Gene PHATRDRAFT_45529 details

Gene Information

• Locus tag: PHATRDRAFT_45529
• ID: 7200725
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: -
• Start bp: 462545
• End bp: 466058
• Gene Length: 3514 bp
• Protein Length: 926 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002179850
• Protein GI: 219118138

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.733997
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTACCACTGA GCAGCACAGT GGCAAGGGAA AGAAAATAGA CATTGTACAT GCTTCGCAAA 
AACTGGTTCA TTGAGTAATT ACAGTGCTTT CTTGTGGACA CGCGCAGTTC CCTTGTCAGA 
TCAGAATCTC TATACAGACT GTAGATAAAA GTGCCCGACC TGGATGATGT ACAGCAAGAG 
AACTGGCGCT ACATGGCTAG TGACACTATT GTTTGGTAGT AATATCGGCA ATCTCGTCTC 
GGCGGAAGTC CCAAATCCCA GCATCCCGCA TGGAATCTAC GGCGGAGCAA CGAGGACGAC 
TCGTACTGCT GCCACAACCT CCAAAGGTGA TGTATCCACG GCGACGTACG AGAGAGCCGC 
AGAAGCGCCA GATCAGCCGA GTGTCTTTGT TGGATCATCT TCTTCAGTCA AACCCAAGAA 
ACACGAAGAT ACTTTGCATG TTTCCAAACG AGATGGGCGC CTGGAACTCT TGGACTCGAC 
CAAGCTGCTG CAACGATTGA CGGATTTGTC TGATGGCTTG GACATGCGCT TTCTGAATTT 
GGTCGCCTTG ACGGAATCTA TTGTGCGAGG CATGTATCCC AACGTGACAA CCCACGAAAT 
TGACGTCTTA GCTGCGGAAA CCGCTGCCAG TCTAGGGACG CAGCATCCGG ACTATGGCCG 
CCTGGCGGCT CGAATTCTCA TTACACAGAA TCACAAAACG ACTCCGACGT GTTTTTCCGA 
GGCCATCGAA ACTTTATACA ACTCCGGTAA AGGCTTTATC GACCATAAAG TTGGGGAACT 
AGTTCGTCGA CGCGGTCCCG AGATTGACTC CCGTATTGTG CACGAGCGTG ATCTTGAAAT 
GACTTACTTT GGCTACAAAA CGTTGGAACG CGCCTATTTG CTCAAAAAGG ACAACGGCAA 
CCAAGTCTTG GAGCGGCCTC AGTATCTCAT GATGCGTGTG GCCTTGGGAA TTCATTGTAC 
AAGTAAGATG AGCTCGCGAT CGGAAGACGA CTGTCTGGAG GCCGCCTTTG AAACGTACGA 
TCTCATGAGC CGGGGCTTTT TTACCCACGC CTCGCCAACA CTCTTTCACG CGGGTACCAC 
CCACCCGCAG CTATCGTCCT GTTTTTTGGT GCAAATGAGT GAAGACTCCA TTAATGGCAT 
CTATGATACA TTAAAGCGCT GCGCTGTGAT ATCCAAAGCC GCCGGCGGTA TCGGGTTGTC 
GGTGCATAAC ATACGCGCCA GAGGAACGCC CATCCAAGGA ACGCGCGGTG TTTCCAACGG 
TCTAGTCCCC ATGCTCCGGG TATTTGATGT GACAAGTCGG TATGTTGATC AGGGCGGCGG 
CAAACGCCCT GGGGCTTTTG CCATTTATCT AGAACCATGG CATGCCGATA TCTTTGATGT 
TCTAAGTTTG AAAAAGAATC ATGGAAAAGA GGAACAGCGA GCAAGAGATT TGTTCTACGG 
TCTATGGATT CCAGATCTTT TCATGAAACG AGTCGAAGAA GATGACGTCT GGAGTCTGAT 
GTGTCCTCAT CAGTGCCCTG GTCTTGCACA TTGTTATGGT GCGAAGTTTG AGGCTCTATA 
TCAGCACTAC GAGCAGGAAG GGAAATTTGT ACGTCAAGTC CGTGCTCGAG AGCTTTGGGG 
TGCCATATTA GAATCTCAGA TCGAAACTGG CACTCCATAC ATGCTATACA AAGACACTTG 
CAACACCAAA AGTAACCAAC AAAATATTGG AACGATTCAA TGCAGTAACT TGTGCACTGA 
GATTATTCAA TACTCGGATC AAGAAGAAAC CGCGGTATGC AACTTGGCAA GTATTTGCTT 
GCCGCGATTT GTTGTTTCCG AGCGCGGTAC TTTCGGATCA ATTAGTCCTG AGTCTGGTTC 
GGCGTTCTTT GATCACGAAG CCCTTCACCG GGCAGCAAAG ATTGTGACGC GCAATTTGAA 
TTCTATAATT GACGTGAACA GCTATCCAGT AGACGGTGCA AAAACGTCAA ACTTTAAACA 
TCGTCCAATC GGAATCGGCG TCTCGGGACT GGCTGATGCA TTTCTCCGAT TGGGCTTACC 
GTTTACGTCT GCGGCAGCAA AAAAGCTTAA TGAAGCTATT TTTGAAACCA TTTATCATGC 
CGCGCTAGAA GCAAGCGCTG AGCTTGCTGA GAAAGAAGGC CCATACGAAA CATTCGCAGG 
AAGCCCAGCA AGTCAAGGAA AGCTTCAGTT TAACCTGTGG GGCCTGTCAG ATGACGAAAC 
GCCAAGTCAC AAGTACGCTT TGGCAAAGGA AACTCCTGTT CCAATTCAGA TGTATCCGAA 
TAGTAGCAAT GTCTGTGGAT ACGATTGGGA ATCATTGCGT CGGCGAATTG TCAAAACTGG 
GCTGCGAAAT TCGTTGTTAG TAGCACCTAT GCCTACTGCC TCTACGTCAC AGATCTTGGG 
CGTCAACGAG TGTTTCGAGC CTTTCAGCTC AAACCTGTAC ATTCGTCGCG TTAAAGCGGG 
AGAGTTCATT ATGGCGAATC CCCATCTTTT GCAAGATTTG ACTGACTGAG GCTTGTGGAC 
ACCATCAGTC CGCAACCAAA TGATGCGCGA TGGCGGTTCC GTGCAAAACA TTCCCGATAT 
CCCCGATCGA TTAAAGGAAC TGTACAAGAC AGTATGGGAG ATCAAAATGA AGGACATCAT 
TGATATGGGA GCAGATCGGG GCAAATTCAT TGACCAAAGT CAGTCGCTGA ATTTGTTCAT 
TGCAGATCCG AACATGGACA AACTTACGGC TATGCATTTT TACGCTTGGA AAAAGGGTTT 
GAAGACTGGA ATGTACTACC TGCGAACAAA ACCGGCTGTA AACGCAATCC AATACACTGT 
TGAAAAGATA AGTCCTACTG TTATTGTGGG CGGCATCCCA GAAGCTGAGC CCGATGACGT 
GTGCATAAGT TGTTCTGCTT AGCTAAATCA TAGCGCTAAG ACCATGTACA GTTTACTCAA 
GTCGTCGCTG CGAAGTACCA ATGAAATATC TTGTTTGGGC TTACTTTGGA GGTCCGTCTG 
CGTACTGAGG CTGAACGTAC TCTCAAGGCG AATGGCTACA AATTGTAAAG AGATGTGTCG 
TTTCAGACCG TTTCACAGTG TAAAACTACA TTCGAATCAC TCGCACAGTT GGGGAATTGT 
TTCAGATTCG AAGCTGCGAT TACCTTAAGA AAAATGTGGA TATTACATGC ACCGACATCT 
TCACTTTATA ACATATCTCG TTTATTTAGT ACTTCTTTAG ATCAACTTCA AACTTTTTGG 
CGGCGGCATC GATGCTCCCC ATTTTATTGA CAGTTTTGAT ACCCTTGGTA CTCAGGCGAA 
GACGGACCTT GCGATTCAAA TCTTCCGAAA AGAATCGCTT CCACTGCAAA TTGACTGCCT 
GTACCTTCTT GATGCGTCTG TGGGAAAACG TGACGACGCG AGCTTGACGA TTGGGCTTCT 
TTCCCAACAA GTCGCAAACC CGCGCTCGCA TTACGAGAGT ACTAGCACAA TTCTGACGGT 
GGATCTGAAA TCGAAAACAA AGAAAGCCAA ATGA 

