Gene PHATRDRAFT_45606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45606 
Symbol 
ID7200647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp674777 
End bp675909 
Gene Length1133 bp 
Protein Length366 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179897 
Protein GI219118236 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0166385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTACTGTCAG AAATCAGAAA AGTGACCCGA CCATGAACAG CTTACTGTTC CCATTGCGGT 
GCTATCGCTT AAACAGTGTT TCTGCCGGAA TCTGGAAAAA GACGACTAGG ATTCACGCTC
CCTATGTTCG TTCGTTTTCA TCCTCGGGTC CTAATCGATT CCATCTTCCT TTCGTTTCCT
CCTCGAAGCG TCAGAGTTCA ACGAAGATTC CTACGTATGT TTGGATGACG GTCGGAGGAT
CCTCGGTACT AGTTGCTTAC TGCTACGTTT CTTTTCTAGA CCGGGCGCCT TTAACGTCAC
GGTTACGATG GATCGCGACT TCACCCGACT GGGAGGAATC CATGGGAGAC CAAGAATATC
GAAAACTGAT ACAGCATTTT CGGTCAGACG TTCTGCCACC ATCTCACCGG GCATCTATTA
CGGTCCATCG GGTAGGACAC CGTATTACCG AGGCGGCTCT GGATTTTGCT AAAACATACA
GCCTACACTC CTACGTTCAA AATTCCCGAC CCTACACCTA TTCAGTTGTG CGGTCGGATA
CGGCCAACGC CTTTGTGCTG CCGGGAAATC ACGTATTCGT CATGACGGGC TTGTTTAAGT
TTGTGAAGAA TGAGGATGAG CTCGCCGCCG TCCTCGGGCA CGAAATGGCG CACAACTTGG
CACGACACGC CGGCGAAAAA GTGTCGGGCT CCATTGTCGT CAATATCCTA GCCCGCATAT
CGCTGCTCAT TGATCCGTCG GGAATTCTGA TGACGTTCTT GTTGCCCGCC GCCACAGTGT
TGCGAGAATT ACCAAACAGT CGACAGCAAG AAACCGAAGC GGATCATATC GGTTTGCATC
TGGCCGCCAG AGCCTGTTAC GATCCGCGTG CCGCTCAACG TGTTTTTGGA GCGATGAAAG
CGGCCGAGAC TTCGGATGTC CAAAGATCTC CCGAATTTTT ATCCACGCAT CCAACACATG
ATCGACGACT GGAAGATTTG GCAACGTTTA TGCCGGAGGC GCTAGCAATA GTGGAGCGAG
ACGCCGATCG TTGCCGGCAC ATACGAGCAG ATATGTCGTT GGCGAGGCAA CGTGCAGTTC
GGGAAGCACA AATAAGCAAC ACACAGTCGT ACAAGAACAA TCGCGAACGG TGA
 
Protein sequence
MNSLLFPLRC YRLNSVSAGI WKKTTRIHAP YVRSFSSSGP NRFHLPFVSS SKRQSSTKIP 
TYVWMTVGGS SVLVAYCYVS FLDRAPLTSR LRWIATSPDW EESMGDQEYR KLIQHFRSDV
LPPSHRASIT VHRVGHRITE AALDFAKTYS LHSYVQNSRP YTYSVVRSDT ANAFVLPGNH
VFVMTGLFKF VKNEDELAAV LGHEMAHNLA RHAGEKVSGS IVVNILARIS LLIDPSGILM
TFLLPAATVL RELPNSRQQE TEADHIGLHL AARACYDPRA AQRVFGAMKA AETSDVQRSP
EFLSTHPTHD RRLEDLATFM PEALAIVERD ADRCRHIRAD MSLARQRAVR EAQISNTQSY
KNNRER