Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45614 |
Symbol | |
ID | 7200655 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 719773 |
End bp | 721252 |
Gene Length | 1480 bp |
Protein Length | 386 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179901 |
Protein GI | 219118244 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.164661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACTGCCCTT TGCTTGAATA ACTGATGGAC TTTATTAGTG AAGGGCGATG TCAGCTTAAC AATAAGAACA GAGTATTTTG ATGAACAGGA AACGTCCGTT GCTGTGGGTC TGACATTAGG CAATCAGCAT GCTTCGCCTT CGCACCACTT TCATGTTCAC GATAGCAGGC TCGGTCATGG CGCTGCTGGT GAATCGTGTT CAAGTAGCTC TTATCTTATT CGACGAATCA GATCCTCTGT ATACACGCGA TCCTTCCTTT ACACCGACAG AACCTGACCC CGAGGGAAGA CAAGATACTT TTTCCTTCAA AAATCTTTCA AATTTCATTG CGTTGGAACC AACCCCTCGC CCTCGTGTTG AAAGCCTCGT CAATGGACCC AACATTACCG GTGATGTTGC ATGGCTAATG CATCTAGCTG TGGTTGGGTT TGCCAAATGT GGGACCACTG CCATGCAAGC TTATTTTGAT CGTCATCCTC AAATTTCGAT GTTGGATGGA GAACATTGCT CAATCCGCGA CGAAGGCTAC GCCGCATCCA ATCTAGTCAA GAAGTTGGCG GAAGAACTCC CCCGTGGAAA CTACATTCGC GGCGCCAAAT GTCCCTCTTA TCTAGAAATT CCCCAAGCCT TACACACCTT ATCTACACTA TTTCCAAATG CTCGTTTTGT TGTGGGGGTG CGACACCCTG TTTTGTGGTA CGTGGGACAA GTGCCATGCT TTGTTTTCGG TCAATTGCTG TCTAAATTTA TTCTTTGCCT CACACTCGCG AGAACAGGTT CGAGTCATTT TATAATTGTA TGTACTTTGT GCGGGATATT AACCTGATTT CGTTGTTGTG CAGCTAACAG GTGATTGCTG CCCTTTCAGT TCGCACTAGA CTAGATAGGT TTCAGCTGCT TCCAGCATTG GAGCTTATAG GAGATTGTGA GAAAGTGGGA CCTCGCTACA AGACTGGAGG TGTGTGTACA CATCAAGCCA AGTTTCACGA ACCGCTCGCT CTTCTGGGGA AAACAAAAAT GTCTACACCT GAGGAGCAGC AGTATTTTCC GAAAGGATTC AGCTCTTTTG TTAATCAGAC CGGATCCTCT GGGCACGAAA TATTTCTGTA CGATATCTCT CAAATAGCTG ATAACAATGA AAGACGACAA CGACAGTTTC GCGACGATCT TCAACGATTT CTGCACGTTG ACGAGCCATT TTCTCCTCTT AGTGAAGATA AAGAGAGTCG TCGGAGATTG AGCGGTTTGG AAACGAGCAC TTTCCCGAAC GCTCACAAGC GCATTAACAT ATGCGATCGC AAATACGATG GCTTGCGCGA CGTGCTCTTG AAGATAGGAA AAGATGCGTC AAGATGGATA AGACAGTATT TTATTCATGC AGGAGGAGTG CATGTGAGCT CAGTTGAGTT TCTTGATCAG GCTTTGGCCC GATGGGAAAT AGATCCGTGT GAGCTACGGC TGAAGAAAGC ACTAAACTGA
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Protein sequence | MLRLRTTFMF TIAGSVMALL VNRVQVALIL FDESDPLYTR DPSFTPTEPD PEGRQDTFSF KNLSNFIALE PTPRPRVESL VNGPNITGDV AWLMHLAVVG FAKCGTTAMQ AYFDRHPQIS MLDGEHCSIR DEGYAASNLV KKLAEELPRG NYIRGAKCPS YLEIPQALHT LSTLFPNARF VVGVRHPVLW FQLLPALELI GDCEKVGPRY KTGGVCTHQA KFHEPLALLG KTKMSTPEEQ QYFPKGFSSF VNQTGSSGHE IFLYDISQIA DNNERRQRQF RDDLQRFLHV DEPFSPLSED KESRRRLSGL ETSTFPNAHK RINICDRKYD GLRDVLLKIG KDASRWIRQY FIHAGGVHVS SVEFLDQALA RWEIDPCELR LKKALN
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