Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45601 |
Symbol | SybD |
ID | 7200645 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 660667 |
End bp | 661578 |
Gene Length | 912 bp |
Protein Length | 274 aa |
Translation table | |
GC content | 44% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179892 |
Protein GI | 219118226 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGTCT ACGCTATGAT TTGTCGAGCG ATCGACGCAG CAGTGCTAGT GGAGTTCGCT GAAGAACTCC AAGGCAACGC ACCACAAGTA ACGTCTTCGT TGATGGAAAG CTTGCGAGAC CACCCTGAAC TTGTCAATGA AGGCGATCGC AAAACTTATG TGCAACGAAA CGAATCACAA AGTGATATCA TTTCACATTT TTTGGAATCC TGCGCCGTCG CTCTAGGAGA TCAAGGAAAT AGCGTAGAGG AGTTTTATTT TCACTTGTTC AAAATGAATG GTATCTTTTA CTGCTGCATC GGAGACGATC CTGATACTCG AGATCAGAAG GTGTAAGTTG GATGGTAGGG CCCGTACATC TTGTTTTTGC CTCCATCACC TCACCCCCAT TAATTTTATT CGTGCTGTGT AACTTTCAGC AACTTTGCGT TTCTAGAACA CATTTGCAAT GAATTTGTCA CGACATTTCG ATCGAGTCGT ATTGAAAGTG CGAACGCTTA CTCCTTAGAC AAACAGTTTA AACCGACACT GCGCTCCTCC ATGCATCATT ACAATACTAA TCACAAATCG ATTGGCCAAG AGGACAAGGT TCGCTGTGTT TTGGCTCAAG TTGAGGATAT GAAGGCTGTC ATGGGCCGGA ATATTAATTT ACTTTTGAGT CGAGGAGAAG ATTTAAATGC AATGAGCCAG AAGTCGGACA CTATGCAGGA GGATGCTATG GTATTCAAGA AAAACACCAC CACAGCAGCA TGGAAGTTGC AACGACAAGT TTACCTTTAT GGACTCCTCG CCGCATTGGG TATTGTGCTA TTGATTTATA TGATATCGAT TAGTGTTTGC GGGGCACGTC TCAAATACTG TCGTTCCAGC CGGGCAAGTA GGAACAACAG CACTAATACG GGAGGAAATT GA
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Protein sequence | MIVYAMICRA IDAAVLVEFA EELQGNAPQV TSSLMESLRD HPELVNEGDR KTYVQRNESQ SDIISHFLES CAVALGDQGN SVEEFYFHLF KMNGIFYCCI GDDPDTRDQK VNFAFLEHIC NEFVTTFRSS RIESANAYSL DKQFKPTLRS SMHHYNTNHK SIGQEDKVRC VLAQVEDMKA VMGRNINLLL SRGEDLNAMS QKSDTMQEDA MVFKKNTTTA AWKLQRQVYL YGLLAALGIV LLIYMISISV CGARLKYCRS SRASRNNSTN TGGN
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