Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45606 |
Symbol | |
ID | 7200647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 674777 |
End bp | 675909 |
Gene Length | 1133 bp |
Protein Length | 366 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179897 |
Protein GI | 219118236 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0166385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTACTGTCAG AAATCAGAAA AGTGACCCGA CCATGAACAG CTTACTGTTC CCATTGCGGT GCTATCGCTT AAACAGTGTT TCTGCCGGAA TCTGGAAAAA GACGACTAGG ATTCACGCTC CCTATGTTCG TTCGTTTTCA TCCTCGGGTC CTAATCGATT CCATCTTCCT TTCGTTTCCT CCTCGAAGCG TCAGAGTTCA ACGAAGATTC CTACGTATGT TTGGATGACG GTCGGAGGAT CCTCGGTACT AGTTGCTTAC TGCTACGTTT CTTTTCTAGA CCGGGCGCCT TTAACGTCAC GGTTACGATG GATCGCGACT TCACCCGACT GGGAGGAATC CATGGGAGAC CAAGAATATC GAAAACTGAT ACAGCATTTT CGGTCAGACG TTCTGCCACC ATCTCACCGG GCATCTATTA CGGTCCATCG GGTAGGACAC CGTATTACCG AGGCGGCTCT GGATTTTGCT AAAACATACA GCCTACACTC CTACGTTCAA AATTCCCGAC CCTACACCTA TTCAGTTGTG CGGTCGGATA CGGCCAACGC CTTTGTGCTG CCGGGAAATC ACGTATTCGT CATGACGGGC TTGTTTAAGT TTGTGAAGAA TGAGGATGAG CTCGCCGCCG TCCTCGGGCA CGAAATGGCG CACAACTTGG CACGACACGC CGGCGAAAAA GTGTCGGGCT CCATTGTCGT CAATATCCTA GCCCGCATAT CGCTGCTCAT TGATCCGTCG GGAATTCTGA TGACGTTCTT GTTGCCCGCC GCCACAGTGT TGCGAGAATT ACCAAACAGT CGACAGCAAG AAACCGAAGC GGATCATATC GGTTTGCATC TGGCCGCCAG AGCCTGTTAC GATCCGCGTG CCGCTCAACG TGTTTTTGGA GCGATGAAAG CGGCCGAGAC TTCGGATGTC CAAAGATCTC CCGAATTTTT ATCCACGCAT CCAACACATG ATCGACGACT GGAAGATTTG GCAACGTTTA TGCCGGAGGC GCTAGCAATA GTGGAGCGAG ACGCCGATCG TTGCCGGCAC ATACGAGCAG ATATGTCGTT GGCGAGGCAA CGTGCAGTTC GGGAAGCACA AATAAGCAAC ACACAGTCGT ACAAGAACAA TCGCGAACGG TGA
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Protein sequence | MNSLLFPLRC YRLNSVSAGI WKKTTRIHAP YVRSFSSSGP NRFHLPFVSS SKRQSSTKIP TYVWMTVGGS SVLVAYCYVS FLDRAPLTSR LRWIATSPDW EESMGDQEYR KLIQHFRSDV LPPSHRASIT VHRVGHRITE AALDFAKTYS LHSYVQNSRP YTYSVVRSDT ANAFVLPGNH VFVMTGLFKF VKNEDELAAV LGHEMAHNLA RHAGEKVSGS IVVNILARIS LLIDPSGILM TFLLPAATVL RELPNSRQQE TEADHIGLHL AARACYDPRA AQRVFGAMKA AETSDVQRSP EFLSTHPTHD RRLEDLATFM PEALAIVERD ADRCRHIRAD MSLARQRAVR EAQISNTQSY KNNRER
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