Gene PHATRDRAFT_45472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45472 
Symbol 
ID7200700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp292378 
End bp293177 
Gene Length800 bp 
Protein Length230 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179614 
Protein GI219117646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.369869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCGAGTCGAA AATCCGCCAG TCGTGCTGTA TTTTGTGTAA AGGTCCAGAA GAGAATTCTG 
TTGCGTCTGC GCACTCCGTT CGACTTCCTC AACATGGGGT CCGTTTGTCA GTGTCTGTTT
CACTTCTGCT GTGGAGACGC CGACGAAGAA GGGACACACC AGAGTCATCA GCAGCACCGA
CCTATTGAAG TTGACCTTTC GCTACCAGCA CACATGACTC GAACTTTGAC CGACTCTAAC
TCTCAGGAAG ATGTTTCCAG AGTACTTGAG GATACGAATT CTCGAGGCAA CGATGATGTT
TCGTGCAGCG CTGCCAACAC CGTGCAACCA CACGAAGTTA GCCTACATCA ATTCTTCCGT
TCTTTATCGG ATCGCTTCCG TGTACGCTCA TACGATGCCA TTCGCTCTCG GTCGGATACG
GATGAAAGAC GCGACGGTGT ATTCCGCGAA CGTCGACAGC CCGTGATTCG AAAGTCCCCC
CTTCGAATGG CGTCCAGCTT TGATTCTTCG AAAGGCACTC CCACCATTCG TCTGGACGAA
ATTGTCTTGC CTGGATCCGC GTTGCAAATA GCCATGGCCA AGGAAATGGC GCAAAACCTA
GATTCACACG AAGACGAATG TGTGATTTGT ATGGAGGGCT TCGACGCGAC CAATCCGCGC
ATGCCGACCT TATGTGGCTG TGGGCCCAAC AATACGTACT TCCACTTGCC CTGTTTGTAT
CAGTGGATTG AACAATCGCA CGAATGCCCA AGTTGTCGTC AGAAGTTGTC GTGGGAGGAG
TTCTAAAGTG ATGAATATTT
 
Protein sequence
MGSVCQCLFH FCCGDADEEG THQSHQQHRP IEVDLSLPAH MTRTLTDSNS QEDVSRVLED 
TNSRGNDDVS CSAANTVQPH EVSLHQFFRS LSDRFRVRSY DAIRSRSDTD ERRDGVFRER
RQPVIRKSPL RMASSFDSSK GTPTIRLDEI VLPGSALQIA MAKEMAQNLD SHEDECVICM
EGFDATNPRM PTLCGCGPNN TYFHLPCLYQ WIEQSHECPS CRQKLSWEEF