| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_35237 |
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| Symbol | |
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| ID | 7200595 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | - |
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| Start bp | 410727 |
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| End bp | 414474 |
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| Gene Length | 3748 bp |
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| Protein Length | 1052 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179843 |
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| Protein GI | 219118123 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATA TTGCTCCCAA CAACCCTACC ATTGACGACG CGTTCAACGC TGTTGTCGTT
GACGGAACTG TTCAAGCCAA TGTCGCCCCT GTTATCGAAC ATCCTAACGT TGCGAACGAA
AACCCTGTCT TTCCCATTGT TGTTAACCAT TATGACAATC TTCTTGCCAT GACCGGAATG
AACATTGGTA CCCGCAAGGC TCTCGTGTCG GAAGGGTTTG GCTCTATGTC CTCTTTGGTC
CGCTTGACCA CTAAGGACCT TGACTCCCTT GTCGATATGA TGAACAAGCA ACACCGTGGA
AAATCCTTCA AGAGCACTTA TCCCCCTGGA ACGGCTGATA ACGAGAAGGA GATCCATATT
GGCTTTAACT CTAAGTCAAC TCTTTCGGTT ATCATCCACT GGGCTGAACG TTTGAAACGT
CTTGGAAAAG AGGTTCGTGC TGAGGACTAC ACGAGTGAAG TTGATCAGCT TGCCCGCGAC
CGCATGGAAG AGGAAAAGGA AATCCGCGAG GTGGCCAAGA CCCAGACACC GGTCAAGCCT
ACTCCCCTCA AGGACATGAC CAAATGGCGT TCTTTCTTCG AGAATTGGAA CCAGTACATG
AGTTGCTGTC GCGGTCCCTC GCTGACCCCC CTCACGTATG TTTACCGTAC CCAGGAGGAG
CCTGAAACTG CCCCCCTTGA AGATTATGAC GACATGGATG CTTACTTGGT GGCCCAGACG
ATTTTATCGG GTCCCAAGTT TGTAATTGAC AACAAGCGAG TTTTTGATGA ATTCAAAGAG
GCAATTACCA CGACCGGCCC AGGATGGGCT TTCATTAAGG AGTTCAACAA GGGCAAGAAC
GGTCGCGCTG CTATTTTGAA GTTGAAGGCA CAGGCAGAAG GAACCCTCAA CGAATCTATT
CGTCGGGATG ATGCAATCAA AATCTTGTCA ACAACAACGT ACAGCGGTCC TAGTCGCAAT
TGGAACATTG ACACCTTGTT GCAGAAATTC CAATATGCGG TCTCTGAGCT GGTCGAAATT
GACGGGGCCT CTTTACCGGA TGGCCAGCTT GTCACCTACT TGGTGCAGGC ACTCAAAGAT
CCCAGTTTGA GTTACGTTCG CGACACTATT CGCACTAATG CTACCTACCG GAACAGTTTC
