Gene PHATRDRAFT_45629 details

Gene Information

• Locus tag: PHATRDRAFT_45629
• ID: 7200666
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 762862
• End bp: 769342
• Gene Length: 6481 bp
• Protein Length: 2144 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002179711
• Protein GI: 219117848

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCATT TTGCTCTGGT GCCAAAATCG AGCACGACTG TGCCTTTGCA TGATCAAGAG 
AACAGTTCTT GTATTCGGGC TCCTCGGGTT CAGGCTGAGC TAACGAGCCT ATACGAGACA 
TACGCTTCCT TGTATCCCAA CCCACGTCTC ATGGAAGAGT CCCAGGATCG AGACAACTTG 
TTACGCGCAA TATCATCCGC ATCGCATGCC GTACAATTGA ACTCGCCCAC ACAGAAGAAA 
ACAGGCTTGT TCGGCTGGTT CAGATTTTCG TCGGATCTGG CGAAGCCCCT AGCGATACAA 
GCTTTCTCAG ATCAAGGAAA GGATGACAAA CGATTACGGT ATGCGGAAGG AATGAGCGAG 
GACAATCTCC AGCTGCTAGG AACCCACCTG GCGTCTCTTG ATCCTTCCTG TATACCTGCA 
GAGGCTTACA GCATGGCGCG ATTTCACCTC GTCTCAGGAC GAACGAAAAG TGTGAACGTG 
GCTCGGGCAG CGATATGGCA GCCACCGCAT GATACCACGA CACTTTCTGT TGTGGTTACA 
GGCCTTGGAA GCATAGTGGA GTTGGTCTTA GATGAAAGCA ACGAACATGA ATTGGATGAG 
GAGAAAGGAG AAGTTCAATA TACTTCAGAC CGGAATGAGC TGCTAGAACA CTTTCGCCAG 
ATATCGGCTA CTTCATATTC GGCCATCTAT GCTCGCGCCA GCACTGTGGG TCCTAACTTC 
TTGGTTGTGT CATGGGGACT GGAAGATGGT GTTGTGGTTT GTTACCGTCG GGTCAAACTC 
GCAGGCGACC AGAACACACA CTCATGGCAA GCCTGTGGGA TGCTCAGTCC AACCGACGCA 
GTACAAACAC ATTTGGGTGA CGACGTCTTT GTCCAAGATG AATCGGCTTC TTTGCGAGTG 
TCGGATATAG TACCCTTGAT TGTCGAGACG GGAAAGGTGC CAGCAGCGAC TATCGTGGTA 
TCTCGTTTGG GGGGGACCAT TGAGATCGTT CCACTGCCTT CTCGTCTCTG GTACGGCCCC 
ACCCTCCAGC AGCCCGCGTT AAAGCCGCCC CGAATACAAG TACGACGGGG GGAAGCACTT 
CACTACGCAA TTGGCGAGCT GACAGACTTG GCATCCTTTC AAAATCGGAT CACGGCGTTG 
ACGACGAGTG ACTATCATAC TGACGTGCTA GGCTTGGAGA CGTTTCGCAC AAGTGTCACT 
AGAGGAACGA CGTGGGATAA GGAAGCGTAT CCTCAGGGGC CGCCAGCGGA ACATATTATG 
GCCGCATTTG GTGCAAAAAA CGGTAGAGAA GCCGTAACGT TTTGGTCTGT CAGCACCATG 
CTGATGGATG AGACAACAAC AAAAGAGAAC TGTGATGAGT TCGGCTTTTT GCTTCATGCA 
AATATGCTCG AAGCTATTGA CGTCGGTGCA GTTGGACCAC CAGTCAGTGT GTTTGCTAGC 
GATCCAATTA TGCGGCACTG GAGGCGGCCA CGGCATGTGG AGCTTTGGGC CGACGCTGAG 
