| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45586 |
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| Symbol | |
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| ID | 7200641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | - |
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| Start bp | 622608 |
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| End bp | 624858 |
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| Gene Length | 2251 bp |
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| Protein Length | 706 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179881 |
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| Protein GI | 219118203 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCCTT CACAAGTAAC ACGAGTCTCT ACAGGAATAC TTGAAGCAGA AGCACATACC
TGCGGGCGAA TGAAGCGCAA GCGGGAAACC CGCGAGGGGA TTCCGGCGGA GCGCAAAAAG
ACTTTGCGGA TGGCACACAC CGCAGCAGAA TGCGTTGTAG TTCCTCCAAT AAGGACCCGT
AGATCTCAAC GCCTATTTTG GAAACGTCGA CGTCGTTCTG TATGGGACGA AACGCGGCGT
AATCTGCTTC TCCTACTGGC CGGTCTGTTG ACTGCAACGC GTGGACAGTT GACCCGCGCT
CCCGTGTCCG TGGCTGTCCC ATCCGTGCCT CCCGCGCCGA CTTTACCGCC GACCTCTTTT
CCTACAGTGA GTCAGGCGCC ATCTGTGTCT GCCGCTCCGA CAGATCTCCC GACCGTGTCA
CCACAGCCGT CGACACTACC TTCGTCGATT CCTTCGCCGC TGCCGACTAT TTCTCCTAGA
CCCACGGTTA GCGAAGCTCC TACGGGAGAA CCGACCGTGA CACCTTCCAA CAGTCCGTCG
TCAGCCCCTT CGATTGCGCG TCAGCTTTTT GTTCGACAAG AATACAAGCA AATCTATATC
ATTCCAACGG AGCGATTTTT TGAACCCGAA GAAATTGCTG CTTTCAACGA AATTTACACA
GGGTACGCTC TTTCATTACC AGCGGCAGCC GAGCGCGTGA ACGCTACCTG CGAAATCGGA
GCGCCGAGTA TCTCCGCTTG CGTTCCGGGG GTTGATGCAT GTGACACCTT CCCGGATGGC
TTTTTGAACG ATTTTCAATT TGCTTGCAAC TGGTCCTCTG ACTTGACGGA GGTTGGCAGG
TTTCCTAGCG AGCTGGAAAC ATTTATCAAC TCTGATCTAG CGATGGTAAC CGATGATCTT
CAGGCGGCGA ACATCATTTT GACCGAAGCC TTGGCGGCTC GGCTGATTCT TACACAGACG
CCGGCTCCAT CTAGTTCTAT GAGGCCGACA GCTTCACCGT CAGCGCGTCC TACGATCAGC
CCCCCTCCGT CACTGCGACC AAGTATCGCC CCCTCGGCTT TTCCAACCGC TGTTGTATCC
ATGGCACCGT CTTCTCTTCC ACCTTTTACT ATGCCACCGT CTCCGCCCCC CTTGCCCGCA
GATAGCAATG GGTTGAGCGT TGGAGCTATT TCGGGAATCG TAGTTGTAAT CGGTCTGGCA
GCTCTAGCCG GCCTCGCTTT CTACTATTTT CGTCGCCGCA AGAAGCGCCG TGAACAACGC
CTACCCGATG CTGCTAATCA ACGGCGTGAA AAGTATCGAC CCGACCCCTT TGATAGTGTC
GCAGCGCTCG CGGATGATCG AACAGATAGC AATTTTGCGC CAATTCTGCA AAGTGAGTCC
GTCGTGTCCA ACAAATCGCT ACTTTCGGTC GGCGAATCGA ATATAGAGGA TGAGTCTGAG
CACGAAACGG ATGGCACCAA GAACCTCCAA GATGAATTCG ATCTATACAA GAACCCAACG
CTTGAAAAAT TGCGGTCTGG CGTGGAAGAT AACGTGTCAG GGTTTGAAGG AATTATGAGT
GCCGCAGTCA CCAACGCTCT CATGGGTGTG GAAGAAGCTC AGGTTGATTC CGCCGAGCTC
ACATGGGGTT GCGGAAGTAA ATATACGGGC GCCGAACTCG AAGCCAGCGC TTTGTGTGAA
GTTGACTATT GGCTTCGACG AAACGAGAAT GCAAGCGTGG AAGGAAAACG CGCTTTTATG
CAAGACATTC TCAACCGTGT GGTGGCCAGC GTCCGTTTCG GAAAATTGGG CGCCGACGAT
GCTTCTAGGA CCATCCACGA ATCGGCGGCC CTCCTAGAGT TGCCGCTCGC AAACAAGCTT
CCTATGGCAA CCGTCATTAT TTCCGGAATG CGGAAAACTG TAACCTCTTT TGACATTACC
AAGGCTCTTC GAGAATTCGG AGAAATCGAT GTCGCTGCGG TGGCCTCTGG ACAGCGGGGG
TTCGGGATTT TGCGATTTCG GCATCTCAAA TCGGTTGATC GCGCCATGAA CCGCTATCGC
AAAGGCGAGA TAGTGGTACA AGATGTAGCG GTACAAATGA AGGCCCTGAT GCCCAGTGGA
GCTTTGGAAA GCCGTGCATA GAAGCAAAAA ACGAGAATTT GTCATGTCAC TACGATGAAA
TAATTTGTAC GATCGGTGTC GACGACTATA CAAAGCATGG CATTCTGTTT ACCTTGAGAT
ACGCATACAG TAGACATCCT GATAGCAAAC T
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| Protein sequence | MDPSQVTRVS TGILEAEAHT CGRMKRKRET REGIPAERKK TLRMAHTAAE CVVVPPIRTR
RSQRLFWKRR RRSVWDETRR NLLLLLAGLL TATRGQLTRA PVSVAVPSVP PAPTLPPTSF
PTVSQAPSVS AAPTDLPTVS PQPSTLPSSI PSPLPTISPR PTVSEAPTGE PTVTPSNSPS
SAPSIARQLF VRQEYKQIYI IPTERFFEPE EIAAFNEIYT GYALSLPAAA ERVNATCEIG
APSISACVPG VDACDTFPDG FLNDFQFACN WSSDLTEVGR FPSELETFIN SDLAMVTDDL
QAANIILTEA LAARLILTQT PAPSSSMRPT ASPSARPTIS PPPSLRPSIA PSAFPTAVVS
MAPSSLPPFT MPPSPPPLPA DSNGLSVGAI SGIVVVIGLA ALAGLAFYYF RRRKKRREQR
LPDAANQRRE KYRPDPFDSV AALADDRTDS NFAPILQSES VVSNKSLLSV GESNIEDESE
HETDGTKNLQ DEFDLYKNPT LEKLRSGVED NVSGFEGIMS AAVTNALMGV EEAQVDSAEL
TWGCGSKYTG AELEASALCE VDYWLRRNEN ASVEGKRAFM QDILNRVVAS VRFGKLGADD
ASRTIHESAA LLELPLANKL PMATVIISGM RKTVTSFDIT KALREFGEID VAAVASGQRG
FGILRFRHLK SVDRAMNRYR KGEIVVQDVA VQMKALMPSG ALESRA
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