 

Protein sequence

MASDTIVWYI PHGIYGGATR TTRTAATTSK GDVSTATYER AAEAPDQPSV FVGSSSSVKP 
KKHEDTLHVS KRDGRLELLD STKLLQRLTD LSDGLDMRFL NLVALTESIV RGMYPNVTTH 
EIDVLAAETA ASLGTQHPDY GRLAARILIT QNHKTTPTCF SEAIETLYNS GKGFIDHKVG 
ELVRRRGPEI DSRIVHERDL EMTYFGYKTL ERAYLLKKDN GNQVLERPQY LMMRVALGIH 
CTSKMSSRSE DDCLEAAFET YDLMSRGFFT HASPTLFHAG TTHPQLSSCF LVQMSEDSIN 
GIYDTLKRCA VISKAAGGIG LSVHNIRARG TPIQGTRGVS NGLVPMLRVF DVTSRYVDQG 
GGKRPGAFAI YLEPWHADIF DVLSLKKNHG KEEQRARDLF YGLWIPDLFM KRVEEDDVWS 
LMCPHQCPGL AHCYGAKFEA LYQHYEQEGK FVRQVRAREL WGAILESQIE TGTPYMLYKD 
TCNTKSNQQN IGTIQCSNLC TEIIQYSDQE ETAVCNLASI CLPRFVVSER GTFGSISPES 
GSAFFDHEAL HRAAKIVTRN LNSIIDVNSY PVDGAKTSNF KHRPIGIGVS GLADAFLRLG 
LPFTSAAAKK LNEAIFETIY HAALEASAEL AEKEGPYETF AGSPASQGKL QFNLWGLSDD 
ETPSHKYALA KETPVPIQMY PNSSNVCGYD WESLRRRIVK TGLRNSLSWA STSVSSLSAQ 
TFRNQMMRDG GSVQNIPDIP DRLKELYKTV WEIKMKDIID MGADRGKFID QNPNMDKLTA 
MHFYAWKKGL KTGMYYLRTK PAVNAIQYTV EKISPTVIVG GIPEAEPDDI NFKLFGGGID 
APHFIDSFDT LGTQAKTDLA IQIFRKESLP LQIDCLYLLD ASVGKRDDAS LTIGLLSQQV 
ANPRSHYEST STILTVDLKS KTKKAK