CACGAGGCTC AGCTTTTTGT GAAAACGTTC GTTTCTTCAT CTTCGATCAA GACCGAAACA
ACGCCCCGAC AGATAAATGA TGTTCAGACG TCCAATGGTG GATCTGGTGG TGGAAAATCA
GGTGGCGGTG GAAAAGGAGG AAGCAAGTCG GGCGCTATTA AGGGCCCAGT TTTGGCTCGT
AGTTATTCTC CAGGCGAATG GAAGAGTCTT ACCAAAGAGC AGCAAGAGAA AGTGAAGTCT
ATGCGTTCTA AGAAGAAGCA AGTGAGCAAA CCAAGCGAAG AAAAGGAACG CAGTGTTGAC
AGTGTCTCGC GGGAGGATAC CGCAGGCATT AAAGAAGATC ATGCCAATGA TAAGTCTCAA
CCAATAGACG ATGCTGCCGG TCTTCAATTT GGACGTGGTG CACACAAAAA ATCGGTTGGA
TTTGTCATGG ATAAAGCTTC TCCCTCTGGA AACGGAGCGA AGAAGCAGAA ACTATTGTGA
AATGCGGCCG CGGTGGCTTG CGTTTTGGGG ACTGAAATAC GCAAGGCACC GGACAGAGAA
ATAGTTGCCC TCACCTCTAC ACGCAGTATT GGGGATGTCA ATTCAGGCTC GAATCACCAC
ATTGGAGCTA GATGCGAATT GGATTCCCAT GCGGACACAT GCGTTGCTGG GGCTAACACT
ATCCTCATTA GTGACTCGCA AAAGTCCGTT ACCGTTCGAC CTTTTTCGGG GGAATACTTA
GCAATGACAA ATATTCCTAT TGGAACGGTC GCTACGGCCT ACACGGTACC AGATGATGGA
CGAGTGGTGA TTCTAATCAT TAATCAGGCT CTCTACTTTG GGGACCGATT GAAGAACACA
CTACTCACCC CAAACCAGAT GCGAGATTAC GGTATTGAAG TCGACGATGC CCCTCGGCAG
TATGTTGCCG GCTCTCAACA CTCCTTATAT GTTCCTGATT CTAACTTACG GATTCCGCTG
CAGCTGCGCG GTATATTCTT GTTTTTGGAA TCGCGGAAAC CCACGCAACA GGAAATGGAC
GAGTGTGAGC ATATTGTACT CACCTCCGAT GCGCCGTGGG AGCCATGCTC GGTTGAATTT
GCCAATCGAG AGCAAGAGGC CGTCAGAAGT GACCGTCGCG TATCTTTGGT GGACTCTGGG
GGAAATTCCA CTGGCCAGGT GCATTACATA GCATACCCGA GTGACACTCG GACTGTTGCA
GCTGCCCAAC GAGTACTCGA AACATTTCGG TCCCTAACCG AAATTGAATT TTGTGAGACC
AAATTGGTGG ACCGCTTAAT TGCTTGCGTT AATGTCGCTT CGGACGACCA CTGTGGAGAC
GGGTTGGACG GACGTGCTGA TCCGGACGTA TACCCAGCTT CAGACGACTT CATAAGAGTT
GTCTCCGGTA TGACGTCAAG CGAACGAAAG TCAGCGTTGA CTCCTGAGGT TTTGTCGCGA
CGATGGAATA TTGGCTTAGA TTCGGCCAAA CGGACCCTGC AAGTAACAAC ACAGAAAGGC
GTGAGAACTG TGTTGCACCC TTTGACTCGA CGGTACCGGA CCCGGCAGTC TCATCTGCGA
TTCCCTACCA TTCGGACAAA GGTTTACACA GACACTATGT TTTCCTCCGT TACTTCCATT
CGTCAGTACA AGTGTGCCCA GGTTTTTACC ACAAACACTG CCTATTCGCG CGTTTACCCT
CTGCAATCCA AGCAGAATGC CCCGGATGCC CTCATGAAAT GGATCCAGGA CGTCGGGGTA
ATGAGTGACC TTGTTTATGA TGGGTCTAAA GAGCAGGGAG GTGGCAAGCA TTGGCGTGAG
ATTGAACAAC GCCATCACAT ACAACGGCAC GTAACGGAAC CACACAGTCA GTGGCAGAAT
