Gene PHATRDRAFT_45390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45390 
Symbol 
ID7200487 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp10431 
End bp14232 
Gene Length3802 bp 
Protein Length926 aa 
Translation table 
GC content60% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179564 
Protein GI219117541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000123588 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCGTTTTCCT TAACTGTGAT CTCCATCGTC GTTTTGTGTT CTTCAATAGA ACTACGAAGC 
AACCCCTCCG TCTTTCAGCT CCCACCCCTG CCCTACCGCC CATCCGCCTT CTCTTCAGTC
CTGATGTCGA CCTCCGCCCA GTTCAAAATG AGCGACTTCC CTCACAAAGT CCTCGATCCA
ATCGCCACCA CCACCGTTCC GCCGACCTAC GCCACTCTCA AAGTGGCCCA ACGTCAACTC
AGTACCAACG CCGCCGCCAT CCCTACGCTC AATGGTGGTG GCGCCCACGG CCACATGGCC
CTCACGCTTA CCGCCCGCGC CTACGCCGAC ATCAGCGACG TCCCATTCGA CATTCCCGTC
GCCCCTCCGG CCAACCCTCC CGTCGGCACC ACGCAACCGC AAATCACCGA GTTCAACCGC
ATCCACCAAC GCAATGCCGA CGTCTACAAC CTGTACGTCG CTGTCAATAA TGCCCTCCGC
CAGCAACTTC TCGACGCCCT CCCGAAGATT TACGTACGCG CCCTTGCACA TCCCATTTTC
GAATTCAGCA CCGTTACCTG CCTCGACCTC CTTTCGCACC TCTGGACCAA ATATGGTACC
ATTAAGCCTG CCGACCTCCA GAAAAATTTC CAATCCATGT ACACCCCATG GAACACTGCC
GAACCCATCG AGACTGTTTT CTTACAGCTT GACGAAGCTA TCGCGTTTTC CATCGACGGC
AACGACCCCA TCTCCGAGGC CGCCGCCGTT CGTGCCGGCT ACGACGTCCT AGCTCACTCC
GGCCTCTTCC CTCAGGACTG CAAAGACTGG CGCAAATTAC CCCTTGTTTC TCACACCCTT
GCCAACTTCC ATCAGCATTT CACTCTCGCC GACGAAGACC GGCGCCTCAC CGCCACCACT
GGATCCCTTG GCTACGCCAA TCTTCTCGCG GCCACTCCCT CTCTGGCTCC AGCCACGGTT
TCCGACACCC TTAGCCTTCC TTTCTCCGCG CTCTCTGTGT CCCAGACTTC CGTCTCCTCT
CCAGAAATGA CGTATTGCTG GACTCACGGA ACCAGCAAGA ACCGGCGCCA CACAAGCGCC
ACGTGCAAAA ACAAGGCCCC TGGCCATCGC GACGACGCGA CGGCCACCAA CACTCTTGGC
GGATCAACCA AGATTTGGAC TGCCCCCAGG CCTCCTGAAT AGGAAGGAGG GACGGCTACG
CCGACGATTA AAACTAGTAA TACCGATTCT TTACATCATA TTACTAGTCT TAATTCGTCT
GTAGTCCCCT CCCCGCCTAG TACACACACC TCCGCCATTG CCGACACTGG CTGCACCGGC
CACTACATTA CGGTCGACTG CCCTCACACC CACAAGCACC CAGCAAACCC CAGCCTCGCC
GTCCGTGTCC CAAATGGCGC CGTCCTCCGC TCCAGCCACA TTGCCACCCT GGCCCTGCCT
GGTTTCTCCC CTGCCGCCTG CCAAGCCCAC ATTTTTCCTG GGCTCGCTTC CCATCCGCTC
CTCTCCATTG GGCAACTGTG CGATGACGGC TGCACGGCCA CCTTCTCTGC CACTCGCCTC
GACATTCATC GCGACGCTAC CCTGCTGCTC TCTGGGGCCC GCTCCCCCCA CACTGGCCTT
TGGCACCTTG ATCTTGCCCC AGCTCCCTCT CCCGCGACGG CCCATGCCCT TGTTCCACAC
ACACCCCTTG CCGACCGCAT TGCTTTTATC CATGCCTCAC TCTTCTCCCC GGCACTTTCC
ACGTGGTGCC AGGCACTTGA CTTGGGCCAT CTCGCCACCT TTCCGGACCT TTCATCCCGG
CAAATCCGCA AGCATCCACC CAGCTCCTCT GCCATGATCA AGGGTCACCT CGACCAACAA
CGAGCTAACC TTCGCTCCAC CAAGCTTCCC CCGGTCAGTC CTCCTACCAC AACGACACCT
CCCGTCGACC ACGAGCCTGA CAGGGATCCT CCCGATGCCC CACCGGTCAC ACGCACGCAC
CACGTCTTCG CTGCGCACCA GCGTGTTACC GGCCAAATCT ACACAGACCA ACCGGGACGT
TTCCTCACTC CGTCCAGTGC AGGCCACAAC GACATGCTTG TGCTTTATGA TTACGACAGC
AACGCCATCC ACGTCGAACT CATGAAGAAC AAGTCCGGCC CGGAGATACT GGCCGCCTAC
