Gene PHATRDRAFT_45485 details

Gene Information

• Locus tag: PHATRDRAFT_45485
• Symbol: ETR1
• ID: 7200707
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 322693
• End bp: 327856
• Gene Length: 5164 bp
• Protein Length: 833 aa
• GC content: 47%
• Product: ethylene receptor 1
• Protein accession: XP_002179622
• Protein GI: 219117662

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.454805
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGACAGCCCG CTGAGCACTT TTTAGAATGT GGAATGACCA AACTCGAGTT TACGTTAAAT 
GCATCTACGT GCGAAGTGAT TTCGTGTGAT GCTACCACAG CCTCGATTCT CGACATATCG 
CCTCCGTTCG TACCCTTGGC TCGCGTCCTT GCGTGTACCA ATGAATGCGC CAAGTTTCGG 
GAGGGGGTGG CTAGAGCTAA AAAAGAAAGC CTGAAGTTCT TCACGTTAAA TGTTGTTTTC 
TTGGCCTCGA TGGCGACTAC AGAGGCTTTT CATGCTGATC GCTCTCCCAT CGAAGGTATT 
TTTGCGTCTC CTGAGGGTCT CTTCCATTCA TGTGGAGTTG ATCAGATTGC ATGCTTTACC 
CATGTTACAC TCGAAGACGA CCAGATTCTC GTTACAGCAT TGGAATATGA TAGACAGCAC 
CGAGCAGATC TCCTTCGCCA AGAATTTGGT TTTTGGCTGC TGAAGCATCA AGTCGAGAAA 
GCAGTTATCG CGACAACCCT AGGGGGGGGG GACATTTGCT ACTGGAATCG ATTTGCTAGC 
GAATTATACG GCTATGAAAG GGATGAAGCG ATCGGTTTCA ACATTGGGCC TTCTTTTGCC 
AAACAACATG TCGCTCAAGC AGTCAGAAGA TTTTCAAGCG CGGCTAGCGG AGGGGAACCA 
CTGGAAGGGA ACCTTTCAGG TACGACGGAA GGATGGCTCA CAGTTTCTGG CCGATGCGCA 
CTATACACCG GTCCTCGATA CAGAAGAGAA GGTGAAGTAT ATTGTAGGAG TCACAGCCGA 
CTATTCCCAG CTCTACAACA CTCTTGCGGA ACTCGAAACT CTCAACAGCA GCTTGGAAAA 
GGAAGTGGAG CGTAGAACAA ATCAGATTGT CGAGCAGGAA CGATACCTGC ATATGATTGG 
TGCGGCGATT CAGCACTCTG ATACAGGGGC AATATTTACG GACAAAAGCG GTCGGATTAT 
TTGGGTCAAT GAACCTGTGC TCAAAATATT CGGCACAGCT GGGCGTTCCT TTCTAAGTAA 
GTTTGCGTGG GAGCTACCAT TGGAGTTTGA AGGTGATTCA ACGGGTAGTG CGGAAGAATC 
CTTTTCAGAA TTGTTTCGAC AGGCTAACAC CGGTACTACA CCGAGAGCTC GTCTCAGGCT 
TTGTCATACC TTGGAACAGT CGAAGGACAT TGAAGTGCTG TCGATGAGCG TACGCAACTT 
TTCCAGGCAC GGATCGTCGC TATCAGAAGA CCAATACTTC ATTACCCTTA GTGATTACAC 
TAGCAAGCAG CGAGCCGAGA AAGCTCGAGT GGCAGCAAAA ATTGCAGAAA CAGCAAGTCA 
AACCAAGACG GAAATGATGC AAATGTTGTC ACATGAATTG CGGACGCCAC TCCAGGGCAT 
TATGGGCGTT GCTTCCACTA TCATAGAAGA TCTGTCCAGT GATTCCAGTA TGTTGGACAG 
TCTAAGGACC ATTCTTGCAT CTTCACGGTT GCTACTAACG TTGATTAACA ATGTCTTAGA 
TATCGGCAAG ATTGATGCCA ATATGATGGA TATGATCGAG CTCTCGGATA TTCCCTTGTC 
AGCTTGTATA GCAGACTCTC TTGAATTCTG CGGTCCATTC GCGGCAATTC ATGACGTGTC 
ATTGGTGTTC CAAAAGGAAG CAGAGCAGTT TGTATCCGCA AACCGACTGC GCTTGGAGGA 
AATTCTGGTA AATCTTGTTG GAAATGCCAT CAAATACACT ATGACAAATA CCAAGGTCAC 
AATCTCCTTG AGGAAATGCT CCATTGAGGA CGCTTGGAAG GAAGCACGGT GCGCAGCAGC 
TTCAGACTTG ATGTTTTTCT CGGAAGAGAA GTTGTTGGAA GCAGAGACTA GCCTAAGAGG 
GAGCAATATT GAGGTTACTG TAATTTCTGT TCGAGATCAA GGAACTGGCA TTCCAGCTTC 
TAGCTGGAAA AAGGTTTTTA GTCAGTTCGT TCAACTCGAA AACTCGAAGG AGAAAGACCG 
TAGATATGAA GGCGGTTCGT CTGCAAAAGC GGGGCAATCA AGTGGTTCCG GCCTCGGCCT 
CAACCTCGCC ATGAAGTTTG TCACTCGAAT GAATGGACAT ATATGGTTTG AGAACAGGAG 
TCCAGGTGCC GATTTTAGCT TCTTTCTTGC GAACTCTAAG CGACGGCGTT CAATTGAATC 
CGCTAAGCCC CAGCAACCAC CAATGCCCCC TGTGATACAG CCTCAGCAAG CTGCGTCGTT 
TCGGACGCTG ATCGTTGATG ACTCAACAAT CAATCTGAAA GTGATGAAAC AAATGCTGAG 
CCGGCTCGGA GTCCAACAAA TTCTTGTTGC TCATAGCGGC AAAGAAGCAC TTCAATATAT 
AAAAGAAAGC AGTAAAATGC ATGTTCCAAA TTTAATACTG ACAGATTTGC AGATGCCGGG 
