Gene PHATRDRAFT_45463 details

Gene Information

• Locus tag: PHATRDRAFT_45463
• ID: 7200566
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: -
• Start bp: 235521
• End bp: 241342
• Gene Length: 5822 bp
• Protein Length: 1307 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002179816
• Protein GI: 219118067

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.857955
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCAATA GTATCCACCT TGCCTCTAGG GAAGACGCAA GAGGAGACCA GGATGAGAGA 
CACTATTTCG ATGGACCTCT ATTGGATATT GAGGATGATG AATACGATGT AGAGGATGAG 
CCCCTCGCTG AAGTCGATAA TCCTACCACG GATGCTGGTC CTAAGCCATC CTACATGGAG 
CCTTCCTACG AAAGGGCCAG CGCCGTTTCG TTTTCGCGTC TGTCTCAACA AATGGAGTAT 
CTTTATCGAC TCAAAACACA AAATGTAGTC CATCCACCAG ACAAGGTCTC AAAACTAAAA 
CGACTTTTAC CGCCGGCCTT AATTTCAAAA ATCTCACGCC CCACCAAGAC CAGCGATCCG 
CCACAATCTC TGTTCCCCAT TCTTCGTCTG CTATTACCCG AACGAGATGG TTCACGCCGA 
ATTTTCACCA AAGAAAACAC ATTGGCAAAG GCTTACGGTC GAGCTTTTGG ATTACCTCCA 
GCTAGTACCG ACTACCAGAA ATTGTTGTAT TACTCCGATC CACATATCGT TGGATCCAAG 
TCCACTGGAA CAGGGGACTT CTCTGAAGTT TTGCGGCAAG TTTTGGAAAA ACGTATATCA 
CTTCAGAAAA ATGGATCAGG TGTCACGGTG GGACAGGTGA ATGCACTCCT GGATGAGCTG 
GCGGTAATTG GGAAGCCGCC AACGAGATCT AATCATGACT GGAGAAACCG CGAAGCTGAG 
CTGAACGACT TCCAATTGAA ACCCAAGAAT TCGGCGTCCA AAGCAGAACT CCAAGCAAAC 
TGGGTCACTA AGCTGCATTG TCTCGGCTTA ACTCCATTAG AGCACAAATG GATTATTCGT 
ATCATCTTGG AGAGGCTACA GATTACGTTG GGCTCGACGG TCATTCTTGC ATGGTACCAT 
CCGCTGGCCC CGTCGTTTTG GAGCGCACAC AACAGTTTAA AAGCCGTCTG CAACAAGCTT 
TGTCAACCTG GCGTCTTTGA GTTGCGTCAC AACCTCGCTG AAGATGGCGG AGACGACGAT 
GAAGCACCGT CAACTTTGGC GCCTTATTTC AAAAGCACTC ATTTGACACA CGTGCAACTA 
GGTAATCCTT TTTCGCCAAT GGCTTCCGAA CGAACCGGAT TTCATACTGT GTTGTCAGAT 
ATGTCATCTC GGCATAGAGA TTTTACTGGT GAAGAAAGGT GCTACAGGTA TGAGGCAGTG 
ATCAGGAGCT TGGCGTTTAA ATTTCCTACG TTTGCAATCG AAACAAAACT AGATGGTGAG 
CGCCTGCTCG TGCATTATTT CCGAAATGGG ACCGTTAAGC TTCATACTCG GCAAGGCAAC 
TGGTACAGGT ACGCAAACCA CACCCATTGA ATTGACAAAC AACCAAATCT ATTGACAAAC 
TGATTGCACT CCCCACAGTG AATTGTATTC GCCGGTACTT GGGCCAGCTC TCCGTCGAGC 
AGTGGGAAAG CACGATTTGG ATCTCATTTT AGATGGCGAA GTGTTAGCAT GGGACAACGA 
