Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45390 |
Symbol | |
ID | 7200487 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 10431 |
End bp | 14232 |
Gene Length | 3802 bp |
Protein Length | 926 aa |
Translation table | |
GC content | 60% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179564 |
Protein GI | 219117541 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000123588 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCGTTTTCCT TAACTGTGAT CTCCATCGTC GTTTTGTGTT CTTCAATAGA ACTACGAAGC AACCCCTCCG TCTTTCAGCT CCCACCCCTG CCCTACCGCC CATCCGCCTT CTCTTCAGTC CTGATGTCGA CCTCCGCCCA GTTCAAAATG AGCGACTTCC CTCACAAAGT CCTCGATCCA ATCGCCACCA CCACCGTTCC GCCGACCTAC GCCACTCTCA AAGTGGCCCA ACGTCAACTC AGTACCAACG CCGCCGCCAT CCCTACGCTC AATGGTGGTG GCGCCCACGG CCACATGGCC CTCACGCTTA CCGCCCGCGC CTACGCCGAC ATCAGCGACG TCCCATTCGA CATTCCCGTC GCCCCTCCGG CCAACCCTCC CGTCGGCACC ACGCAACCGC AAATCACCGA GTTCAACCGC ATCCACCAAC GCAATGCCGA CGTCTACAAC CTGTACGTCG CTGTCAATAA TGCCCTCCGC CAGCAACTTC TCGACGCCCT CCCGAAGATT TACGTACGCG CCCTTGCACA TCCCATTTTC GAATTCAGCA CCGTTACCTG CCTCGACCTC CTTTCGCACC TCTGGACCAA ATATGGTACC ATTAAGCCTG CCGACCTCCA GAAAAATTTC CAATCCATGT ACACCCCATG GAACACTGCC GAACCCATCG AGACTGTTTT CTTACAGCTT GACGAAGCTA TCGCGTTTTC CATCGACGGC AACGACCCCA TCTCCGAGGC CGCCGCCGTT CGTGCCGGCT ACGACGTCCT AGCTCACTCC GGCCTCTTCC CTCAGGACTG CAAAGACTGG CGCAAATTAC CCCTTGTTTC TCACACCCTT GCCAACTTCC ATCAGCATTT CACTCTCGCC GACGAAGACC GGCGCCTCAC CGCCACCACT GGATCCCTTG GCTACGCCAA TCTTCTCGCG GCCACTCCCT CTCTGGCTCC AGCCACGGTT TCCGACACCC TTAGCCTTCC TTTCTCCGCG CTCTCTGTGT CCCAGACTTC CGTCTCCTCT CCAGAAATGA CGTATTGCTG GACTCACGGA ACCAGCAAGA ACCGGCGCCA CACAAGCGCC ACGTGCAAAA ACAAGGCCCC TGGCCATCGC GACGACGCGA CGGCCACCAA CACTCTTGGC GGATCAACCA AGATTTGGAC TGCCCCCAGG CCTCCTGAAT AGGAAGGAGG GACGGCTACG CCGACGATTA AAACTAGTAA TACCGATTCT TTACATCATA TTACTAGTCT TAATTCGTCT GTAGTCCCCT CCCCGCCTAG TACACACACC TCCGCCATTG CCGACACTGG CTGCACCGGC CACTACATTA CGGTCGACTG CCCTCACACC CACAAGCACC CAGCAAACCC CAGCCTCGCC GTCCGTGTCC CAAATGGCGC CGTCCTCCGC TCCAGCCACA TTGCCACCCT GGCCCTGCCT GGTTTCTCCC CTGCCGCCTG CCAAGCCCAC ATTTTTCCTG GGCTCGCTTC CCATCCGCTC CTCTCCATTG GGCAACTGTG CGATGACGGC TGCACGGCCA CCTTCTCTGC CACTCGCCTC GACATTCATC GCGACGCTAC CCTGCTGCTC TCTGGGGCCC GCTCCCCCCA CACTGGCCTT TGGCACCTTG ATCTTGCCCC AGCTCCCTCT CCCGCGACGG CCCATGCCCT TGTTCCACAC ACACCCCTTG CCGACCGCAT TGCTTTTATC CATGCCTCAC TCTTCTCCCC GGCACTTTCC ACGTGGTGCC AGGCACTTGA CTTGGGCCAT CTCGCCACCT TTCCGGACCT TTCATCCCGG CAAATCCGCA AGCATCCACC CAGCTCCTCT GCCATGATCA AGGGTCACCT CGACCAACAA CGAGCTAACC TTCGCTCCAC CAAGCTTCCC CCGGTCAGTC CTCCTACCAC AACGACACCT CCCGTCGACC ACGAGCCTGA CAGGGATCCT CCCGATGCCC CACCGGTCAC ACGCACGCAC CACGTCTTCG CTGCGCACCA GCGTGTTACC GGCCAAATCT ACACAGACCA ACCGGGACGT TTCCTCACTC CGTCCAGTGC AGGCCACAAC GACATGCTTG TGCTTTATGA TTACGACAGC AACGCCATCC ACGTCGAACT CATGAAGAAC AAGTCCGGCC CGGAGATACT GGCCGCCTAC AAACGCGCTC ATACCCTTTT CACCCAGCGT GGCCTCCGTC CCCAACTCCA GCGTCTGGAC