CATGACCGGG TACGAACTGC TAAAGCAGTT ACGCGAGCTC AAACATTTCC CGCAAGCAAA 
AATTATGGCG TGCTCAGCAG ACTGGTCATC CGAAACCGAA GCAAAATGTG TTCACGTGGG 
CTTCGAAGGT CTAATTCGGA AACCCATAAC TCTTACTTGT TTGAAAGAGA TCTTGTCAGG 
AATTATTTCG GAAAATGAAA AATACTTGAA GCAATCGCTA GCTACGCTAC ACTAGTGCTT 
TGCTACCACT TCGACAAACT GTAATTTTCT TTTCAAAGCA CTCTAGTCAA TAGGATCGCA 
GAAAGTATCA AGAATATAAC AGTCCGATAA TCAGCAAGAA AGCGAAGATT GATACGAAAG 
TACTTCAGCG TCGGTCTTTC CAATCCAAGT TTGCGGTTAG CCCAGTTGGA TAACCGGATT 
GTGCCATCAA CAAGTAGATC GAGTTCGTGC GACATCACCC GAGAACACAT CGTGTCTCCA 
ATATATTCTA CGTCGTCTGG TCGAAGCTTG AGCAGTCCAG TCATCAATTG CTTGTAACCT 
TGTTCTGACA ATAATCCATC GCCTGTGCGG TCCACGAATT GCTTTTTCGG GAAAGAATTT 
CCCCCGTCGG TCTTTTTGTG CTTACAATTA GTCTCCAGCG TCAAAATTTC TTTGTTTTGT 
GGCCAATGAA CGATCAATGT ACCTCGTTCA ATTAGCCATT TAAAAGACTT CTCTTCACCG 
GACATTGCGC CGCCACCAAA CATACCTTCG ATGTACGCGG TAATTCGATC TGTAAAATCT 
AACTCACGAA CTTTTTTCGT GTGCTGCATT TGAATTTCTT CCAAGAGAGC AATCATGTCA 
TTCTGACAAG ACGATAGCGT CATACTTCCG CTAGGTGGGG CGTACGGCTC CAAGTGTTGA 
GCCTCCTGCT GTACCAAATA GGAATATTCA GAGGTGCCTT TCAAATGACG AGATATGACA 
TCAACAACCT CGGCCGTAAA CACGCGAAAG ACCCGTTTGA CTAGCTGAAT CGAGTGATCA 
AAGTTGCGTT CCGAAAAGTC CAGTTCGCGA GCGCGACAGA GAAAAATAGC CAATGGAACG 
GTGTACAAAT GAAGATTTGC GGCAATGTAT GGTTCCCAAA ACGGTTCGTA TCGACTGGAC 
TGGTTGTGCT TTGGGATAGT TATGGTGCGG GGCGATGCCA CAACGCCAAC CGAGCCCATG 
ATACGGTGGC TTGTACTCGT TTGCGTGAAC TCCCGTGTTT TACCTAACAA AGCGATTGAG 
AAACAAATTT TAGAAACAAA TAAAAACAGT AATTGCATCA TAGAAAGTAA GAGATGACAG 
GCTCACTTTC GTTGACGTTC CACGGCTCCA ACCAAATGAG CCACGCATTT ATTGCGGCAA 
AGAATGGCGA CTCGATTGAG TGCATCGATG CATAACGGAA GGTGGCTCGA AGGTGATTGT 
AAAACGGTTG CTTGAAAACG GTAGTGGCTG TGCTCAAACA CCATTTGCGT TGTGAAGATG 
ACGCTTGTCG ACGAACCACT TCTGGCAAAC TTGGATCCAA CATGAGGTGG ACCACAACGT 
TACGCAGGCA ACGCTGTGTC AGCGATGATG AGGACGTATA AGTTCCTTGG GCCAAATCGT 
ACGAATCGTG CAGATTGTAC TTGGCCAATT CTACGATGCC AGCCAGCTTT CGGCGTTCCT 
TCAACTTCTG TATAAGCTGT ACTGTCGTCA TAAGTCGAAT GTCTGCTTCC AACCACATCA 
AAATAACAAC ACGCAGGAAA AGTTCCGACT CGTGCATCGA GCTTCCGAAA TCTAAATGGC 
GATCACCTTC ACGCTCGTAA GGTAGAAAAT ATTTTACATA CCGACGGAAA AGATTGTTGT 
ACACGGTCTC CCCGTATGTT TCACGATTCT GTCTAGCGTG GATCAAAGAT CGAGCAGCAG 
AATTGTTTGC TCCACCGGGG GTTGGAGCGT TCAACTTCGG GATAGATGGA AAGAGAGGGT 
ACCGAACAAA GACAAACAAG AAATACTCCA GCATGCCAAG TAAAACATTG GGAGGCGTTG 
CTTCTTCCGC TTCTGTCGTT TCTCCAATGC TCTTTCCAAG CGAAGCAGTG TCTGGTGAAA 
ATTGATACGG TGACGAGGGA GTCGAGAAGG CTCGAGGACT GGTCGTCGAC ATCGGGCCAT 
GGCGCCCGAG AGGACTCAGT TGTAGAGGCC CACGAACCGA AGAATTTGGA CCTGTTAACA 
CAGCTTTTTT TAGTTCTTGG CGTTGCTTGT AGTGCCATAA TTCTCTTTGC TCGTTTGGCG 
GTTTTTGAAG CAGCTCTTTC AGGAGACGAG CGTCATTTCT GCTACACGCA GCAGGAGTAA 
ACGGGCGAGA CTGTACCGAT CCCATAAAAA TATTTAAGGC TTGAGGCTGC TGGTCCAGCA 
TAGCCATCCA GGCATCTTGA GTCGCCTTAG GAAGAGCGTG TAGTGGGAAA GAGAAACCAA 
TGTCTGGGCG ATTCCTTGAT TCTTTGGAAA TGGCTTCGAT TAACGTCATT GGAAGCGGAG 
AAGCATCTTT GACGCTCGAA TCCGGCTTTG GAGCCGTGCC GAGTAGTTTG ACAACGGGAT 
CGGTTTCGAT ACTCGAGGTC CCCTTCCGTG AAAGGGTAGC AGCGCTCGCT AGGGATGCAA 
CCCCCCGATG GTGGCTACTT CCCGACGCTG GTGAGCGACC GCTCCCATTA GTGTTGGTAG 
ACTGGCTCCA AGCGTTTTGA ACGGAAAGCC AACCACCTTC CTTGTGCCGA TATCCCTCCT 
TTTC 

