| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45453 |
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| Symbol | |
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| ID | 7200557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | + |
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| Start bp | 198279 |
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| End bp | 199849 |
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| Gene Length | 1571 bp |
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| Protein Length | 458 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179601 |
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| Protein GI | 219117618 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00124507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTGAACACT CATTCCCGTG ACCCCCTTGT GTACACAAAC ATCTTTTTTT CGACTCTTTC
ACAAAACAAA CCAGTAACCA CTCTTGGGTA TCTCCTTGGT TTCCTCATTT GGGCATTCAT
GACGACCCGT AGCATGGGAC GTCGACCATT GTGGTACGGT TACTTACTGT TGGTGTTGAC
GATTCCGGAA CCGAGTTGTG CGCGCGTACC GTGGGGGCAC GCCACACCGT TGGTCTACTT
CAAGGACGCG TCGTCGTCGT CCTTCTCTCG CTCCCTGTCG GCAGCATCGA CGTCCTTTCC
GGCGCCGTTA CCGGGCAGTA GCAGCAGTAG CAGCAACGGC GGTAGTTCCG CGTCGCTGTC
TCGGGGTGGA TCGACCAAGA CGATCGTTAG CGTCGACGAT GGCGTGGATA CTCTCGATCC
GGAAGCCGCA ACACTGTCAC CATCGGCACC GTTACTGCCG GAGGAATCGA CAACAGCGTC
GTCATCCTCA ATAAAATCCT CGGAAGAGAC CACGTCGACG GCACGATCCG TCACGGGAGG
CGCCTTCAAC AGCAGTGTGG TGACTAACAA CAGTCAGAGT GCCGCCGAAA CGACACCGCC
TGGTACGAAA GCGAGCACGT CGGCAGCCGT TGGTCCCAAG AAGGTGACAA CCGAATACGA
ACAATTGCCT CGGCGCGGCT TGTGGAAACT CATTCCACGA TCCAACAAGA ACGATCACAA
ACGGATTGCC AAAACACTCA AGAATCGCAA CCACACCAAC AAGCGGCGTA AATTTATGCA
CGCGTCCTTT GGTCTCTTGT TCGCCACGCT TAATCACGTC ATTCCCCGGT CCAAGTTTGT
CCCCGGCATG GCTGCTTTAT CCAGTGCCAC GTTACTTATG GAACTGCTCC GTTATCGCAA
CGAGTTTGGC TGGATGAACG ACGTCCTACA TTTCGTGCTC GGAAAGTCAC TCCGCAAACA
CGAAATGGAA GGGAAATTCA CCGGTTCCTT TTATTTCTTT ACCGGTGTCA CCCTCACGGC
CTACCTCTTC CCTCCCACCG CCGCTACGCT CGGAATTTGC CAACTGGCCA TTGCCGATCC
TACCGCGTCC TACTTTGGAA GGCAAACCCG ACACGTCTAC TGGAGTCGGA TTGAAAACGG
TCTGGGTGGA TTCGGTCGTA ACAAGGGTAT ACTGGGATTT CTCGGCGGCG CCGCCTGCTG
CGTACCCTTC AATTACCGAG TTTTGAAACT AGCTAAATTC GGCGCCGTCC CCGTATCCAA
CACGGCCGTG TTGGCGGCGT CCGTGGCCCT GGGTCTGGCT GGCGCCTTGG CCGATTTGGC
CGTCCCCACT CCCGCCCTCG TTCTACCGAA AAAGGTCCTC GGCGTACGGG TACCACCCTT
TCACTTGGAC GACAACTTCG TCGTCCCCGT AATGTCGGGA TGGGCCTGCG TCCGCATTTT
TGACGCCCTG GGTTGGTCGC ACACCCTCGC GCTCGCACCC TTGCTCGTAC TGTAAAATAC
GTACCATCGC GTTTTCGTGT TTTGGCAAAT GAAATGGGAA ACACCCCTCT AGCTTGCTGT
TTTTATACTC T
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| Protein sequence | MTTRSMGRRP LWYGYLLLVL TIPEPSCARV PWGHATPLVY FKDASSSSFS RSLSAASTSF
PAPLPGSSSS SSNGGSSASL SRGGSTKTIV SVDDGVDTLD PEAATLSPSA PLLPEESTTA
SSSSIKSSEE TTSTARSVTG GAFNSSVVTN NSQSAAETTP PGTKASTSAA VGPKKVTTEY
EQLPRRGLWK LIPRSNKNDH KRIAKTLKNR NHTNKRRKFM HASFGLLFAT LNHVIPRSKF
VPGMAALSSA TLLMELLRYR NEFGWMNDVL HFVLGKSLRK HEMEGKFTGS FYFFTGVTLT
AYLFPPTAAT LGICQLAIAD PTASYFGRQT RHVYWSRIEN GLGGFGRNKG ILGFLGGAAC
CVPFNYRVLK LAKFGAVPVS NTAVLAASVA LGLAGALADL AVPTPALVLP KKVLGVRVPP
FHLDDNFVVP VMSGWACVRI FDALGWSHTL ALAPLLVL
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