| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_35442 |
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| Symbol | |
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| ID | 7200428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | - |
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| Start bp | 928468 |
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| End bp | 930741 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179941 |
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| Protein GI | 219118328 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.725158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGTGA GGGATCCTAG ACTTAGAATT GGAGGGAAGG TGACGGCAAA GGCTTGTCAT
GTTGTGCATC TGAGCAAGTG CGCACGGAGA TATGGCGTCA ACAAGCACTC CAAGCGGCTT
GTTGGAACGG TTCTAGACGT CACGACCACC CCTGTATCCA TTACAACCGG GCGTACCTTT
ACTTTGATAA CAGCAGTTTA TGATTTTGGA GAGAGTTTGT TCAAGGAAAA AACACTGAAC
ATTCGGAGTG TAAAGGCATT TGTACCGCCA GAAGATGAAG GAATGTCCTT AATTGAGGAA
TTAGCAGCAG AGGCTTTGCA GGCAGCAGAA GCAGACATGG AAGCCGGAAA CTTGATGGAA
GAAAGTGTCG AAGCCCCGGT AGCCGAAATG GTTGAAACCC CGGCTGACAT AGAGCCCGAT
ACCTTGGTCG ACACAGAGCC CAATACCCCG GTTGACACAG AGCCCGATAG CCCGGTAGCC
GAAATTGTCG AGACCCTGGT TGACACTGAT ACCTCGCTTG ACACAGAGTC CGAAAACCCG
GTAGCCACAG TGCACCAAAC AGAGTGGTAT GTGAATGAAA GAAAAACCCG GCTGGATGTG
AATGGCCATG TCTATGTTAG GCACTTCCAT ATCCGTACTT CAGTTGGTGA CCTTATTGGT
CAAGACTCTG ACAATGGGGT GAGATTTTCG CGCCTCGAAT ATTTTCTGCT CATGTTTCCG
CCGACCCAGC TGACTACTAT GTGTCGGCTT ACAAATACTC AGCTTGCACA GCAAAACAAG
AATCCAATCA CATCCGGAGA ACTTCTTCGG TTCTTTGGAA TGCTCATACT CACTACAAAG
TTTGAGTTCA GTAGCCGGGC CCAACTATGG TCCACCACTG CACCCTCCAA GTACATTCCT
GCCCCTTCAT TTGGACGCAC AGGAATGTCC CGGCAACGGT TTGACAATAT CTGGAAATAT
ATCCGTTGGA GTGAACAATG TCCAGTCCGA CCCGATGGTA TGAGCACTCA TGTTCACCGA
TGGCAACTTG TTGACAACTT TGTCACAAGG TTCAATGAGC ATCGTAGCGA AAACTTTGTA
CCTTCCCATC TGATTTGCGT GGATGAATCT ATCTCAAGAT GGTATGGGCA GGGTGGGGAT
TGGATAAACC ATGGTCTACC AAATTATATT GCAATTGATC GTAAGCCTGA GAATGGGTGC
GAGATTCAAA ACGCAGCGTG TGGACAATCC GGTATTATGC TTCGATTGAA ACTTGTAAAG
GGAAAGACAA TAACTGACGA CGAAGAGGGT GACAAGGAGG ATGAGTATCT ACCGCATGGT
GCAAAGATTA TCAAAGAACT TGTTCGTCCT TGGTGGGGGA GTGATCGGAT TGTGTGTGCT
GATTCTTATT TTGCCTCCGT TGTGACAGCT GTCGAGCTTA AGAGGATTGG CTTGAGATTC
ATTGGGGTTG TGAAGTCGGC AACGAGAAGA TATCCAATGG CCTACCTTTC ACAGTTGGAA
ATGACAAGTA GAGGAGAATG GAAAGGATTG GTGACAGACG GAATCTTGGA TGAAAGTTGT
GACCTGATGG CTTTTGTATG GGTGGACCGA GACCGTCGAT ATTTTATATC AACAGCATCC
AATCTGAATA GAGGCTGGAA TCCAGTTCGC TACCGGTGGA GACAGGTGGA TACATCACCT
GATGCAGACC CTGAGAGGGT GGAGATCAAT ATTGCGCAAC CAGTTGCAGC AGAAGTGTAT
TATTCTTGCT GTGCAATGAT TGACAGACAT AACCGGAGTT GGCAGGATAC ACTGATGCTT
GAAAGAAAAC TTGGCACATG GGATTGGTTG ACACGAGTCA ACTTATCAAT TTTTGGTATC
ATTGTTGTGG ACACATGGTT AGCCTACAGC CAATGTACAG GAATAGGAAA GTCTGCTGGA
CGAGAAGAAA AGCAGAAGGA TTTCTACAGT GCCTTAGCCG AGGAGCTGGT GGACAACCAG
TACGATAGTG TTGGAAGTCG CAAAGTTGGG AGGGATGAGT TGGACAAGGA TAGCCCAACC
ATCTCCAGAA CTGGAGAGCC GCAATGTGGT CTCTCCGCAC ATCTAACACC CACCAAAAGA
AAAAGAAAGA ACAAAGATGG TACTATTAAA AACCAAAGAC AGCAGGGAAG GTGTTTGGTG
TGTTCCAAGA AGACCACATA CAATACTGCC GGGCAAACCA GCAGCCTGAT GCATCGGGTC
CATCGGCATT TGCCAAAAAA ACCGTTGATC GTCAATGTCG CACGGAAAAT TTGA
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| Protein sequence | MPVRDPRLRI GGKVTAKACH VVHLSKCARR YGVNKHSKRL VGTVLDVTTT PVSITTGRTF
TLITAVYDFG ESLFKEKTLN IRSVKAFVPP EDEGMSLIEE LAAEALQAAE ADMEAGNLME
ESVEAPVAEM VETPADIEPD TLVDTEPNTP VDTEPDSPVA EIVETLVDTD TSLDTESENP
VATVHQTEWY VNERKTRLDV NGHVYVRHFH IRTSVGDLIG QDSDNGVRFS RLEYFLLMFP
PTQLTTMCRL TNTQLAQQNK NPITSGELLR FFGMLILTTK FEFSSRAQLW STTAPSKYIP
APSFGRTGMS RQRFDNIWKY IRWSEQCPVR PDGMSTHVHR WQLVDNFVTR FNEHRSENFV
PSHLICVDES ISRWYGQGGD WINHGLPNYI AIDRKPENGC EIQNAACGQS GIMLRLKLVK
GKTITDDEEG DKEDEYLPHG AKIIKELVRP WWGSDRIVCA DSYFASVVTA VELKRIGLRF
IGVVKSATRR YPMAYLSQLE MTSRGEWKGL VTDGILDESC DLMAFVWVDR DRRYFISTAS
NLNRGWNPVR YRWRQVDTSP DADPERVEIN IAQPVAAEVY YSCCAMIDRH NRSWQDTLML
ERKLGTWDWL TRVNLSIFGI IVVDTWLAYS QCTGIGKSAG REEKQKDFYS ALAEELVDNQ
YDSVGSRKVG RDELDKDSPT ISRTGEPQCG LSAHLTPTKR KRKNKDGTIK NQRQQGRCLV
CSKKTTYNTA GQTSSLMHRV HRHLPKKPLI VNVARKI
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