CAAGGGGTGT TGGATGAAGA AAGTTCTAAG CGAATCACCA CAATATCGGT GTCAGCACCG 
ATAGTGACAA TACGCTTTAC AACCGCGAGT AGCTCATTGG AAATGGCCAT GTTGGACTGG 
AACGGTGGGG TAACGATGAT GGATTGCCGC TTGCTGGAAC ATACAGCATC GCAAACCTTA 
GCGGAAAACG AATTTAAGAT TGTTTATCAA CCTGGTAGTC CCGAAAATAT CGAACCGTTG 
GTGGAATCGA TCGTAGATCG TTCGCAGTCA CTCAAGTATT TGGTGGATGA GTATGGTGTG 
TCTCGAGCGA TCGATTTACG GTGGTGGTGT CCTCCTGAGT GTTTGCCGTT GCTGGCAATC 
TTGATAGAAT CTCCGCTGCG TCTTTGCTTT CTTTCGTTGG AACAAATCGC CAAGGGCACA 
GTTCCTTGCA GCCTTCGACT CGGAATGGCC TCTGGAACGT TACTGTCTTC TTCCTTAAAT 
GACGACTTAC TTTTGACATT GCTAGGATGC AAAGGGGGGA GAAGGCAGTT GTCTCTCTTT 
GCCCTCCATC CGCTCGACAC TCGAACGACT GTGGAATCGC TCTTTAACGA ATCTAAATTC 
GAAGAAGCAA TCGCCGCCAT TAGTCGGCTT GCCGTGCGTG ACCAAGTGAT TCTCTCAGAT 
ATGGTTGAAG AGTGTAACAA GCATTTGTGG CGAACCACAC GGGACTTTCG CTACTTGAGT 
AACAGTTCTG ATGATGCTTT TGTCGTGCAA GAGGCCATGG TTGATGTAGA ATATCTTGCC 
GAATGCTACG ACTTCGATAC CTATCTTCGG TTGCAAAATG TTGCTCTAAA TCGGATCGAT 
TATGGAAGGT TGGAGGCTTC ATTCGCATTG AAAGGATTCT TTGGGCCGGA GTCCATCAGG 
CGCAACTTGA GACAACGATT GGTGCTCTTG GGGACATATC GACTCCTCTG TAAGCGCTTA 
TTCTCAACAC CGTCGCTTGC ACATTTTCTG GAAAAGTTCG TCTCAGTCAA CATAGCCGAT 
CTGGCTACAA GCCTGGCTAG AGCCGGAGAT ATTGAAGCTT TGTCAATTGT GGTGTTTCGC 
CACGAAATCG ACACTGTCAG ATACTTGAGG GTGCTTTGTG AGATACATCC GACAATAGCG 
TTGTGTCGAT ACCTTCATCT TCTTCCAGTT TGGCAAGAAA ATGTTGAAGC AAAAGGCTTT 
CTCTATACGG GTAGTAAGGG ATATGTTTTG CGAAATTGGG CCGAAATGCC AGATACGTTG 
TCGAGCTCCA TTGGCTTCCA ACTCCTCGTG GACGAAGAAG ATCGTGATGC GGTCCAGAAA 
CTGTACGCAG AAATCGGACC CGATGAAAGA TTGAAAAGTA GTTTGTCGTC CTGCTGGCAA 
ATACTAAGAG ATTGGTACTC TTCATGGGCG CATATACTTT GCGACTTTGT CTGCGACCTT 
TCTTCGACAA TCAAGTTCTG CAATGTTTCA CTTAAGGCCC TCCAATGCGA GAGTGCAGAG 
AAGAGAGACG CTTTGGACGT TTTGGATGCC AGTCAGAATC ATTCAGAAAT TCATCGAATT 
TTGCGCCGGT CGGAGGCTCT ACAACTTTTG CTCGTTGAAA TCCTTGATGT CAACAATCCT 
CCAGTAACAC ATTCGACGAT GGGCCTGAAG GAGCTTGAGT CGCTCGACAC TCGCTCCGTA 
GTACAGCTGG CGCTGACAGG AGTCGTTGGT TTCGATCAAG TTTTGGCACG ATTTCAATAT 