GCGCCACGAA ACTGTTCCTT TTGGCAACAA CAGAACAATT GCGAAGATGC GGTACAGTTG 
GATGCGAAAG GCTGGAATAC TGGATGAGCG CGATATCAAT CTGCACAACG GCGAGAACGA 
CGTCAAGCGG ATAAACTCAT CGAATTCATG GAATACTCAC AACACACGCT GTGACGAAGT 
AGGCGAGGAA TGTTGGCTCC AGTTTATCGC TTTCGATGTC CTTTATATCA ATGGTCCTCA 
CGCCCTTGAT TTTTTATCGA AGACCGTCTC ATCTTTTGCC TTAGCAAAGA AACAAAGTGG 
GTCTATTGTT GACCTTGAAT GCCTTGAAAG GAAAAAGATT CTATATGAAT TGATTGACGA 
GCAAGATAAC GAGGTCGAGA TAGTGCCGAC GGTGGTAGTG CGACCAAACG GGCAAACCTC 
TCCCGGACAT GATTATTTCA GACTCTCCAA TCCTACAATG GAATGCGGAT TTCCTGCTCG 
CGATTTGGAT TCAATTGCAC GAATGTTCCA CCAGCCCAAG AATGATCTAG GCACAATCGA 
TGCTCAGAGA AGACACGGAT TGAGTGACGA ACTAATGCGC AAGGCTCGAG CTCAGGCTGT 
AGAAAGCCAC TATCGAAAAG TCGTTGAGGA CATGAGGCTA GAAGGCCTCC TTTTCAAGGA 
CTTGTCCACT CCATACATTC TCGACAAAAT TTCTCGAAGT TTTGGATACT GGCGCAAGTT 
CAAACCCGAT TATTTCAATG GATCCGTTGC AAGCGATCTC GATGTTGTAA TTATCGGCGC 
ATACTTTGCC TCCGGACTTC GCCTCTCCGG CAAACCATCG AGCTTCCTTT GTGCATGTAC 
AGATTCTTGT GATTCTGAAT ACTATTTTCC CATGTGCAAA GTCAACGCCG GTTCTATGGA 
TAGAAACTCG TTTTCTCAAC TTTTGTACGA AACTGGCTTC CGCGCGCCAT GCGATCGACC 
TGATCCAAAT GCGGAGGAGA GCAAGATGGA ATATGGACGT TGGTTTCGTG AGGAGGACCA 
TGGAAAAGCG CTTCCTGATT TCATTACCGA TCGGTCTCAT CAGAACAATA GCCGGGACGG 
TAGATGGCGG TTTAGAAAAG AAGACTACCC AGACATATGG ATCAACCCAT CTGACTCATG 
TGTTCTTACT TTGAACGCGG GAGACATAGT GAGCAGCGAG GCGTTTCCAT CCGGTCTTAC 
CCTACGCTTT CCAAGAATTG TTAAGGTACG CATAGGTGCG GATACGAAGG ATCCCACAGA 
AGTCGAAAGC GATCGGAGTC TTCAAAAAAT TTTGCAACAA GTTTTGAAAG AAAGATGTGA 
AAGTAAAGGT GAAGCGAATG GAATCTGCTC AACGAAATCG TTCACCAGAG CCAAAGCGCA 
GCAGTTCTGC CGTTTTCTTA CCGAGGAGGA GTATGTCCAG GGAAAGAATA GAAAAAATTC 
TACCGGCCGA TCGAAGACGC TTCTCCTAGT GCCCACAAGT CAACAGGTGA TGCTTTCAGA 
AAGCAAGGTC CTCACTGGGT TGTCGTTCCA TGTACTGGAT GGAAGGTACT CAATAGATTC 
GGACGACGTC GCAGTCGATG AAGCAACAGA AGAGGGCTGG CTAGAAAAAG CCTTGTCAGT 
CAGAAGCAGC AATGACGTCA AACACTTTAT AGCAAGACAC AACGGAAAAG TCTTGCTGAA 
TCCAGATTCA AGCATGTTTG TGATAGGAGG CAGTGAAACT GATGCGCGCG TTATCACATA 
CATCCAAGCT ATTAATCGGG CGAGAACGTC TCTAGACAGG CGGACGAAAG AAACTGACAG 
ATATCGTCGA ATTGCTGGGT CCGCCGGTGT ACTGCGGTGG ACGTTCGTTT TTTCTTTCGT 
