Gene PHATRDRAFT_45390 details

Gene Information

• Locus tag: PHATRDRAFT_45390
• ID: 7200487
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 10431
• End bp: 14232
• Gene Length: 3802 bp
• Protein Length: 926 aa
• GC content: 60%
• Product: predicted protein
• Protein accession: XP_002179564
• Protein GI: 219117541

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000123588
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCGTTTTCCT TAACTGTGAT CTCCATCGTC GTTTTGTGTT CTTCAATAGA ACTACGAAGC 
AACCCCTCCG TCTTTCAGCT CCCACCCCTG CCCTACCGCC CATCCGCCTT CTCTTCAGTC 
CTGATGTCGA CCTCCGCCCA GTTCAAAATG AGCGACTTCC CTCACAAAGT CCTCGATCCA 
ATCGCCACCA CCACCGTTCC GCCGACCTAC GCCACTCTCA AAGTGGCCCA ACGTCAACTC 
AGTACCAACG CCGCCGCCAT CCCTACGCTC AATGGTGGTG GCGCCCACGG CCACATGGCC 
CTCACGCTTA CCGCCCGCGC CTACGCCGAC ATCAGCGACG TCCCATTCGA CATTCCCGTC 
GCCCCTCCGG CCAACCCTCC CGTCGGCACC ACGCAACCGC AAATCACCGA GTTCAACCGC 
ATCCACCAAC GCAATGCCGA CGTCTACAAC CTGTACGTCG CTGTCAATAA TGCCCTCCGC 
CAGCAACTTC TCGACGCCCT CCCGAAGATT TACGTACGCG CCCTTGCACA TCCCATTTTC 
GAATTCAGCA CCGTTACCTG CCTCGACCTC CTTTCGCACC TCTGGACCAA ATATGGTACC 
ATTAAGCCTG CCGACCTCCA GAAAAATTTC CAATCCATGT ACACCCCATG GAACACTGCC 
GAACCCATCG AGACTGTTTT CTTACAGCTT GACGAAGCTA TCGCGTTTTC CATCGACGGC 
AACGACCCCA TCTCCGAGGC CGCCGCCGTT CGTGCCGGCT ACGACGTCCT AGCTCACTCC 
GGCCTCTTCC CTCAGGACTG CAAAGACTGG CGCAAATTAC CCCTTGTTTC TCACACCCTT 
GCCAACTTCC ATCAGCATTT CACTCTCGCC GACGAAGACC GGCGCCTCAC CGCCACCACT 
GGATCCCTTG GCTACGCCAA TCTTCTCGCG GCCACTCCCT CTCTGGCTCC AGCCACGGTT 
TCCGACACCC TTAGCCTTCC TTTCTCCGCG CTCTCTGTGT CCCAGACTTC CGTCTCCTCT 
CCAGAAATGA CGTATTGCTG GACTCACGGA ACCAGCAAGA ACCGGCGCCA CACAAGCGCC 
ACGTGCAAAA ACAAGGCCCC TGGCCATCGC GACGACGCGA CGGCCACCAA CACTCTTGGC 
GGATCAACCA AGATTTGGAC TGCCCCCAGG CCTCCTGAAT AGGAAGGAGG GACGGCTACG 
CCGACGATTA AAACTAGTAA TACCGATTCT TTACATCATA TTACTAGTCT TAATTCGTCT 
GTAGTCCCCT CCCCGCCTAG TACACACACC TCCGCCATTG CCGACACTGG CTGCACCGGC 
CACTACATTA CGGTCGACTG CCCTCACACC CACAAGCACC CAGCAAACCC CAGCCTCGCC 
GTCCGTGTCC CAAATGGCGC CGTCCTCCGC TCCAGCCACA TTGCCACCCT GGCCCTGCCT 
GGTTTCTCCC CTGCCGCCTG CCAAGCCCAC ATTTTTCCTG GGCTCGCTTC CCATCCGCTC 
CTCTCCATTG GGCAACTGTG CGATGACGGC TGCACGGCCA CCTTCTCTGC CACTCGCCTC 
GACATTCATC GCGACGCTAC CCTGCTGCTC TCTGGGGCCC GCTCCCCCCA CACTGGCCTT 
TGGCACCTTG ATCTTGCCCC AGCTCCCTCT CCCGCGACGG CCCATGCCCT TGTTCCACAC 