GTTCTTATCC CATTGCTGCA TCCAACGCAC GCAACGAGAG ACGACACCGG CTTGTACGCT 
GAACTAGACA GGGAACTTGC TTTATATTGT TTTACAATCT TTGAAGCCGC TCCCATGGAA 
AATTCTAGTG ATACGTGGGA CCGTACTCAA AGAGCCATAG AGATCTGCAC CGCAATTGTC 
TCTTTGAGTA CCACAGGAAT TCCTGCCAAG CAGCGGGTTG TAAAGGACAG CCGAATTTTG 
ATGGACATTG TTACGAGACT GTTTGAAAAT ACCGTTGCAA TCATTTGTCA ACTATGTCCA 
AAGCTTACCA ATGCGAGAGC GATTGTGGAA ACGCTTTGGA TGGCCTACGA ATCGTTACCA 
AAGCATCTAG GGAATGGTAG TGCCGAAGAG GTTGACAACA TGTACCGTTC GCTTGTACTA 
ATTGATATTC TTTCTCAATG GCCAGACTGC TCACCATTTC TTATTGTGTC GAAAAATGAT 
TCATTGCGGT CTGGCCGGGA AGGCCAAATA CGTGCCGGGA AGCAAGCTGT TGAAAGCATT 
TGTACGTCGT TCTGCATGCA GGTAGGCTTG AAATTCTCAA GAATCGAAAA CGTTGAGCAT 
GGACAGCTTC TTTCGATGCT AATAGCAGAC ATCCAGCAAA TCAATCAACA ATGCTGTGAC 
GGGAATCTAA GTACAGTGGA AATCGTGACT GTTCGTCTTT TTGAGGTTCT CCTACAGCAG 
CACCAGGTAG TACTCATACA CAAACTTCTC ACATGCTATG GCGCCCTCGT TGACAAAGCA 
ATGGCGTCAA ATTCTGTGAT GGCGTTCGTC AACGAAGCAG TATTTGAAGA AACAAATGAT 
GAATCAACAC TGTCAGCGGC AATGGCATGC CAAGATGTCT TATATCCTTG GTTTCCGAAC 
TTGCATTCGG AATTTAAATC GGTCCGTGTT TATATGGACG TTGCAAAATT CATAAATTCA 
GCGTTGGCAA CTCATTGGGT GTCTCCTGGA GTCCTTCAAA AGCAGCTGCC ACTGGATGTA 
GTTGAGTCTA TGCTGATCTC TTACCCATCG GTCGTAGTCT ACGGTTACAA GAATTGGGCA 
GATGAAAAGT TTGCAAAAGA TGCCAACAAA TTGATTCGTG ACTTCTTTAA AGTGCAGGAC 
TTAGCTTCTG AGGATGTGGC GGCGTGGGAT GGCCATAAGT TGCCCTCGTT GCCAGGCACC 
TTTATCTTAC ACATGGCGCA GCGTCTTGAT CTGACTGATA CAAATGCGTT TGTTTTTGTG 
AAGAACAGGA TGATACACCA TGCACTCATC GGAAAGCACT GCGGTGCCGC CGCGGCCATT 
TGCCGAAGCC TTTTCCACGA TGAGCTAGAC TCTGTCTCGC GTGATTTGTC CTTGGCCGTC 
GTTGATGCGG CATCTGCCAT TATCCGAGAG GATTCTTTTG ACGATGCTGA GACCAAATAT 
GAACTATGTA AACTCGCTTT GTCAAGCCGT ATTGGACCAC TATCCGTGGA GTCGCCACCA 
GCACATAACG AGCTACTGGG ATACTATTCA AGCATTGAAT ACTTGTGTAC CTCTACCACT 
CCCACAAATG CTTTCGCGGC TTCAAGCCTT TTTCAGGATA CTCTTGAGCA GTACTCTATC 
AACTTTTCGG AATTGTTGCG CTCTCTACGT CATCAAAGCA TGTACAACAC GGTCGACGAT 
GCCCTCTTGA GCACGATCGC TAGATATTCC ATGTTTTGGT GCATATTTCA GTGTTCAAAG 
TACGAGGAAG CTGATCACGT TGCTGTGCAG CAAGCTGAAG TGACCAGCGC TGCTCAACTC 
