Gene PHATRDRAFT_45636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45636 
Symbol 
ID7200399 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp783249 
End bp784403 
Gene Length1155 bp 
Protein Length154 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179912 
Protein GI219118267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACG TGGTCGGCCT GTGCCTGATC CAGATTCTAG CTCTCTGTTG GGGAGATAGC 
TTGGCTTCAA CGGAGCAATC TAGGTACTGT GTAGGAGTTT CCGATTCTGA GTTCGTGTGC
TCCGATGATC CGATCGGTAC CCTTTTGAGT GCACTGTCTG GAGAAGACCC GAACCTCCGA
GCGCCTCAAT TTATCCCAGG CGTCCCCCAA CGAATCGACG GTACTGATGC CGAACAGGCA
GCAATCAAGG ATGTGTTGGA TAGGATGGAC AAATACTTCT TCGATGAAAT TTTTTCAAAT
CCTGAGTACA AAGAGGTGCG ATCTGAGTGG TAAGAATTCT GGTTGAGTTA TTCTCTTTCG
CTGCGCTGTG TCACGAATTC TCTCTATCTG ACTTGTCTTT CTTTACATTA GTTGGAACAC
CAACGAGCTT TGTGGCTTTT GGGCGGCAAT TGGTGAATGT GAATCTAATC GAGTCTTCAT
GCTACCAAAT TGTGCGGCTG CATGTCGCTT TTGTTTGCTG CTACATACGA ATATTGGGGA
AGAATAGGGG CATTGGTACC GAGCAGGTCG ACTACTATTG AATAGCTCCC TTTCTTAGAT
AAATGGACCT CCGACGTCGA ACAAGTACGG CACCCTTTTT TGGTAAAAAT CTTGTCATGT
TCACAGTCAG TCTGGTTGAA TTCCAGGATT ACGACTACAA GACTCAATCC CTGACCTGAA
GAGGCCTCGT CCTTGATAAT TCGCCCCTTT ATTTCTGATC TCAGCTTCGT GAAGATGAGC
ACAGTGATCT TTTCTTTGTC GAAAGCGCCT TCCTTATCCT GGGCCTCTCT GCTCTAGAGA
AGGAAATACG TTTTTTTTTA CCATGGACTC GCAATTGATC GATTCTCCTC GAGGTGAAAC
TCGTTCGGCT TTCACATGGC TCATTATAGA GATGAGAGGT GCGACTAGCT AGCATTCCCC
TTTGTCCGGA TATCCTTTGC TTACATAGCC TGTAACCAAC AGGATATACC CCGCGTTCGT
TGACAGAATA GCTGTCTTCT TTGTTGCACT AGAATACAGC TGTGACACGA GAGTTGGACT
TTTTCCCGAC AGTTTCAACA GGATAAACTT CGCACTCATC GGTAGAATAG GTCGATGTCT
TTTATGTTGC ATTTT
 
Protein sequence
MKNVVGLCLI QILALCWGDS LASTEQSRYC VGVSDSEFVC SDDPIGTLLS ALSGEDPNLR 
APQFIPGVPQ RIDGTDAEQA AIKDVLDRMD KYFFDEIFSN PEYKEVRSEC WNTNELCGFW
AAIGECESNR VFMLPNCAAA CRFCLLLHTN IGEE