Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45472 |
Symbol | |
ID | 7200700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 292378 |
End bp | 293177 |
Gene Length | 800 bp |
Protein Length | 230 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179614 |
Protein GI | 219117646 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.369869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCGAGTCGAA AATCCGCCAG TCGTGCTGTA TTTTGTGTAA AGGTCCAGAA GAGAATTCTG TTGCGTCTGC GCACTCCGTT CGACTTCCTC AACATGGGGT CCGTTTGTCA GTGTCTGTTT CACTTCTGCT GTGGAGACGC CGACGAAGAA GGGACACACC AGAGTCATCA GCAGCACCGA CCTATTGAAG TTGACCTTTC GCTACCAGCA CACATGACTC GAACTTTGAC CGACTCTAAC TCTCAGGAAG ATGTTTCCAG AGTACTTGAG GATACGAATT CTCGAGGCAA CGATGATGTT TCGTGCAGCG CTGCCAACAC CGTGCAACCA CACGAAGTTA GCCTACATCA ATTCTTCCGT TCTTTATCGG ATCGCTTCCG TGTACGCTCA TACGATGCCA TTCGCTCTCG GTCGGATACG GATGAAAGAC GCGACGGTGT ATTCCGCGAA CGTCGACAGC CCGTGATTCG AAAGTCCCCC CTTCGAATGG CGTCCAGCTT TGATTCTTCG AAAGGCACTC CCACCATTCG TCTGGACGAA ATTGTCTTGC CTGGATCCGC GTTGCAAATA GCCATGGCCA AGGAAATGGC GCAAAACCTA GATTCACACG AAGACGAATG TGTGATTTGT ATGGAGGGCT TCGACGCGAC CAATCCGCGC ATGCCGACCT TATGTGGCTG TGGGCCCAAC AATACGTACT TCCACTTGCC CTGTTTGTAT CAGTGGATTG AACAATCGCA CGAATGCCCA AGTTGTCGTC AGAAGTTGTC GTGGGAGGAG TTCTAAAGTG ATGAATATTT
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Protein sequence | MGSVCQCLFH FCCGDADEEG THQSHQQHRP IEVDLSLPAH MTRTLTDSNS QEDVSRVLED TNSRGNDDVS CSAANTVQPH EVSLHQFFRS LSDRFRVRSY DAIRSRSDTD ERRDGVFRER RQPVIRKSPL RMASSFDSSK GTPTIRLDEI VLPGSALQIA MAKEMAQNLD SHEDECVICM EGFDATNPRM PTLCGCGPNN TYFHLPCLYQ WIEQSHECPS CRQKLSWEEF
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