Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45624 |
Symbol | |
ID | 7200663 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 746980 |
End bp | 748422 |
Gene Length | 1443 bp |
Protein Length | 298 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179708 |
Protein GI | 219117842 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.322694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATTGAGTATC CTATGCCCCA ACCCGCCGCT GGACAGTGAC TACCTTCCTT TTTCAGGTCG ACACCAGTGC ACTATCAAAT CTACACTCGC ACTAGGTTTT GTTGGAAACA TCCCACAACA ACAACGACAT GAACGACGAA CCAGAGATTG TTGTTGACTT TGCGGCGGCT GAGGAAGTCG CACCATTGAC AGAGGAGATC CAAAACCATG CGGATCCGAG TAAGTGAAAC CAGACCAAAG CCGATTGATT ACCTGTCTGA ATCATCCCTA CTATTGTTCT CATCATCCAA GCACTTGATC GTTGATTGTT GATAGTGGGC TCGGGGTTTC TCTGGTACAC ACCGCCTTTG GCGAGCACCA AGGAGCATCG TACGGGTGGG CATGAGTGGA TGATATCGGG ACACGATATG CAGGTGTTGA CCACAACCGT CCCCCCTGGC GAACAAGTCG TGACGGAAAT AGGATCCTTC ATGTACGGAT CGGTCGACAT GAAGACTAGC GTCGAATTGA CACTATGCAG TCGGGTTGGT TTTGCCGGAG GGTTGTCGCG GATCTTGGGA GGCGAATCTT GTGTCAAAGT AATGCTCACC AACGCATCGA ACGAAGAAGG TTACGTGGGT ATTACACCCA ACTTTCCAGC CAAGATTGTT CCCATCAAGG TAAGCATTGT TCGTAAGAAA GCTGATCGTC AACTCTTCAC AGTGTTCTGC TCTAATGTGA TGCCCTGAAC CTAATGTATC GTCTACGTGT AGTTTGGACA TCACATCAGC CCCGATCACG CTTTGATTTC TCAAGGCGGT GCTTATATGA GTCATCTCGG AGACGTAAAC GTCGGTAAGT TACTTACGGG AGATAATTCA GGCAATCTCG AAGGAAACAA TGCCTCATTG AAATACTTTG CTTGACAGGC TGCGATTTGG ATGCCAGTCT CCGTACGTGT TGCTGCGCTG GCTTTGGCTG CTTTCGACAA AAGATTACGG GTAGCGATGA GAGTATCGCC TTTCTCGCAG CGGGTGGTAC CCTGATTTAT CGGTATTTGT CAGAAAACGA AACCATCACG GTGGATAGTC GCTCCGTTGT GGCTATGGAA GAGACCGTCA CCTTGGGAAT CGCTCCCAAT GGTCGGATCT GCATGTGTTG TTTGGGAGGG GAAGGGTGTT TTTCCACCAC CCTCACTGGA CCCGGAAAAG TCTTTATGCA GGTAAGATAC GTTCGTAAAT AGAGAACCCC TTACAAGGAA TAACACGGAC TAACAACAGA GTTTGCCTTG GGATTTACAG AGTATGAACT TTCAAAAATT CCGAGACGCT GTCCAAACAA CAGTCATTGA CGATCGGGGC GACGGGAGTG AGAGTGCTTT TAACTAAAGT TCCGTATGGC GGTGAAGCAT TCATTAATAC GTCTCGTGGA AATACTTAAG TAATAGCAGA AAAAGTTTGT TTT
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Protein sequence | MNDEPEIVVD FAAAEEVAPL TEEIQNHADP MGSGFLWYTP PLASTKEHRT GGHEWMISGH DMQVLTTTVP PGEQVVTEIG SFMYGSVDMK TSVELTLCSR VGFAGGLSRI LGGESCVKVM LTNASNEEGY VGITPNFPAK IVPIKFGHHI SPDHALISQG GAYMSHLGDV NVGCDLDASL RTCCCAGFGC FRQKITGSDE SIAFLAAGGT LIYRYLSENE TITVDSRSVV AMEETVTLGI APNGRICMCC LGGEGCFSTT LTGPGKVFMQ SMNFQKFRDA VQTTVIDDRG DGSESAFN
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