Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35460 |
Symbol | |
ID | 7200512 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 972735 |
End bp | 973680 |
Gene Length | 946 bp |
Protein Length | 301 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179948 |
Protein GI | 219118343 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACGGCG ACAACATCAA AGGCAAGGTT TTTGTGATAA CAGGTGCCTA CAGTGGCATC GGAGTTGAAA CCACCAAAGC TCTACTATCC GAAGGCGCGA GCAAGGTCGT TATCGGAGGT CGACGTCAAA ATCTACAGGA TGATTTTATA AAAGAAATGA AAGAATCATT TGCGGCAGAT CGCGTTGACG GACACCTAAT CGATCTAGGT GATCTTGCAT CCGTGAAAAG ATTCGCAGAG TACGTAAACG CAAAGTACAA GACCATCCAT GTTTTAATCA ACAACGCGGG GGTCATGAAT ACGCCTCCCG GAGTGACCAA AGATGGATTT GAGCAGCAAA TGGGTATCAA CGTAATTGGC CATTTCCTGC TGTCAAAGTT GCTTATTGAT AAAACAAAGC GCCAAGTTTG GTTGTCGTCG ACGGCCCACA CTATCGGAAA AGGGCCACGG ATCGACATGA ATTACATAAA GACATTCTCT ATGGAGAACA AGAAGGGGTA TAGTGGTTGG AAAGCGTATC AACAAAGCAA GCTGGGTAAT ATTTTGGTTG CCAAGGAATT TCACAAACGC TATCCCAACG TTGAGACGGT TTCTTTGCAT CCGGTAAGCT CAAAATCTTA ACACTCACTT TGTTCCTATA AAGTCTGCTA ACGCTATTCT CGAATCATGG CAGGGTGGAA TAAATACAAA TCTGGGCCGC ACCACCAATT TCGTCAGCGC GCTGAAAATT CTTTGGATCG GCTTGCCGGA CGATTTGCGC ATGAAAAGCG TACAAGCTGG GGCCTCAACC ACCGTTACTT GTGCAGCGCT TCCATCACAC GAGCTTAAAG TCGCGGGGTA CTATCGGGAC TGCGATCCTT ATGAAGAGTA TGACTGCGCT AAAAATGAGG AAGATATGGC GGCCCTTTTC GATTATTGCG ATGAGGTTAC AAAAATGTTT CAGTGA
|
Protein sequence | MYGDNIKGKV FVITGAYSGI GVETTKALLS EGASKVVIGG RRQNLQDDFI KEMKESFAAD RVDGHLIDLG DLASVKRFAE YVNAKYKTIH VLINNAGVMN TPPGVTKDGF EQQMGINVIG HFLLSKLLID KTKRQVWLSS TAHTIGKGPR IDMNYIKTFS MENKKGYSGW KAYQQSKLGN ILVAKEFHKR YPNVETVSLH PSANAILESW QGGINTNLGR TTNFVSALKI LWIGLPDDLR MKSVQAGAST TVTCAALPSH ELKVAGYYRD CDPYEEYDCA KNEEDMAALF DYCDEVTKMF Q
|
| |