 |
Gene Length | 837 bp |
Protein Length | 157 aa |
Translation table | |
GC content | 44% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179914 |
Protein GI | 219118272 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ACTGTTCGAC CAACAGCGCC AAGCATTCTC ACAGTCAGTC AATGTCATGC CGTCGCAACA GTCATTGACT TGAATAGATA AGCGAGTGAT TTGAACCTGG TACTGTCAAG GGCGTCATGA AAATATCGTC TTCGCTTTTT CTTGGCGTGT ACGCCTTTTA TTCCGTATGC ATTCGTTTAG TCTTCGCTGG CCGCTCATTT CGTCTAGGGA TTCGAGATTC CTTGATGATT GCCCACAGCT TTCATCGGCA TCCTGCTTTT GGGCCTGCTG GTGGCATGCA TGGGGCCACG TATACTTGTG ACGTGGAGTT TTCGAAGGAT ACTTTGGATC CTGACACAAA TTGGGTGATG GATATCGGCA AAGCTTCAGA GCTCTTGTGC ACTGTATTAG CCAAGTACAA TTTGAAAAAT CTGGATGAAG TTTTTCCAAA CGGCCAATTG ACCACGACAG AGTTCATGTG CAAACAAATC CACATGGATC TTGTCGATCT CATCAGAAGG GAGTTCCATG ATTTCCATGG CGAAGTTTGT GTCAAGCTAT GGGAGTCCCA CAAAGCTTGG GCTGCTTATT CTGGTGTTGT CAAAAAATGA GGGTCATTGC TAGTTGTCCG AGAGTCGTAT TTTGCACGCT TTATCTCATA ATAGCTCTGT TGAGACTGGA TCGCATGTAC ACCTTTTTAT TATTCTGACT GTGAACGATC AAACCAGCTG AGTGGTCGAT TGCGAAGTAA TGATTGATAT CTTATGCTTT CATGTGAATG AAGATCTAAA CATCGCGAAA TCAAGCAAAT CAAATGTCAA CTAAATACCG TCATAACAAT GGCAATTTGC ATTCCTC
|
Protein sequence | MKISSSLFLG VYAFYSVCIR LVFAGRSFRL GIRDSLMIAH SFHRHPAFGP AGGMHGATYT CDVEFSKDTL DPDTNWVMDI GKASELLCTV LAKYNLKNLD EVFPNGQLTT TEFMCKQIHM DLVDLIRREF HDFHGEVCVK LWESHKAWAA YSGVVKK
|
| |