AATGAAGCCT CTGCAGCCCT CCAGTCCTTT ATGACCTCAG AACACGTTGA CTTTCAGCTG GCACCCCCCC ATCTACACCG TCGTAATGCA GCCGAGCGGG CCATCCGCAC CTTCAAGAAC CACTTTATTG CTGGCCTCTG CACCACTAAC CCGGATTTTC CATTACACCT TTGGGACCGC CTCCTCCCAC AAGCCCTTAT CACCCTCAAT CTTCTTCGTC GCTCCCGCAT CAATCCCAAG CTGTCCGCAC ACGCCCAGCT TCATGGTGCT TTCGATTACA ACCGCACCCC GCTTGCTCCT CCCGGTACTC GCGTCCTCGT CCATGTCAAG CCGTCCGTCC GCGAAACTTG GGCCCCCCAT GCTGTCGAAG GTTGGTACCT CGGCCCCGCC CTGCACCATT ACCGCTGCCA CCGAGTCTGG GTCACGGAAA CACGTGCCGA ACGCGTTGCT GACACCCTTT CCTGGTTCCC GACCCGCATT CCCATGCCCA CCGCTTCGTC CACCGACCGC GCCCTGGCCG CCGCCCGCGA CCTGATCCAT GCCCTCCAGA ATCCCTCCCC TGCGTCTCCA TTCGCCCCCC TCGACGCCAC CCAGCATCAG GCACTCACCC AACTTGCCAA TCTCTTTGCC ACCGTGGCCG CCCCGGCCGC CGCCGTCCCT ACATCCGCTC CCACGCCTCC GGTCCGTCCT CCTGCCCCAG CACCTCCCCC TTCTCAGGTC CGCTTTGCCG TTCCTCTCGT CACGGCCGAA CATGCCCCTG CACTTCCGAG GGTGCCCATT CCGGCCGCCG CACCTCCGAG GGTGCCCACC ATAGCCACCT ATCACTCTCG CACCGGCAAC CCAGGCCGTC GCCGCCGCAA AGCACGCACA CAACCGGCAA CCCCAACCCT AGTACCAGCG CATCCACACA ACACCCGCAC CCGGCCCTTT CTTGTCCCGG CCTCTGCCAA CGCTGTTGTC GACCCCGCCA CCGGCGCCTC ATTGGAATAT CGGCACCTGC GCTCCGGCCC CGACGCTCCC GATTGGATTC GCGCCGCCGC CAACGAAATT GGACGGCTCA CTCAAGGTAA CCCGCCCCAC AGTTCCACCG GCAGCCAAAC CATGCACTTT ATCGCGCATA ATGCCATTCC TCCCGGCCGC AAGGCAACCT ACTTACGCAT TGTTGCCAGC ATTCGCCCTC AGAAATCGGA ACCCAAGCGA ATCCGGTTTA CCGTCGGTGG CAACTTAGTT CAGTACCCCG GAAAGGTTAG CACTCCCACC GCGGACATCA CCACCGCCAA GATCCTGTTC AACAGTGTCC TCTCCACACC CGCGGCAAAG TTCATGTGCA TAGACATCAA GGATTTCTAT CTAGGCACAC CCATGGCTCG CTACGAATAC ATGCGCATCC CGGTCCCCGA TATTCCCCCG ACCATCTTGG CTCATTACCA GTTGACCCCA CTCATACACA ACAATTCCGT TACCGTCGAA ATTCGCAAAG GTATGTACGG CCTTCCCCAA GCCGGCATTC TCGCTCATGA TCGCCTGGTT GAACACCTTG CTCGGCACGG CTACGTCAAG ACCAAGCACA CTGCCGGCCT TT
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Protein sequence | MSTSAQFKMS DFPHKVLDPI ATTTVPPTYA TLKVAQRQLS TNAAAIPTLN GGGAHGHMAL TLTARAYADI SDVPFDIPVA PPANPPVGTT QPQITEFNRI HQRNADVYNL YVAVNNALRQ QLLDALPKIY VRALAHPIFE FSTVTCLDLL SHLWTKYGTI KPADLQKNFQ SMYTPWNTAE PIETVFLQLD EAIAFSIDGN DPISEAAAVR AGYDVLAHSG LFPQDCKDWR KLPLVSHTLA NFHQHFTLAD EDRRLTATTG SLGYANLLAA TPSLAPATVS DTLSLPFSAL SVSQTSVSSP EMTYCWTHGT SKNRRHTSAT LNSSVVPSPP STHTSAIADT GCTGHYITVD CPHTHKHPAN PSLAVRVPNG AVLRSSHIAT LALPGFSPAA CQAHIFPGLA SHPLLSIGQL CDDGCTATFS ATRLDIHRDA TLLLSGARSP HTGLWHLDLA PAPSPATAHA LVPHTPLADR IAFIHASLFS PALSTWCQAL DLGHLATFPD LSSRQIRKHP PSSSAMIKGH LDQQRANLRS TKLPPVSPPT TTTPPVDHEP DRDPPDAPPV TRTHHVFAAH QRVTGQIYTD QPGRFLTPSS AGHNDMLVLY DYDSNAIHVE LMKNKSGPEI LAAYKRAHTL FTQRGLRPQL QRLDNEASAA LQSFMTSEHV DFQLAPPHLH RRNAAERAIR TFKNHFIAGL CTTNPDFPLH LWDRLLPQAL ITLNLLRRSR INPKLSAHAQ LHGAFDYNRT PLAPPGTRVL VHVKPSVRET WAPHAVEGWY LGPALHHYRC HRVWVTETRA ERVADTLSWF PTRIPMPTAS STDRALAAAR DLIHALQNPS PASPFAPLDA TQHQALTQLA NLFATVAAPA AAVPTSAPTP PVRPPAPAPP PSQVRFAVPL VTAEHAPALP RVPIPAAAPP RAVAAAKHAH NRQPQP
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