Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45465 |
Symbol | |
ID | 7200568 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 246045 |
End bp | 247281 |
Gene Length | 1237 bp |
Protein Length | 350 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179817 |
Protein GI | 219118069 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000817254 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCT ACGGCAAACT TCTGGTGGCA TGTGTCCTCC AAACTAATGT TTGGGGGACC GCTGCTTTCG TTACCCAAAA GTCGAAGGGG TTTGCTTTCA GAGGAACAGA TGGGTTATCG CCAACTGTGT CATACTTGGA TAGCAACGGG AAAGGATCGT ACATGGCTTC ATCCAAATTG GCGTCCTCCG AAGGGTCGAC ACAAGGCGAA GGTGTTATGG ACAACAGTCA ATCTAGGGGA CCCTCTAGTA GTAGCCCAGC GGTATGTCCT CTTACGAACA TGGTCCAATA TAATGTCCTA GTCATGTATT CTCAAATGTC GTCCCTCCCA ACTTTAAAAA CAGAGCGTAT TGGACGCACG TCTTACTGCC CTAGAACAAC AGCAAAACCG TGGGGCACAA GGCGGTGGAC GTCCCCAAAA CCAACCGAGG AAGCTTTGGG ATAGCAGATC GGCAGTAATA GTTCAAGGAG GATCTTTGAA GACATGGTCT TTCCCTAACC CCTCGGTTGA GAGAGTCCAG GTTGTGATGA ACACAGAAGG TCGTCCGCTG GATGCCGACA TCGAATTGTG GCAGGGACCT GATAACACTC CATTCAAAAT GCGAGTGTAC GTTGAGGACG GTAGCTTGCG CCCATTTCGC GCAGTGATTG AAACTCCGCG CGGACCCAAT ACGATCGCGA TTCGCAACAC GGGTCACCTC GAGTTCCCTT TGTCTTCCTA CGTAATGGCT GGCTCTGCGG ACAATGGTTT TGTTGCCAGT TCAATCGACG AAAGTACCCC AAGAATAATC CAGGGTGGAG CCTTGCGCAC ATACCCGTTC AACCCGTCTG TCGAAAGCGT GCAAGTTGCT TTGCGAACGG ACGGACGTCC ATTGAACGCA AGAATTGAGC TGTTGCAGGG GCCCAACAAC AACAAGCAGG TTATTGAGCT TTACACCGAA GACGGAATGG ATCGTCCTTT TTTCGCCGTC ATTGAGACAC CCGGAAGCGG AAATGTTGTG CGAGTTGTCA ACACAGCAAC CGTCGAATTC CCCATGACCG CCTTGGTTGA GGCTTACCAG GTCGGAAACA GCAGATCCAA CGCAAACACT GTGATCGGAG GCGAAGGAGG CGGGTTCATG GACCGTTCAT GGTAGGGAAG GGGTTTAATG TTTCTAGTGA CTGTGAATTA AGTGCCACCT TTTTTGTTCG TGTGCGTCTA AATTATGACA TAATAAAATC CAAACCTTTA CATAATG
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Protein sequence | MNIYGKLLVA CVLQTNVWGT AAFVTQKSKG FAFRGTDGLS PTVSYLDSNG KGSYMASSKL ASSEGSTQGE GVMDNSQSRG PSSSSPASVL DARLTALEQQ QNRGAQGGGR PQNQPRKLWD SRSAVIVQGG SLKTWSFPNP SVERVQVVMN TEGRPLDADI ELWQGPDNTP FKMRVYVEDG SLRPFRAVIE TPRGPNTIAI RNTGHLEFPL SSYVMAGSAD NGFVASSIDE STPRIIQGGA LRTYPFNPSV ESVQVALRTD GRPLNARIEL LQGPNNNKQV IELYTEDGMD RPFFAVIETP GSGNVVRVVN TATVEFPMTA LVEAYQVGNS RSNANTVIGG EGGGFMDRSW
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