CCAAAGTCAT TTAGGAGACG CGGATGTATC AACAAGTGCT TTAATGTTCA ACCCTACAAT 
GCTCGACTTT CTTAAAAGAG CGCAAATTGA AGCAGAGGAA CTGGAATTTA TGGCTGATTT 
GTCTTCCAAA AGCTCTCTTC GTAGGGCTTT AGGTTTGACG TCGAAAAGAA AACGAACGGG 
ATCCGACAGT TTTTTCTTAG GTGATTGGAG AGAGAGGGTA TTTTCCTGCC TTCCTACGAT 
GGAACGTTGT ATTCTATCTT GCCGCGTCCA ATCAGTCGGC CCCTTTAAAT CAGTGAAGGC 
TGACACTCCA TCTAACGTCA TACCAAGCGT TGTCTGTCCT GTCACTGTTA ATGACGACAC 
GATTGAGTCT GTACTTCCGC TCGCTCGAAT GATGGGGGCT GTTGTGGTGC GAGAGCCACG 
AAAAGATCTG ACCCATGTTG TCTGTCATAT GATTGTTCAT GACATAGTTA AACACAAAAG 
AGGCATGTCA CTAGATCTTT TCGAAAACCG AGAACAAGGT ACAGCTTTCA AGAGAATCCT 
AGATGATCTT CAAATCAAGC ACAACTTAAG CCATGATATT CTCTTCGTAA CGCCAAATTG 
GATCCGCGCT CAGTGGCCAA GTCACGCACG TTGAGCTATT CGGATATAAA TTAGAAAGAA 
TCACCTCAGC ATAGTTAGAC AAAGACGCTA CTCGTTAGGC TACGATGTGC TGAACTATCC 
GTGATACTTT CTCTCACATG CCCTTAGTTT CTTTGGCAGT TCGCTAGACA TGAGCATTAG 
TGATTCGATC ACAGCCTTGT CTTCTCCTAT GCAAACATGT TCTGTATTGC GTCGGTCATC 
GGTGCAATCC TTCGCGCATG ACAGTTTGAG TCTTTTCTTT GGTGGTCTTG ACTGTGAATA 
AATGTGCTGC TCCTCACTTG TGGAAAACTT ATCATACACT TCGTCCCCAC TGGAAGCTTT 
ACTACTTTCT GAAACGAAGG GATTTAATCG CAGGTTGTCT CGAGGAACAA AGCGATACTG 
CTCGTCCACC ATTTCGCCAT CTCGAATAGG ACGCAGACAG AGCAAAAGCT CTATCACTTC 
TTCTCTGCTT GATGTCATGC TTTCGACTTC TGCGGATGCA TAAAGAGATT TCGCTTCTAA 
TGACGCCTTC GAGGTCGACC TCGATTTCGT TTCCTCCCGT GAAGAAGCGT CGCTCTCCTT 
ATTTAATTCC GCTGTTCGGA TCGACGAAGT AACCTCACAC CATAGCGTTG TCAAATCGTT 
CTTAATTAGA CAGACATTGC AAGTGGGAGC AATCGGTTTT GGTCGTCCTG TTGTAAAATG 
TGAGAGATTT CGATGCCTCG TCCACGGGAA GCAATATTTC AAATGGTTAT TCTTACCGTT 
GGACTCGGAT GAGTCACTGG AAGACGATGT CTCATCTCTT GAGCCGTTCG ATTCTCGGTA 
ACCAGAGTCA TCCCCTGATG AAGAGGGTTC TGGTCTATGT TGAAGAGAAG ACAATCTAGC 
TGATGCGTTG TTCGCCGTTA CATCAGCGCC GATCACATCA TCTTTGAAAG CTGTTCCTAA 
TTGCTCAACC AATTCCTGGT CTTTCATTTT CTTATTGTGC CACCGAACAT TCCTAACCAA 
GTTTGCATTG GCCTTTTGCA ACTTCTTAGT GTCAGTCACA TAACTCGAAT TGGAATTATC 
ACTGCTAAGT GCTGCTTTTT CAGACCTGTC ACTCTTTTTT GCATCTTTTC CAGAACGAGC 
AATTTGAGCG TCCGCATCAG ATCCACTATT TTCCATTGAT GATGTTGTCG GAGATCGACT 
GAGCGATTGG CTATTTGTCA ACGACGACGG TATTCTGTTT CCAAGCTGGT TCCTGGTTGA 
GCTATCTGAA TTGTTTTTGC ACTCAACATC GCAAATAGCC TTGACCTTTA CAATTGACAG 