GCCTGCGGAC TTCTTTTCTA CATCAAAGAT TCTGATATTG CAATAGGATG CCTTAAAGAG 
GTTCAATCCG TGCTTCAAGA AGAGTTTGCG GCTATCGTGT CATCACTTCC TTCCCCGAAC 
TCAGACTATG TCCGGCCTGA TTGTAGCATC GTTCACAAGC TTGTCGGGCG CGGCTACACC 
GAAACGGGCG CCAAAAGAGC CTCATTTGTG ACAAACAATG AGAGCTACGA AGCTGCTCTT 
CAGTGGGCCG TAGCACACTC ACTTGATCCA GATTTTGACA ACCCTCTTGT TTTGACGAAA 
GCCGCGGACA CAAAATGGAT AGATCAAGCT ACTATGCAAC AGCTCCGTGC GACACTGGAA 
GCATCGACTC GTATTATATC TAAGAGCTCT GAGCTAGACG AGCTAATTGC GAAGTGGAAA 
GAGGGTAGTA TACTACCCTT CCAAAGTGTT CAGTCCGGAA AGCTTGAGTC TTTCTCGAGA 
CGCTACCATA GGCATGATTT TCCCACTGGA AGACGGACTG AAGAACATTC AAAAATTCTT 
CCTCATATCG GATCCTCTTC GCAGAATTTG TTGGTAGAGC AAAGTTGGCG AAGCGAAAGC 
GCAGACATGT CGTTCGTCGA CGAGTTGGAC GTCAGTGCTA TTCCCAATCG AGCAGGAGAT 
GTTTACGAGA AGGTATTGTT GTTAGACGAG AAAGATGTGG ATGGCAAGCA AGAGTCACCT 
GACCCCATAG ACCGGATTCG TCAAAAAAAC TCAATCGGCA AGGAGCAGCC CCTGGTCCCC 
GGACAGAGTG GAGCAATGAT ATTTCAGGCT GCGCAACCAA AGGAAAACCT CGATATCGGT 
TACAAAAGAA AAGTTCTTTT TGCTCGCCAG GAAGACGGTA TCCAGACAAG CAACGAAAGA 
AGCACTTCGT TGGCAGGCCA CGATGGTACC GAACGATCAC GGGAAGCTAG TAATACGACT 
GGCGCAACAC AACTTACTAC TGAGAATGTT TTAAAGCCAT CTCATTGGAC CGCCGAAGCG 
AGTAAACGAA ACCAGGCTTT GCGAGATTCT TTTGAAAGGC ACGAGTCACT GGGAGTGGGG 
GAAATTAAAA GCCCTGACAT ACCTTTTCTA CGGGAGCAAC GGCGCGCTTT GCTCCGTTCT 
AGTCGCGTTG CACGAGCCCC ATCGTCCGCA CCAGCGACGG ACGCGGACGA ACGCCGCCGC 
TTAATCGAAG AAGGTCGCCG CTTGCTACTA CAAGCCCGAG GTGCTGGCGC CATCGCATCT 
CAGCGCACTT CTCATCGTAA TCCGCTCCTT TCTAACACGG CTGATTCGGC GTCACCTAAA 
CCTCTACTGG CACAAGATGA ACCAAATCTA AAAGCACCCT CCTCCAATGA AGGAGGGGAC 
ATTGACGATG TTTGATAGCT GCAAGATAGG AATTTAAAGC ATGAAAGAAA ACACGTTGCT 
G 

 

Protein sequence

MSHFALVPKS STTVPLHDQE NSSCIRAPRV QAELTSLYET YASLYPNPRL MEESQDRDNL 
LRAISSASHA VQLNSPTQKK TGLFGWFRFS SDLAKPLAIQ AFSDQGKDDK RLRYAEGMSE 
DNLQLLGTHL ASLDPSCIPA EAYSMARFHL VSGRTKSVNV ARAAIWQPPH DTTTLSVVVT 
GLGSIVELVL DESNEHELDE EKGEVQYTSD RNELLEHFRQ ISATSYSAIY ARASTVGPNF 
LVVSWGLEDG VVVCYRRVKL AGDQNTHSWQ ACGMLSPTDA VQTHLGDDVF VQDESASLRV 
SDIVPLIVET GKVPAATIVV SRLGGTIEIV PLPSRLWYGP TLQQPALKPP RIQVRRGEAL 