ACACCCCTTG CCGACCGCAT TGCTTTTATC CATGCCTCAC TCTTCTCCCC GGCACTTTCC 
ACGTGGTGCC AGGCACTTGA CTTGGGCCAT CTCGCCACCT TTCCGGACCT TTCATCCCGG 
CAAATCCGCA AGCATCCACC CAGCTCCTCT GCCATGATCA AGGGTCACCT CGACCAACAA 
CGAGCTAACC TTCGCTCCAC CAAGCTTCCC CCGGTCAGTC CTCCTACCAC AACGACACCT 
CCCGTCGACC ACGAGCCTGA CAGGGATCCT CCCGATGCCC CACCGGTCAC ACGCACGCAC 
CACGTCTTCG CTGCGCACCA GCGTGTTACC GGCCAAATCT ACACAGACCA ACCGGGACGT 
TTCCTCACTC CGTCCAGTGC AGGCCACAAC GACATGCTTG TGCTTTATGA TTACGACAGC 
AACGCCATCC ACGTCGAACT CATGAAGAAC AAGTCCGGCC CGGAGATACT GGCCGCCTAC 
AAACGCGCTC ATACCCTTTT CACCCAGCGT GGCCTCCGTC CCCAACTCCA GCGTCTGGAC 
AATGAAGCCT CTGCAGCCCT CCAGTCCTTT ATGACCTCAG AACACGTTGA CTTTCAGCTG 
GCACCCCCCC ATCTACACCG TCGTAATGCA GCCGAGCGGG CCATCCGCAC CTTCAAGAAC 
CACTTTATTG CTGGCCTCTG CACCACTAAC CCGGATTTTC CATTACACCT TTGGGACCGC 
CTCCTCCCAC AAGCCCTTAT CACCCTCAAT CTTCTTCGTC GCTCCCGCAT CAATCCCAAG 
CTGTCCGCAC ACGCCCAGCT TCATGGTGCT TTCGATTACA ACCGCACCCC GCTTGCTCCT 
CCCGGTACTC GCGTCCTCGT CCATGTCAAG CCGTCCGTCC GCGAAACTTG GGCCCCCCAT 
GCTGTCGAAG GTTGGTACCT CGGCCCCGCC CTGCACCATT ACCGCTGCCA CCGAGTCTGG 
GTCACGGAAA CACGTGCCGA ACGCGTTGCT GACACCCTTT CCTGGTTCCC GACCCGCATT 
CCCATGCCCA CCGCTTCGTC CACCGACCGC GCCCTGGCCG CCGCCCGCGA CCTGATCCAT 
GCCCTCCAGA ATCCCTCCCC TGCGTCTCCA TTCGCCCCCC TCGACGCCAC CCAGCATCAG 
GCACTCACCC AACTTGCCAA TCTCTTTGCC ACCGTGGCCG CCCCGGCCGC CGCCGTCCCT 
ACATCCGCTC CCACGCCTCC GGTCCGTCCT CCTGCCCCAG CACCTCCCCC TTCTCAGGTC 
CGCTTTGCCG TTCCTCTCGT CACGGCCGAA CATGCCCCTG CACTTCCGAG GGTGCCCATT 
CCGGCCGCCG CACCTCCGAG GGTGCCCACC ATAGCCACCT ATCACTCTCG CACCGGCAAC 
CCAGGCCGTC GCCGCCGCAA AGCACGCACA CAACCGGCAA CCCCAACCCT AGTACCAGCG 
CATCCACACA ACACCCGCAC CCGGCCCTTT CTTGTCCCGG CCTCTGCCAA CGCTGTTGTC 
GACCCCGCCA CCGGCGCCTC ATTGGAATAT CGGCACCTGC GCTCCGGCCC CGACGCTCCC 
GATTGGATTC GCGCCGCCGC CAACGAAATT GGACGGCTCA CTCAAGGTAA CCCGCCCCAC 
AGTTCCACCG GCAGCCAAAC CATGCACTTT ATCGCGCATA ATGCCATTCC TCCCGGCCGC 
AAGGCAACCT ACTTACGCAT TGTTGCCAGC ATTCGCCCTC AGAAATCGGA ACCCAAGCGA 
ATCCGGTTTA CCGTCGGTGG CAACTTAGTT CAGTACCCCG GAAAGGTTAG CACTCCCACC 
GCGGACATCA CCACCGCCAA GATCCTGTTC AACAGTGTCC TCTCCACACC CGCGGCAAAG 
TTCATGTGCA TAGACATCAA GGATTTCTAT CTAGGCACAC CCATGGCTCG CTACGAATAC 
ATGCGCATCC CGGTCCCCGA TATTCCCCCG ACCATCTTGG CTCATTACCA GTTGACCCCA 
CTCATACACA ACAATTCCGT TACCGTCGAA ATTCGCAAAG GTATGTACGG CCTTCCCCAA 
GCCGGCATTC TCGCTCATGA TCGCCTGGTT GAACACCTTG CTCGGCACGG CTACGTCAAG 
ACCAAGCACA CTGCCGGCCT TT 