CGGGAAGACA GGATCATATC CGAGAGCCGC ATCGCTTATC GACGTGCCTG CTTTAGCTTC 
GACATTACTT TCCTCCTTGG CACAGTTTGC ACCGTTCTTC GCCGGTGAAG CCTGAGTGTT 
TGCCACCTTG TCGAAATCTA CAAGCTGCTC AACCAAAAAG CTAAGCTTTC CCCGAGAGTT 
TGGAACGAGT AGATCTGTGA GAGGCACACC AATCAAGTCA TCGATCTTGT GCTTAAGCAC 
GCGCTCCACT TGCGCGCTGC AAAACGTGAT GATACCTTCT CGATCGACAA CAATAACTAA 
ATCAGGAAGA AGAGCTAGAA TAAGTGCTTG GCGCTTCAGG TGAGCATTCA TTTCCGTCAT 
CTCTTTAACT AGAGTTTTCT TTCGTAGTCG TGATGAGCTA GCCGATCTCC TGTTGGCCAC 
GCGCTTGGCG TTCCGTTTCT CCTCTTTTCT CCTTGCATCT GAAAGCAAGA TAGCAATGCT 
CTGAGGTACA GTCTGGTTGA GTCTATGCAA CATCTTTACG TGTTGTTCTG TGTGAACACA 
CA 

 

Protein sequence

MPNSIHLASR EDARGDQDER HYFDGPLLDI EDDEYDVEDE PLAEVDNPTT DAGPKPSYME 
PSYERASAVS FSRLSQQMEY LYRLKTQNVV HPPDKVSKLK RLLPPALISK ISRPTKTSDP 
PQSLFPILRL LLPERDGSRR IFTKENTLAK AYGRAFGLPP ASTDYQKLLY YSDPHIVGSK 
STGTGDFSEV LRQVLEKRIS LQKNGSGVTV GQVNALLDEL AVIGKPPTRS NHDWRNREAE 
LNDFQLKPKN SASKAELQAN WVTKLHCLGL TPLEHKWIIR IILERLQITL GSTVILAWYH 
PLAPSFWSAH NSLKAVCNKL CQPGVFELRH NLAEDGGDDD EAPSTLAPYF KSTHLTHVQL 
GNPFSPMASE RTGFHTVLSD MSSRHRDFTG EERCYRYEAV IRSLAFKFPT FAIETKLDGE 
RLLVHYFRNG TVKLHTRQGN WYSELYSPVL GPALRRAVGK HDLDLILDGE VLAWDNERHE 
TVPFGNNRTI AKMRYSWMRK AGILDERDIN LHNGENDVKR INSSNSWNTH NTRCDEVGEE 
CWLQFIAFDV LYINGPHALD FLSKTVSSFA LAKKQSGSIV DLECLERKKI LYELIDEQDN 
EVEIVPTVVV RPNGQTSPGH DYFRLSNPTM ECGFPARDLD SIARMFHQPK NDLGTIDAQR 
RHGLSDELMR KARAQAVESH YRKVVEDMRL EGLLFKDLST PYILDKISRS FGYWRKFKPD 
YFNGSVASDL DVVIIGAYFA SGLRLSGKPS SFLCACTDSC DSEYYFPMCK VNAGSMDRNS 
FSQLLYETGF RAPCDRPDPN AEESKMEYGR WFREEDHGKA LPDFITDRSH QNNSRDGRWR 
FRKEDYPDIW INPSDSCVLT LNAGDIVSSE AFPSGLTLRF PRIVKVRIGA DTKDPTEVES 
DRSLQKILQQ VLKERCESKG EANGICSTKS FTRAKAQQFC RFLTEEEYVQ GKNRKNSTGR 
SKTLLLVPTS QQVMLSESKV LTGLSFHVLD GRYSIDSDDV AVDEATEEGW LEKALSVRSS 
NDVKHFIARH NGKVLLNPDS SMFVIGGSET DARVITYIQA INRARTSLDR RTKETDRYRR 
IAGSAGVLRW TFVFSFVQSH LGDADVSTSA LMFNPTMLDF LKRAQIEAEE LEFMADLSSK 
SSLRRALGLT SKRKRTGSDS FFLGDWRERV FSCLPTMERC ILSCRVQSVG PFKSVKADTP 
SNVIPSVVCP VTVNDDTIES VLPLARMMGA VVVREPRKDL THVVCHMIVH DIVKHKRGMS 
LDLFENREQG TAFKRILDDL QIKHNLSHDI LFVTPNWIRA QWPSHAR