HYAIGELTDL ASFQNRITAL TTSDYHTDVL GLETFRTSVT RGTTWDKEAY PQGPPAEHIM 
AAFGAKNGRE AVTFWSVSTM LMDETTTKEN CDEFGFLLHA NMLEAIDVGA VGPPVSVFAS 
DPIMRHWRRP RHVELWADAE QGVLDEESSK RITTISVSAP IVTIRFTTAS SSLEMAMLDW 
NGGVTMMDCR LLEHTASQTL AENEFKIVYQ PGSPENIEPL VESIVDRSQS LKYLVDEYGV 
SRAIDLRWWC PPECLPLLAI LIESPLRLCF LSLEQIAKGT VPCSLRLGMA SGTLLSSSLN 
DDLLLTLLGC KGGRRQLSLF ALHPLDTRTT VESLFNESKF EEAIAAISRL AVRDQVILSD 
MVEECNKHLW RTTRDFRYLS NSSDDAFVVQ EAMVDVEYLA ECYDFDTYLR LQNVALNRID 
YGRLEASFAL KGFFGPESIR RNLRQRLVLL GTYRLLCKRL FSTPSLAHFL EKFVSVNIAD 
LATSLARAGD IEALSIVVFR HEIDTVRYLR VLCEIHPTIA LCRYLHLLPV WQENVEAKGF 
LYTGSKGYVL RNWAEMPDTL SSSIGFQLLV DEEDRDAVQK LYAEIGPDER LKSSLSSCWQ 
ILRDWYSSWA HILCDFVCDL SSTIKFCNVS LKALQCESAE KRDALDVLDA SQNHSEIHRI 
LRRSEALQLL LVEILDVNNP PVTHSTMGLK ELESLDTRSV VQLALTGVVG FDQVLARFQY 
VLIPLLHPTH ATRDDTGLYA ELDRELALYC FTIFEAAPME NSSDTWDRTQ RAIEICTAIV 
SLSTTGIPAK QRVVKDSRIL MDIVTRLFEN TVAIICQLCP KLTNARAIVE TLWMAYESLP 
KHLGNGSAEE VDNMYRSLVL IDILSQWPDC SPFLIVSKND SLRSGREGQI RAGKQAVESI 
CTSFCMQVGL KFSRIENVEH GQLLSMLIAD IQQINQQCCD GNLSTVEIVT VRLFEVLLQQ 
HQVVLIHKLL TCYGALVDKA MASNSVMAFV NEAVFEETND ESTLSAAMAC QDVLYPWFPN 
LHSEFKSVRV YMDVAKFINS ALATHWVSPG VLQKQLPLDV VESMLISYPS VVVYGYKNWA 
DEKFAKDANK LIRDFFKVQD LASEDVAAWD GHKLPSLPGT FILHMAQRLD LTDTNAFVFV 
KNRMIHHALI GKHCGAAAAI CRSLFHDELD SVSRDLSLAV VDAASAIIRE DSFDDAETKY 
ELCKLALSSR IGPLSVESPP AHNELLGYYS SIEYLCTSTT PTNAFAASSL FQDTLEQYSI 
NFSELLRSLR HQSMYNTVDD ALLSTIARYS MFWCIFQCSK YEEADHVAVQ QAEVTSAAQL 
ACGLLFYIKD SDIAIGCLKE VQSVLQEEFA AIVSSLPSPN SDYVRPDCSI VHKLVGRGYT 
ETGAKRASFV TNNESYEAAL QWAVAHSLDP DFDNPLVLTK AADTKWIDQA TMQQLRATLE 
ASTRIISKSS ELDELIAKWK EGSILPFQSV QSGKLESFSR RYHRHDFPTG RRTEEHSKIL 
PHIGSSSQNL LVEQSWRSES ADMSFVDELD VSAIPNRAGD VYEKVLLLDE KDVDGKQESP 
DPIDRIRQKN SIGKEQPLVP GQSGAMIFQA AQPKENLDIG YKRKVLFARQ EDGIQTSNER 
STSLAGHDGT ERSREASNTT GATQLTTENV LKPSHWTAEA SKRNQALRDS FERHESLGVG 
EIKSPDIPFL REQRRALLRS SRVARAPSSA PATDADERRR LIEEGRRLLL QARGAGAIAS 
QRTSHRNPLL SNTADSASPK PLLAQDEPNL KAPSSNEGGD IDDV