| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45520 |
|---|
| Symbol | |
|---|
| ID | 7200722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011675 |
|---|
| Strand | + |
|---|
| Start bp | 431027 |
|---|
| End bp | 433710 |
|---|
| Gene Length | 2684 bp |
|---|
| Protein Length | 860 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179643 |
|---|
| Protein GI | 219117706 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.995437 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGGTGGCTCA TTCTGGCATC AAACCTTGCC CGTCTCACAA TGAAAATATG GTGTCGCCAT
GCGACGATTC GAAGCGTAGC ATACAGTAGG TTTTACGCAT GTGCTCAGCG CCCGGGATGG
TCTCGACCCT GGCTTTCGGC ATCGCGGACG CCGACACTAC CGATCTCCGG TTTCTCCACC
ACAACTGTAT CAACACCCTA TGCTCAATCA CGGGTTGCTT GGTGGGACGA CTTTTCGAAT
GACGTGAATG GATGGCTTGG AAAACAGGCC GTTGGTACTT GGAGGAGAGG CGACGTTTTG
CGAGGACGAG CGGTGTTGGA CGAGCTGCTG GACCGCGCAA AAGAGCCGAC TCGTGAGCAA
GCAAGACTTG CTACTTCTGT ATTGCAGCGG TGGGTCGCCG AAGCCACACA CGGCGAAAAT
GAGTTGATGA AGGACACTAA AATGATGGGT CAACTACCCC GCGTTCTTAT CATGTGGAAA
CAGGTGAAGA ACCGTCGTCG AATCGTCAAT TTGAGTCGGC GTCGGCTTAA CAAGTCAGCA
GAGGTCGTCG AACCCACGGT TCAGCTACTA CAGATGTTTG CGGAAGCTTA TGACGTCACC
GGAAATGAGG TATTTTCCCC TACAGATCAA TGCTTTGCCA TTACTTTCGA TACGCTAGGG
CTATCCCCCA ATATTGACCA CACATTAGAG GTGGTCCAAG ACTTGTTGAC GCAATGCTGT
CAGCACGCCG AAAAGCGGGG CAGGATTCCG GATCTTGTCT GCTGGAATGC GGCACTTCAT
GCTATTGCCA AATGCAGTCC TTACAATCCA AAAGCACCAG AGCTGGTGGA AGACTTCATT
CAAGGATTGC CGCATTCACC GACAGTCCGA ACTTGGACGG CTGCTTTGTA CGCGTGGGCA
CGCTGTACAC AGGAAGAAGG AGCCCCGTCA CGTGCTCAAA GCATTCTCGA TCACTTAGTC
AATGAAGGGC AAGCAACTAC GGTTGCGTTC AACTTATGCA TTGATGCCTG GAGCAAACAC
GGGCAACCAG CCCATGCCGA AGCTACGTTA CACAGTTTGC TGCAGGAGTA CGAACAAGCG
ACGACACCAA CTGCACGAGA AGCCTTACGA CCCAGCGACT TATCGTTTTT AGCTGCAATC
AACAGTTGGG CAAAAAGCCA AGATCCTCGG GCAGCTGAGA AGGCTGAAGA ACTTCTAAAG
CACATGCAAA GATTACTCAA CTCGGGAGAA CATCCGGGAC TAAAAGTTTC AACGCAAGTA
TTTTCGGCAG TTTTGGATGC GTGGGCTCGC CAACCTAACG CTGGGCCAAA AGTTGAATCT
TTACTGACTG GAATGGAGCA CCTAAACGAG GTGAATCCGG ATGAGGGCAC GGCTTTATCT
CTACAAACGT ACTCCATAGC TATAAATGCG TGGGCAAATA CAAACACTTA CGAGGCACCG
GAACGCGCTG TAAAGCTTTT ACATCGATTG GAGGAACTCA GTTCCCAGGG GAACCCGGCT
TTAATTCCCA ATGCGATGAC GTACACGTCC GCCATTCGAG CATGGAACAA ATCGAATCGT
