| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45482 |
|---|
| Symbol | |
|---|
| ID | 7200705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011675 |
|---|
| Strand | + |
|---|
| Start bp | 315898 |
|---|
| End bp | 316986 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179620 |
|---|
| Protein GI | 219117658 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAC ATAGAGTCCT TTATTCAATT TTAACACGGG CTCTGGTGTG GCTCCCTTTT
CGGTCCAACC AAGTAAGCAG AGAAACCGTC GCGTCCGTAG TGACTTTCTG CTCAGATACC
AACGCTGATT GGGACGAGGG CGCTCTGTCT CGATGTAATC ATCAAAACAT CTGTGTAGTG
AATGGCGACT TCCCCGGTCC AACGGAGGAT CTTGTATCCA TTTTGCGGTT GCCTTTGGTC
CGGCGAGACG AACTTTGCAA CGTCGAAACT GAATCCACAT TTTCCCAGGC ACTCTCAATT
GTCTCGTACC AAAATACTGC TTTCGGAATC AACGACTACG CCATTGCTAT CCAATCTCTT
CAACACGAAT TCGAATGTAC GAGGAGTAAG AAATCGAGGA ATAATGTGAA GACCAAAACA
AAACCTTTCT ACGTGGATTT TTGTCCACCT TTGTCCAGCT CCTTGCGAAG GCGGATTAGC
GGTGAAGTGG GTTCAGACTT GCTTCAGAAA GCGATCTCTC CACGAAAGGG ATTTCCAAAC
GGTGCCATAA TTTATGATTT GACAGCTGGT TTTGGTCAAG ACGCATTACT TATGGCTACT
GCTGGAGCAA GACGAGTTTA CATGGTTGAG CGTGATCCGA TTGTTGCTGT TATGTTGCAA
GACGCTCTAA GACGCCTTTC CAACTTAGCC GATGCGGGAG ACAACTTTGC GATGGATTTG
TCTCCCCGTC TTTCATTTCA AGCAGGCGAT GGACGAGAGG TAGTTCGAAA GCTGCTTGCA
GAAAAAGACG CTAGTGTACT ACCTGATATT GTTTACCTCG ATCCGATGTT TCCGGCCAGA
AAGAAGCAAG CTTCTGTCAA GAAGAACATG CAAATCTTGC ATAGCCTTTT AGAAACACAG
ACTGGAGATA GTATTCTGCG GCAGCGCGAC GAACTGGAAC TTCTGCATAC TGCTTTGGAA
GCTGCCGGAA CAAAGGTCGT TGTCAAGCGC CCTGTTCATG CCTCTCCATT GGGAGGCGCA
TCAGTCGAGC AGAAGCCTTC TTACGACATA AGGGCTCCAG TAAATAGATG GGATGTGTAC
TTAAAATAA
|
|---|
| Protein sequence | MKIHRVLYSI LTRALVWLPF RSNQVSRETV ASVVTFCSDT NADWDEGALS RCNHQNICVV
NGDFPGPTED LVSILRLPLV RRDELCNVET ESTFSQALSI VSYQNTAFGI NDYAIAIQSL
QHEFECTRSK KSRNNVKTKT KPFYVDFCPP LSSSLRRRIS GEVGSDLLQK AISPRKGFPN
GAIIYDLTAG FGQDALLMAT AGARRVYMVE RDPIVAVMLQ DALRRLSNLA DAGDNFAMDL
SPRLSFQAGD GREVVRKLLA EKDASVLPDI VYLDPMFPAR KKQASVKKNM QILHSLLETQ
TGDSILRQRD ELELLHTALE AAGTKVVVKR PVHASPLGGA SVEQKPSYDI RAPVNRWDVY
LK
|
|---|
| |