AAACGCGCTC ATACCCTTTT CACCCAGCGT GGCCTCCGTC CCCAACTCCA GCGTCTGGAC
AATGAAGCCT CTGCAGCCCT CCAGTCCTTT ATGACCTCAG AACACGTTGA CTTTCAGCTG
GCACCCCCCC ATCTACACCG TCGTAATGCA GCCGAGCGGG CCATCCGCAC CTTCAAGAAC
CACTTTATTG CTGGCCTCTG CACCACTAAC CCGGATTTTC CATTACACCT TTGGGACCGC
CTCCTCCCAC AAGCCCTTAT CACCCTCAAT CTTCTTCGTC GCTCCCGCAT CAATCCCAAG
CTGTCCGCAC ACGCCCAGCT TCATGGTGCT TTCGATTACA ACCGCACCCC GCTTGCTCCT
CCCGGTACTC GCGTCCTCGT CCATGTCAAG CCGTCCGTCC GCGAAACTTG GGCCCCCCAT
GCTGTCGAAG GTTGGTACCT CGGCCCCGCC CTGCACCATT ACCGCTGCCA CCGAGTCTGG
GTCACGGAAA CACGTGCCGA ACGCGTTGCT GACACCCTTT CCTGGTTCCC GACCCGCATT
CCCATGCCCA CCGCTTCGTC CACCGACCGC GCCCTGGCCG CCGCCCGCGA CCTGATCCAT
GCCCTCCAGA ATCCCTCCCC TGCGTCTCCA TTCGCCCCCC TCGACGCCAC CCAGCATCAG
GCACTCACCC AACTTGCCAA TCTCTTTGCC ACCGTGGCCG CCCCGGCCGC CGCCGTCCCT
ACATCCGCTC CCACGCCTCC GGTCCGTCCT CCTGCCCCAG CACCTCCCCC TTCTCAGGTC
CGCTTTGCCG TTCCTCTCGT CACGGCCGAA CATGCCCCTG CACTTCCGAG GGTGCCCATT
CCGGCCGCCG CACCTCCGAG GGTGCCCACC ATAGCCACCT ATCACTCTCG CACCGGCAAC
CCAGGCCGTC GCCGCCGCAA AGCACGCACA CAACCGGCAA CCCCAACCCT AGTACCAGCG
CATCCACACA ACACCCGCAC CCGGCCCTTT CTTGTCCCGG CCTCTGCCAA CGCTGTTGTC
GACCCCGCCA CCGGCGCCTC ATTGGAATAT CGGCACCTGC GCTCCGGCCC CGACGCTCCC
GATTGGATTC GCGCCGCCGC CAACGAAATT GGACGGCTCA CTCAAGGTAA CCCGCCCCAC
AGTTCCACCG GCAGCCAAAC CATGCACTTT ATCGCGCATA ATGCCATTCC TCCCGGCCGC
AAGGCAACCT ACTTACGCAT TGTTGCCAGC ATTCGCCCTC AGAAATCGGA ACCCAAGCGA
ATCCGGTTTA CCGTCGGTGG CAACTTAGTT CAGTACCCCG GAAAGGTTAG CACTCCCACC
GCGGACATCA CCACCGCCAA GATCCTGTTC AACAGTGTCC TCTCCACACC CGCGGCAAAG
TTCATGTGCA TAGACATCAA GGATTTCTAT CTAGGCACAC CCATGGCTCG CTACGAATAC
ATGCGCATCC CGGTCCCCGA TATTCCCCCG ACCATCTTGG CTCATTACCA GTTGACCCCA
CTCATACACA ACAATTCCGT TACCGTCGAA ATTCGCAAAG GTATGTACGG CCTTCCCCAA
GCCGGCATTC TCGCTCATGA TCGCCTGGTT GAACACCTTG CTCGGCACGG CTACGTCAAG
ACCAAGCACA CTGCCGGCCT TT
 
Protein sequence
MSTSAQFKMS DFPHKVLDPI ATTTVPPTYA TLKVAQRQLS TNAAAIPTLN GGGAHGHMAL 
TLTARAYADI SDVPFDIPVA PPANPPVGTT QPQITEFNRI HQRNADVYNL YVAVNNALRQ
QLLDALPKIY VRALAHPIFE FSTVTCLDLL SHLWTKYGTI KPADLQKNFQ SMYTPWNTAE
PIETVFLQLD EAIAFSIDGN DPISEAAAVR AGYDVLAHSG LFPQDCKDWR KLPLVSHTLA
NFHQHFTLAD EDRRLTATTG SLGYANLLAA TPSLAPATVS DTLSLPFSAL SVSQTSVSSP
EMTYCWTHGT SKNRRHTSAT LNSSVVPSPP STHTSAIADT GCTGHYITVD CPHTHKHPAN
PSLAVRVPNG AVLRSSHIAT LALPGFSPAA CQAHIFPGLA SHPLLSIGQL CDDGCTATFS
ATRLDIHRDA TLLLSGARSP HTGLWHLDLA PAPSPATAHA LVPHTPLADR IAFIHASLFS
PALSTWCQAL DLGHLATFPD LSSRQIRKHP PSSSAMIKGH LDQQRANLRS TKLPPVSPPT
TTTPPVDHEP DRDPPDAPPV TRTHHVFAAH QRVTGQIYTD QPGRFLTPSS AGHNDMLVLY
DYDSNAIHVE LMKNKSGPEI LAAYKRAHTL FTQRGLRPQL QRLDNEASAA LQSFMTSEHV
DFQLAPPHLH RRNAAERAIR TFKNHFIAGL CTTNPDFPLH LWDRLLPQAL ITLNLLRRSR
INPKLSAHAQ LHGAFDYNRT PLAPPGTRVL VHVKPSVRET WAPHAVEGWY LGPALHHYRC
HRVWVTETRA ERVADTLSWF PTRIPMPTAS STDRALAAAR DLIHALQNPS PASPFAPLDA
TQHQALTQLA NLFATVAAPA AAVPTSAPTP PVRPPAPAPP PSQVRFAVPL VTAEHAPALP
RVPIPAAAPP RAVAAAKHAH NRQPQP