Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35397 |
Symbol | |
ID | 7200408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 816965 |
End bp | 817999 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179723 |
Protein GI | 219117873 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00997328 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACACG CGCAGCCTTC TCGTCGCAGT GAACTGCGTC CGTCCCCGAG TTTCGCGTTG GCGAAAGATC GTTTGGCGGC GTATCAGGCA CGGAGCAACA GCATGTCGGA ACGAGAGAGT TCGCGTACCA TTCCAGCCCT GGCCTTGCGA GCGTACCATT TGCCTGGGAA TTCCTGGTGT GACGATTGGG TCCAGTATTT TGCCAACAAT CATCCCTTGT TCGGAATTTG CTGTCACCAC CGCTTGCACC CGGTGACTGC CAAATGGAGA TTGATACATC TCGTGGGTTC GATTGTCTTT GGCTTGGCCG TTACCAACAT TATATGGTTA TGGTTCATCG TTAACGATCA ACACGACGTC AATGATCCGG TACTGACCAT TTCCTTTGGT GGTGGAATTC GAACGGGAAA TTCCACCGTC AGTACGGGAA ACTACACGGA CACGGAATAC AGCAACTCGA CGGCCGAAGC TGCGCTACAG GGACATCAGG AAATTGCCGT CACCGAAGGA ATGTTGATTC TTTGGACGAT TGGAGGAGGC TTGCACGCAC TCTTCGACAA CACTGTATGG TACATGACAG CCTGTGTTTG TTGTCTCCCC GGACAGCCCC TTCAATGTCT CTACAAGTAT AAATGGTGCG GTACCTACGT AGTCGTCCTG TTGGTGGTCA TTTTTACGGC CGTAGCATCC TTCGTGGTTG TACTGCGTGC TTCTCTGGAG GAAGACGATA TGGTGGATGC GGGGGACCTG AATTCGGCCG GGATTGTCGA TGATTCTATT GATTTGTCCA ACGGCATTGA TCGGGACCGG GAAAAGTACC GATTTTTGCT CAGTTACACG GTCGAATTGT TGTTGGCCTT GCTGGTATAC TATCCCGTCG TCGGCACTAT CCTGTTCACT GGAATTCTAG GCTGTGGTCG ATTACCGGTA CTGGGCGGAC GGCCATACGA AGTCGAGTGC GAACGCAAAC TGCAACAACG AGAGTCACGG CGATCTTTCA ACAATGGTAG AAAGACTTCC TCCAACCTAG TATGA
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Protein sequence | MGHAQPSRRS ELRPSPSFAL AKDRLAAYQA RSNSMSERES SRTIPALALR AYHLPGNSWC DDWVQYFANN HPLFGICCHH RLHPVTAKWR LIHLVGSIVF GLAVTNIIWL WFIVNDQHDV NDPVLTISFG GGIRTGNSTV STGNYTDTEY SNSTAEAALQ GHQEIAVTEG MLILWTIGGG LHALFDNTVW YMTACVCCLP GQPLQCLYKY KWCGTYVVVL LVVIFTAVAS FVVVLRASLE EDDMVDAGDL NSAGIVDDSI DLSNGIDRDR EKYRFLLSYT VELLLALLVY YPVVGTILFT GILGCGRLPV LGGRPYEVEC ERKLQQRESR RSFNNGRKTS SNLV
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