Gene PHATRDRAFT_35400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_35400 
Symbol 
ID7200410 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp821299 
End bp821687 
Gene Length389 bp 
Protein Length104 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179923 
Protein GI219118290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00448866 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCTCA GCCTTGCTGT CCTGACCTTG CTCCTACTGC TAAGTTTTAC CCCGAGAGAA 
GCTCACTGTC AGTCGTTTGG TAAATCGGGA CTATCAAGAA ACAGGCAGCG ACAGTTTTTT
CTTCGTGGAT CGGTGAAAGT GCGCCACAAC TATTCCACAG ACGCTTTGTT AAATGGTCGA
GAGCTCGAGG ATTTAAATGA TGATTCGGAT CATGGTGGAG ATGAGCGACA TACCGATGAT
GGCAACGACA ACAACTTGAG TACAGGTCAG ATTGTGTTAA TCGTCGTGTT GTCTGTAGTT
TTCTTTTGTG CAGCCATGGT TGTATGTTGC TTTTTTCAGG TTGTATGCTG CTGCTTTATC
TGATACATAC TGGAGGAAAT TGGCTTTAA
 
Protein sequence
MGLSLAVLTL LLLLSFTPRE AHCQSFGKSG LSRNRQRQFF LRGSVKVRHN YSTDALLNGR 
ELEDLNDDSD HGGDERHTDD GNDNNLSTGC MLLLYLIHTG GNWL