 

Protein sequence

MTKLEFTLNA STCEVISCDA TTASILDISP PFVPLARVLA CTNECAKFRE GVARAKKESL 
KFFTLNVVFL ASMATTEAFH ADRSPIEGIF ASPEGLFHSC GVDQIACFTH VTLEDDQILV 
TALEYDRQHR ADLLRQEFGF WLLKHQVEKA VIATTLGGGD ICYWNRFASE LYGYERDEAI 
GFNIGPSFAK QHVAQAVRRF SSAASGGEPL EGNLSEEKVK YIVGVTADYS QLYNTLAELE 
TLNSSLEKEV ERRTNQIVEQ ERYLHMIGAA IQHSDTGAIF TDKSGRIIWV NEPVLKIFGT 
AGRSFLSDST GSAEESFSEL FRQANTGTTP RARLRLCHTL EQSKDIEVLS MSVRNFSRHG 
SSLSEDQYFI TLSDYTSKQR AEKARVAAKI AETASQTKTE MMQMLSHELR TPLQGIMGVA 
STIIEDLSSD SSMLDSLRTI LASSRLLLTL INNVLDIGKI DANMMDMIEL SDIPLSACIA 
DSLEFCGPFA AIHDVSLVFQ KEAEQFVSAN RLRLEEILVN LVGNAIKYTM TNTKVTISLR 
KCSIEDAWKE ARCAAASDLM FFSEEKLLEA ETSLRGSNIE VTVISVRDQG TGIPASSWKK 
VFSQFVQLEN SKEKDRRYEG GSSAKAGQSS GSGLGLNLAM KFVTRMNGHI WFENRSPGAD 
FSFFLANSKR RRSIESAKPQ QPPMPPVIQP QQAASFRTLI VDDSTINLKV MKQMLSRLGV 
QQILVAHSGK EALQYIKESS KMHVPNLILT DLQMPGMTGY ELLKQLRELK HFPQAKIMAC 
SADWSSETEA KCVHVGFEGL IRKPITLTCL KEILSGIISE NEKYLKQSLA TLH