Gene PHATRDRAFT_35397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_35397 
Symbol 
ID7200408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp816965 
End bp817999 
Gene Length1035 bp 
Protein Length344 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179723 
Protein GI219117873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00997328 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACACG CGCAGCCTTC TCGTCGCAGT GAACTGCGTC CGTCCCCGAG TTTCGCGTTG 
GCGAAAGATC GTTTGGCGGC GTATCAGGCA CGGAGCAACA GCATGTCGGA ACGAGAGAGT
TCGCGTACCA TTCCAGCCCT GGCCTTGCGA GCGTACCATT TGCCTGGGAA TTCCTGGTGT
GACGATTGGG TCCAGTATTT TGCCAACAAT CATCCCTTGT TCGGAATTTG CTGTCACCAC
CGCTTGCACC CGGTGACTGC CAAATGGAGA TTGATACATC TCGTGGGTTC GATTGTCTTT
GGCTTGGCCG TTACCAACAT TATATGGTTA TGGTTCATCG TTAACGATCA ACACGACGTC
AATGATCCGG TACTGACCAT TTCCTTTGGT GGTGGAATTC GAACGGGAAA TTCCACCGTC
AGTACGGGAA ACTACACGGA CACGGAATAC AGCAACTCGA CGGCCGAAGC TGCGCTACAG
GGACATCAGG AAATTGCCGT CACCGAAGGA ATGTTGATTC TTTGGACGAT TGGAGGAGGC
TTGCACGCAC TCTTCGACAA CACTGTATGG TACATGACAG CCTGTGTTTG TTGTCTCCCC
GGACAGCCCC TTCAATGTCT CTACAAGTAT AAATGGTGCG GTACCTACGT AGTCGTCCTG
TTGGTGGTCA TTTTTACGGC CGTAGCATCC TTCGTGGTTG TACTGCGTGC TTCTCTGGAG
GAAGACGATA TGGTGGATGC GGGGGACCTG AATTCGGCCG GGATTGTCGA TGATTCTATT
GATTTGTCCA ACGGCATTGA TCGGGACCGG GAAAAGTACC GATTTTTGCT CAGTTACACG
GTCGAATTGT TGTTGGCCTT GCTGGTATAC TATCCCGTCG TCGGCACTAT CCTGTTCACT
GGAATTCTAG GCTGTGGTCG ATTACCGGTA CTGGGCGGAC GGCCATACGA AGTCGAGTGC
GAACGCAAAC TGCAACAACG AGAGTCACGG CGATCTTTCA ACAATGGTAG AAAGACTTCC
TCCAACCTAG TATGA
 
Protein sequence
MGHAQPSRRS ELRPSPSFAL AKDRLAAYQA RSNSMSERES SRTIPALALR AYHLPGNSWC 
DDWVQYFANN HPLFGICCHH RLHPVTAKWR LIHLVGSIVF GLAVTNIIWL WFIVNDQHDV
NDPVLTISFG GGIRTGNSTV STGNYTDTEY SNSTAEAALQ GHQEIAVTEG MLILWTIGGG
LHALFDNTVW YMTACVCCLP GQPLQCLYKY KWCGTYVVVL LVVIFTAVAS FVVVLRASLE
EDDMVDAGDL NSAGIVDDSI DLSNGIDRDR EKYRFLLSYT VELLLALLVY YPVVGTILFT
GILGCGRLPV LGGRPYEVEC ERKLQQRESR RSFNNGRKTS SNLV