Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35478 |
Symbol | |
ID | 7200518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 1022685 |
End bp | 1023740 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179768 |
Protein GI | 219117967 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000617948 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAAGTG AAGACGAAGA CGTACTACAC AAATATAGAA AATATGATCC GCCGCCTCAA GAGTTGCCAG TCTACTCGTC CGATGAAGAC AGTAGCGGAT CATCGATATT GACTGCCAAC GCAGAGCCAC TCACCGCCAA GGCCGATTTG CTCAAAGTGT TGGACTACAT CATCATTGTT GGTAACCGTA ACCGATATCA AAGCTTACAA GCAACTAGGG AACAGACTTC GGAGACAACT ACGGGGTCAA ATGAGCTGTC AGAGATTGAA CAAACGGATG ATTTTGAGCT TAGTGGAATG CACGCTGATG ATTTCCAATT AGACCCGCAG AGAAGAAAGA AAAGTCGTTT GAGTGCAGCT TTGCTGTGGC CATCGTATGC CGCTTGGGAA GAAACTAACA GAACTGATGC GCTGGATTGC ACATGGTGTC ATCAATACAG TGACTGTATC GCGTTGCCAT ACAATAAGGT TCGATCCAAA GAACCACCAG CTTTGAAAGG TTTTTTTTAT ACGCGCACAG ACAGAGATTT GACATTGCGA TGCTGGAGGA AAGCTGTTCA TGCAGCATCA ACAGTCATGG TGCTGGAAGG GGTCAATGGG AATGTGAGGC TTGACCTGAC CTCACCCAAT TCAGCAGAGA AAGACGCCAA GGAGACATGC CTGAACCTAG GAATAGCTCT TTCGAATCTG AAACCATATA CTTGTCCATC TTGTTTCAAG GTCTTCCAAA GTTGCAGAGC CAGGGAATGT CACTTCTGGG GAGAAAATAA CCACAGAGGC TGTTGTTGGA GTCTTGTGCA CAAGAAAAGA CATTCTATTC TGAAAGAAGC CACCAACAAG GAAAGCACCA TTTGCCAACA CGTCTTGATG AGGTTGATCT TACGCTCAAT TCATCAAAAA TGTCATCAGT TGCCTAAAAT CCTGGATAGG AAATTCATTG TTTGTCTTCT TGGAGCAGCG AGATTGCATC ATTTACGTCT CCGACAGACC AGTTCAAAAC TTTCCCAATA TCCAGGCTCC GCTTCATTGG ATGAGCACAG TCCTGATCTT CCCTAA
|
Protein sequence | MSSEDEDVLH KYRKYDPPPQ ELPVYSSDED SSGSSILTAN AEPLTAKADL LKVLDYIIIV GNRNRYQSLQ ATREQTSETT TGSNELSEIE QTDDFELSGM HADDFQLDPQ RRKKSRLSAA LLWPSYAAWE ETNRTDALDC TWCHQYSDCI ALPYNKVRSK EPPALKGFFY TRTDRDLTLR CWRKAVHAAS TVMVLEGVNG NVRLDLTSPN SAEKDAKETC LNLGIALSNL KPYTCPSCFK VFQSCRAREC HFWGENNHRG CCWSLVHKKR HSILKEATNK ESTICQHVLM RLILRSIHQK CHQLPKILDR KFIVCLLGAA RLHHLRLRQT SSKLSQYPGS ASLDEHSPDL P
|
| |