 

Protein sequence

MSTSAQFKMS DFPHKVLDPI ATTTVPPTYA TLKVAQRQLS TNAAAIPTLN GGGAHGHMAL 
TLTARAYADI SDVPFDIPVA PPANPPVGTT QPQITEFNRI HQRNADVYNL YVAVNNALRQ 
QLLDALPKIY VRALAHPIFE FSTVTCLDLL SHLWTKYGTI KPADLQKNFQ SMYTPWNTAE 
PIETVFLQLD EAIAFSIDGN DPISEAAAVR AGYDVLAHSG LFPQDCKDWR KLPLVSHTLA 
NFHQHFTLAD EDRRLTATTG SLGYANLLAA TPSLAPATVS DTLSLPFSAL SVSQTSVSSP 
EMTYCWTHGT SKNRRHTSAT LNSSVVPSPP STHTSAIADT GCTGHYITVD CPHTHKHPAN 
PSLAVRVPNG AVLRSSHIAT LALPGFSPAA CQAHIFPGLA SHPLLSIGQL CDDGCTATFS 
ATRLDIHRDA TLLLSGARSP HTGLWHLDLA PAPSPATAHA LVPHTPLADR IAFIHASLFS 
PALSTWCQAL DLGHLATFPD LSSRQIRKHP PSSSAMIKGH LDQQRANLRS TKLPPVSPPT 
TTTPPVDHEP DRDPPDAPPV TRTHHVFAAH QRVTGQIYTD QPGRFLTPSS AGHNDMLVLY 
DYDSNAIHVE LMKNKSGPEI LAAYKRAHTL FTQRGLRPQL QRLDNEASAA LQSFMTSEHV 
DFQLAPPHLH RRNAAERAIR TFKNHFIAGL CTTNPDFPLH LWDRLLPQAL ITLNLLRRSR 
INPKLSAHAQ LHGAFDYNRT PLAPPGTRVL VHVKPSVRET WAPHAVEGWY LGPALHHYRC 
HRVWVTETRA ERVADTLSWF PTRIPMPTAS STDRALAAAR DLIHALQNPS PASPFAPLDA 
TQHQALTQLA NLFATVAAPA AAVPTSAPTP PVRPPAPAPP PSQVRFAVPL VTAEHAPALP 
RVPIPAAAPP RAVAAAKHAH NRQPQP