| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_35406 |
|---|
| Symbol | |
|---|
| ID | 7200413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011675 |
|---|
| Strand | - |
|---|
| Start bp | 836605 |
|---|
| End bp | 837489 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179926 |
|---|
| Protein GI | 219118297 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.528252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGTTG CGGCGATCCG CACAAATCAC AAGAGACGGC GTCAAACTTA TCCGATGCCA
CAATTACGAT CGCTCATAAT CCTCGTAGCG GCAGAAATTG CATCTTCCAG AAATACAGTC
TCGTCTTTCG TCGCCACTCC TCGCCCTTTA CTGCTCGCTC CATCGCTAGC GACCTATTCC
ACCACCAAGC CACCAGAATG CACGGTTCAC GACGTTGCCG ACCTCGATTG CATCTCGCAG
CAATTGGGCT ATTTGCCGAC AAATTTTGTT GGTGTGTCAG CCCGTAATGC GGATCGTGTA
CCCGTTGCGA TCCAAACCTA CCCTTTGTTT GGGGGTGCAC CCCGTCGTCA GATCAAAACA
GCCGCAAGCA TGCCGAATAC GCAGTTGCGC ATGTTGGGGA CACCCTTCCC TACACTATAC
TGGTTGACCT GCCCAATAAT TTCCAAGGCT ATTGCGAATC TGGAAGGACA GGGCCACGTA
CAACGTATAC AACAAATCGT GCGAGAATGT GACGATTTAA CGCAACGTTT ATGGACGTGT
CACGCCGAGT ACGCGGAAAA TCGTTGGGAT TCTCTGACCC AGATAGATCG ATCCGTTTTG
GAAAACTCGG ACGAATCAAG TCGTATTCGT GACATGCTGC AATACTCCGG CATTGCTGGA
ACCAACGTTA CGCGGGTAGT AAGGACAGCG CGCGAGAACG ACGGCAATCC GCGTCGGAAT
GAGCCCGCGT CGGGTTGGCA ACCCTCCATC AAATGTTTAC ACACCCACTA TGCACATTTT
CGAAGTACGA CGTTTTCAAA TCAGGTAAAG AAGCCAACGA TCAATCCCGT AGGTGAAATG
GTGGAGGAGC TTTTACGACT CGAGTTTCCG GAAGTACTGT TGTAG
|
|---|
| Protein sequence | MMVAAIRTNH KRRRQTYPMP QLRSLIILVA AEIASSRNTV SSFVATPRPL LLAPSLATYS
TTKPPECTVH DVADLDCISQ QLGYLPTNFV GVSARNADRV PVAIQTYPLF GGAPRRQIKT
AASMPNTQLR MLGTPFPTLY WLTCPIISKA IANLEGQGHV QRIQQIVREC DDLTQRLWTC
HAEYAENRWD SLTQIDRSVL ENSDESSRIR DMLQYSGIAG TNVTRVVRTA RENDGNPRRN
EPASGWQPSI KCLHTHYAHF RSTTFSNQVK KPTINPVGEM VEELLRLEFP EVLL
|
|---|
| |