GACGACGCTC CGTTGCGTGC AGTGAGTATG CTAAATCGCA TGTGGCGGCT CGCCGAGGGA
GCTCGGCCAA AACCATTCCT CCCAATACGG TGACCTACAA CGTTGTGCTC CATATTTTAG
CAAGTCATGG TAAAATTCGA GAAATCCAGG AGTTATTCAA CCAAATGAGG GAGAAAAGTG
ATGACTGGAA TGTTCTGCCA GACGTGGTGA CGTATGGGAC TATAATGAAC GCATATCGCC
AATCGCGACA AAGCAATTCG GGAGTGAAAG CCTCCAGCCT TTTAATGGAA ATGGAAGAAA
AGTATAGGCT TGGCAATGCA GCATTGAAAC CTAATCCCAC TATTTACTCA ACGGTGTTAG
CGGCTTGGGG GAGTAGTGGA CATCGTGAAG CCGCAATCAA GGCCAATGAA ATCTTTTGGC
AGCTTGTGGA ACGGTATGAG AAAGACGAAA ACGATATCGT TCCAACTCAA CAAGTATGTA
ATGCCGCACT TTCGGCATGG GCACGAAGCG ATGAAGCCTT AGCGCCAGAA CAGGCGGAAA
AGGTACTACG ATGGATGAAA GGGCAAAGGT CCAAGCATAT TCATCCTAGC GTAGTTTCCT
ACAATCACGT TTTGATGGCG TGGGCCCATT CTGAACGCAA CCAAGCCTTT TCGCGTATCA
AGGAGCTAAT TGAAGATATG GAATCTTCGT CTGAGACAAT TCCTGACTCG ATTTCGTACA
GTAACCTGCT CTTCGCGATT AGCAAGTCGA ATGGTCCGAG TAGGGCTCGT CAATGCCTTA
CAGTCGTCGA GAATCTCCTC GCCTCAACCA GTGTTCGGTC AATTAACGCA GGAATCACTC
GTCCAAAGAT TGCTTGGTTT CATAGCATCT TTCATGCCTG TCTCACTTCT TCCCTTTCGG
AACGAGATGA TTCTTTGCTA GTGCTGAAAG AGGCATCCCG CATTCTTTTT GAAACGAAGA
CGTTGCAAAT TACGGAGGGA ACTTTTCGTT ACATTCTCAA AGCATGTCTT CATCTATCCG
TCGACGATGC CGAATTTGTA CAAAGCATAA CGGGACGATG TCTCGCACTC GGTACTCCGA
ATGCAGACAC TACGGATACA ATACGCAGAG TCTTATCTGA CTAG
|
|---|
| Protein sequence | MKIWCRHATI RSVAYSRFYA CAQRPGWSRP WLSASRTPTL PISGFSTTTV STPYAQSRVA
WWDDFSNDVN GWLGKQAVGT WRRGDVLRGR AVLDELLDRA KEPTREQARL ATSVLQRWVA
EATHGENELM KDTKMMGQLP RVLIMWKQVK NRRRIVNLSR RRLNKSAEVV EPTVQLLQMF
AEAYDVTGNE VFSPTDQCFA ITFDTLGLSP NIDHTLEVVQ DLLTQCCQHA EKRGRIPDLV
CWNAALHAIA KCSPYNPKAP ELVEDFIQGL PHSPTVRTWT AALYAWARCT QEEGAPSRAQ
SILDHLVNEG QATTVAFNLC IDAWSKHGQP AHAEATLHSL LQEYEQATTP TAREALRPSD
LSFLAAINSW AKSQDPRAAE KAEELLKHMQ RLLNSGEHPG LKVSTQVFSA VLDAWARQPN
AGPKVESLLT GMEHLNEVNP DEGTALSLQT YSIAINAWAN TNTYEAPERA VKLLHRLEEL
SSQGNPALIP NAMTEYAKSH VAARRGSSAK TIPPNTVTYN VVLHILASHG KIREIQELFN
QMREKSDDWN VLPDVVTYGT IMNAYRQSRQ SNSGVKASSL LMEMEEKYRL GNAALKPNPT
IYSTVLAAWG SSGHREAAIK ANEIFWQLVE RYEKDENDIV PTQQVCNAAL SAWARSDEAL
APEQAEKVLR WMKGQRSKHI HPSVVSYNHV LMAWAHSERN QAFSRIKELI EDMESSSETI
PDSISYSNLL FAISKSNGPS RARQCLTVVE NLLASTSVRS INAGITRPKI AWFHSIFHAC
LTSSLSERDD SLLVLKEASR ILFETKTLQI TEGTFRYILK ACLHLSVDDA EFVQSITGRC
LALGTPNADT TDTIRRVLSD
|
|---|
| |