Gene PHATRDRAFT_45624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45624 
Symbol 
ID7200663 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp746980 
End bp748422 
Gene Length1443 bp 
Protein Length298 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179708 
Protein GI219117842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.322694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTGAGTATC CTATGCCCCA ACCCGCCGCT GGACAGTGAC TACCTTCCTT TTTCAGGTCG 
ACACCAGTGC ACTATCAAAT CTACACTCGC ACTAGGTTTT GTTGGAAACA TCCCACAACA
ACAACGACAT GAACGACGAA CCAGAGATTG TTGTTGACTT TGCGGCGGCT GAGGAAGTCG
CACCATTGAC AGAGGAGATC CAAAACCATG CGGATCCGAG TAAGTGAAAC CAGACCAAAG
CCGATTGATT ACCTGTCTGA ATCATCCCTA CTATTGTTCT CATCATCCAA GCACTTGATC
GTTGATTGTT GATAGTGGGC TCGGGGTTTC TCTGGTACAC ACCGCCTTTG GCGAGCACCA
AGGAGCATCG TACGGGTGGG CATGAGTGGA TGATATCGGG ACACGATATG CAGGTGTTGA
CCACAACCGT CCCCCCTGGC GAACAAGTCG TGACGGAAAT AGGATCCTTC ATGTACGGAT
CGGTCGACAT GAAGACTAGC GTCGAATTGA CACTATGCAG TCGGGTTGGT TTTGCCGGAG
GGTTGTCGCG GATCTTGGGA GGCGAATCTT GTGTCAAAGT AATGCTCACC AACGCATCGA
ACGAAGAAGG TTACGTGGGT ATTACACCCA ACTTTCCAGC CAAGATTGTT CCCATCAAGG
TAAGCATTGT TCGTAAGAAA GCTGATCGTC AACTCTTCAC AGTGTTCTGC TCTAATGTGA
TGCCCTGAAC CTAATGTATC GTCTACGTGT AGTTTGGACA TCACATCAGC CCCGATCACG
CTTTGATTTC TCAAGGCGGT GCTTATATGA GTCATCTCGG AGACGTAAAC GTCGGTAAGT
TACTTACGGG AGATAATTCA GGCAATCTCG AAGGAAACAA TGCCTCATTG AAATACTTTG
CTTGACAGGC TGCGATTTGG ATGCCAGTCT CCGTACGTGT TGCTGCGCTG GCTTTGGCTG
CTTTCGACAA AAGATTACGG GTAGCGATGA GAGTATCGCC TTTCTCGCAG CGGGTGGTAC
CCTGATTTAT CGGTATTTGT CAGAAAACGA AACCATCACG GTGGATAGTC GCTCCGTTGT
GGCTATGGAA GAGACCGTCA CCTTGGGAAT CGCTCCCAAT GGTCGGATCT GCATGTGTTG
TTTGGGAGGG GAAGGGTGTT TTTCCACCAC CCTCACTGGA CCCGGAAAAG TCTTTATGCA
GGTAAGATAC GTTCGTAAAT AGAGAACCCC TTACAAGGAA TAACACGGAC TAACAACAGA
GTTTGCCTTG GGATTTACAG AGTATGAACT TTCAAAAATT CCGAGACGCT GTCCAAACAA
CAGTCATTGA CGATCGGGGC GACGGGAGTG AGAGTGCTTT TAACTAAAGT TCCGTATGGC
GGTGAAGCAT TCATTAATAC GTCTCGTGGA AATACTTAAG TAATAGCAGA AAAAGTTTGT
TTT
 
Protein sequence
MNDEPEIVVD FAAAEEVAPL TEEIQNHADP MGSGFLWYTP PLASTKEHRT GGHEWMISGH 
DMQVLTTTVP PGEQVVTEIG SFMYGSVDMK TSVELTLCSR VGFAGGLSRI LGGESCVKVM
LTNASNEEGY VGITPNFPAK IVPIKFGHHI SPDHALISQG GAYMSHLGDV NVGCDLDASL
RTCCCAGFGC FRQKITGSDE SIAFLAAGGT LIYRYLSENE TITVDSRSVV AMEETVTLGI
APNGRICMCC LGGEGCFSTT LTGPGKVFMQ SMNFQKFRDA VQTTVIDDRG DGSESAFN