Gene PHATRDRAFT_45443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45443 
Symbol 
ID7200550 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp165869 
End bp167098 
Gene Length1230 bp 
Protein Length273 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179805 
Protein GI219118044 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTCTTTTACA CAGTGTGTGG TACACCAACC TAGTTTACTG TTCTACCATG AAGTTTGCTA 
CTGCTGCTAC TGTCACGCTT TTGGCTCTTT CTACGGTAGA TGCCTTGAAC GTTAAGAAAC
TCTTTCGTTT CGGAAAAACT TCCCTTCCCA AAGACAGCTC TCCCAAGCCG GCGGCCAAAG
GCGGCTACGA TCTGGATGTG TCGGAACTCT TTGACGGCAA CAATAAGTTC ATTGCGGACA
AGCTCGCCGG TGACCCCGCG TACTTCGACA CCCTCGGAAC CGTTCACTCC CCCAAGTACT
TGTACATTGG TAGGTTTTGT TTCAGAAACG ACGAGGTCCA GGACAATGAT GAGGGGCAAT
CGAATCTATT CTCTCTGTTA TTGATATTCA TGATGTGGGA GGTTGGTCCC TTCTCGTCAG
ATTTACATCG TAGTATGGCA CTGACACGCT ACCTCCTTCT TGCATTGCTT CTTGTTGTTG
CGTTGTCTTT CGTCTACTCT AGGCTGCGTC GATGCTCGCG CTCCCCCAAA CATGATCATG
GGCACGGAAG CCGGTACCAT GTTGACGGTC CGCAACATCG CCAACATGGT CGTCAACAAC
GACTTGGCCG TCATGTCGGC TATTCAATTC GGTATCAACG TACTTAAAAT CCCCAACGTA
ATCCTGTGTG GACACTACGA ATGCGGCGGT GTCCGAGCTT CGGTCGCCAA TGTCGACCAC
GCTCCGCCGC TCTCCATCTG GCTCCGTAAT ATCCGGGATG TCTACCGTTT GCACGCCAAG
GAGCTCGACG CCATTAAGGA CCCCGAAGAA CGTCACCGTC GCCTCGTCGA TTTGAACGTC
ATTGAACAAT GCGTCAACCT CTTCAAGACC GGAGTCATCC AGGCTAAGCG CATTGAAAGC
TACAAGGATG GCGGTGTGGC CATTCCTCAG GTGCATCCCG TCGTCTTTGA CCCTAAAACG
GGTGAGGTCA AGAAACTCAA GGTTGACTTT GACAAGTACA TGGCCGAGAT CAACGGCATT
TACGATTTGT ACGATCTGGA AAACGCCAAG GTCCCCATGT AGGTCCAAAA TTTCGAATTC
AAAAATATTT TTTGTTTTTG TGCTACGTTT CTGGCGACAA CGGAAGTGAC GTGGGGATGT
GCTCCGCCCA CCAAAAGGGA GACCGTCCTT TTGGGTGCCT ACGACCTACT TTTAACTTTA
CTAAAAACTT GGGTGATTTG TAAAAATGAC
 
Protein sequence
MKFATAATVT LLALSTVDAL NVKKLFRFGK TSLPKDSSPK PAAKGGYDLD VSELFDGNNK 
FIADKLAGDP AYFDTLGTVH SPKYLYIGCV DARAPPNMIM GTEAGTMLTV RNIANMVVNN
DLAVMSAIQF GINVLKIPNV ILCGHYECGG VRASVANVDH APPLSIWLRN IRDVYRLHAK
ELDAIKDPEE RHRRLVDLNV IEQCVNLFKT GVIQAKRIES YKDGGVAIPQ VHPVVFDPKT
GEVKKLKVDF DKYMAEINGI YDLYDLENAK VPM