Gene PHATRDRAFT_45614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45614 
Symbol 
ID7200655 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp719773 
End bp721252 
Gene Length1480 bp 
Protein Length386 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179901 
Protein GI219118244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.164661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACTGCCCTT TGCTTGAATA ACTGATGGAC TTTATTAGTG AAGGGCGATG TCAGCTTAAC 
AATAAGAACA GAGTATTTTG ATGAACAGGA AACGTCCGTT GCTGTGGGTC TGACATTAGG
CAATCAGCAT GCTTCGCCTT CGCACCACTT TCATGTTCAC GATAGCAGGC TCGGTCATGG
CGCTGCTGGT GAATCGTGTT CAAGTAGCTC TTATCTTATT CGACGAATCA GATCCTCTGT
ATACACGCGA TCCTTCCTTT ACACCGACAG AACCTGACCC CGAGGGAAGA CAAGATACTT
TTTCCTTCAA AAATCTTTCA AATTTCATTG CGTTGGAACC AACCCCTCGC CCTCGTGTTG
AAAGCCTCGT CAATGGACCC AACATTACCG GTGATGTTGC ATGGCTAATG CATCTAGCTG
TGGTTGGGTT TGCCAAATGT GGGACCACTG CCATGCAAGC TTATTTTGAT CGTCATCCTC
AAATTTCGAT GTTGGATGGA GAACATTGCT CAATCCGCGA CGAAGGCTAC GCCGCATCCA
ATCTAGTCAA GAAGTTGGCG GAAGAACTCC CCCGTGGAAA CTACATTCGC GGCGCCAAAT
GTCCCTCTTA TCTAGAAATT CCCCAAGCCT TACACACCTT ATCTACACTA TTTCCAAATG
CTCGTTTTGT TGTGGGGGTG CGACACCCTG TTTTGTGGTA CGTGGGACAA GTGCCATGCT
TTGTTTTCGG TCAATTGCTG TCTAAATTTA TTCTTTGCCT CACACTCGCG AGAACAGGTT
CGAGTCATTT TATAATTGTA TGTACTTTGT GCGGGATATT AACCTGATTT CGTTGTTGTG
CAGCTAACAG GTGATTGCTG CCCTTTCAGT TCGCACTAGA CTAGATAGGT TTCAGCTGCT
TCCAGCATTG GAGCTTATAG GAGATTGTGA GAAAGTGGGA CCTCGCTACA AGACTGGAGG
TGTGTGTACA CATCAAGCCA AGTTTCACGA ACCGCTCGCT CTTCTGGGGA AAACAAAAAT
GTCTACACCT GAGGAGCAGC AGTATTTTCC GAAAGGATTC AGCTCTTTTG TTAATCAGAC
CGGATCCTCT GGGCACGAAA TATTTCTGTA CGATATCTCT CAAATAGCTG ATAACAATGA
AAGACGACAA CGACAGTTTC GCGACGATCT TCAACGATTT CTGCACGTTG ACGAGCCATT
TTCTCCTCTT AGTGAAGATA AAGAGAGTCG TCGGAGATTG AGCGGTTTGG AAACGAGCAC
TTTCCCGAAC GCTCACAAGC GCATTAACAT ATGCGATCGC AAATACGATG GCTTGCGCGA
CGTGCTCTTG AAGATAGGAA AAGATGCGTC AAGATGGATA AGACAGTATT TTATTCATGC
AGGAGGAGTG CATGTGAGCT CAGTTGAGTT TCTTGATCAG GCTTTGGCCC GATGGGAAAT
AGATCCGTGT GAGCTACGGC TGAAGAAAGC ACTAAACTGA
 
Protein sequence
MLRLRTTFMF TIAGSVMALL VNRVQVALIL FDESDPLYTR DPSFTPTEPD PEGRQDTFSF 
KNLSNFIALE PTPRPRVESL VNGPNITGDV AWLMHLAVVG FAKCGTTAMQ AYFDRHPQIS
MLDGEHCSIR DEGYAASNLV KKLAEELPRG NYIRGAKCPS YLEIPQALHT LSTLFPNARF
VVGVRHPVLW FQLLPALELI GDCEKVGPRY KTGGVCTHQA KFHEPLALLG KTKMSTPEEQ
QYFPKGFSSF VNQTGSSGHE IFLYDISQIA DNNERRQRQF RDDLQRFLHV DEPFSPLSED
KESRRRLSGL ETSTFPNAHK RINICDRKYD GLRDVLLKIG KDASRWIRQY FIHAGGVHVS
SVEFLDQALA RWEIDPCELR LKKALN