CGAGCTGAGG GGGAAATCCG AGAGATTAAG AAATCTGTTC GCCACCGTTT ACAAGCATCC
CGAGCACCAA AACGACTTTG GTGCTTCTGT ACGGAATGGG TGTCGGCCGT CCGACGGTTG
ACAGCCCTTA GCCTGCCTGC TTTGAACGGC CGCGTCGCAA CGGAACTTCT GGAGGGGGAG
ACCCCAGACA TTTCAGAATA CGCACAATTT GACTGGTATG AACCAGTATG GTTCATTGAT
CCGACCTCTT CTTTCCCGGA ACCTAAGCGA AAGCTTGGTC GTTGGATTGG GGTTGCATCG
GATGTGGGGC AGGCCATGAC CTTTTGGATT TTACCAAAGT CCTGCTCCCC AATTGCGCGT
TCCTTGGTAG CTCGAGTTGA CCCTGATGTG TCCTGCACGG ACGAGTTTAA AGCTGATCTT
GCCATGTTAG ACTTGTCCAT TGACAATAAA ATTGGCAATA ACAAAACTGC AGAACAGAAC
AAAGAAATTG ACAGCTCGCT CGGCAACCTG GTGTCGGGTC CAGCTGACGA TTTATTTGAA
AAGGTAGCCA ACAAAGAGTT TTATCCGCTC GAAGAGGCTG CTGAAAAAGC CGAAGCTGAT
GATTTTACGC CCGAATCCAT GGACGAGTAC CTGACAGCTG AAGTTTTACT TCCATTTGGT
GGTGAATTGT TACGTGGGGT GGTTAAAGCT CGGAAGCGCG ATGCCGACGG AAACCCTCTG
GGGACTCGGA ACAGCAACCC AATTCTAG
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| Protein sequence | MSDIAPNNPT IDDAFNAVVV DGTVQANVAP VIEHPNVANE NPVFPIVVNH YDNLLAMTGM
NIGTRKALVS EGFGSMSSLV RLTTKDLDSL VDMMNKQHRG KSFKSTYPPG TADNEKEIHI
GFNSKSTLSV IIHWAERLKR LGKEVRAEDY TSEVDQLARD RMEEEKEIRE VAKTQTPVKP
TPLKDMTKWR SFFENWNQYM SCCRGPSLTP LTYVYRTQEE PETAPLEDYD DMDAYLVAQT
ILSGPKFVID NKRVFDEFKE AITTTGPGWA FIKEFNKGKN GRAAILKLKA QAEGTLNESI
RRDDAIKILS TTTYSGPSRN WNIDTLLQKF QYAVSELVEI DGASLPDGQL VTYLVQALKD
PSLSYVRDTI RTNATYRNSF HEAQLFVKTF VSSSSIKTET TPRQINDVQT SNGGSGGGKS
GGGGKGGSKS GAIKGPVLAR SYSPGEWKSL TKEQQEKVKS MRSKKKQVSK PSEEKERSVD
SVSREDTAGI KEDHANDKSQ PIDDAAGLQF GRGAHKKSVG FVMDKASPSG NGAKKQKLFI
GDVNSGSNHH IGARCELDSH ADTCVAGANT ILISDSQKSV TVRPFSGEYL AMTNIPIGTV
ATAYTVPDDG RVVILIINQA LYFGDRLKNT LLTPNQMRDY GIEVDDAPRQ YVAGSQHSLY
VPDSNLRIPL QLRGIFLFLE SRKPTQQEMD ECEHIVLTSD APWEPCSVEF ANREQEAVRS
DRRVSLVDSG GNSTGQVHYI AYPSDTRTVA AAQRVLETFR SLTEIEFCET KLVDRLIACV
NVASDDHCGD GLDGRADPDV YPASDDFIRV VSGMTQWQNR AEGEIREIKK SVRHRLQASR
APKRLWCFCT EWVSAVRRLT ALSLPALNGR VATELLEGET PDISEYAQFD WYEPVWFIDP
TSSFPEPKRK LGRWIGVASD VGQAMTFWIL PKSCSPIARS LVARVDPDVS CTDEFKADLA
MLDLSIDNKI GNNKTAEQNK EIDSSLGNLV SGPADDLFEK VANKEFYPLE EAAEKAEADD
FTPESMDEYL TAELGSAMPT ETLWGLGTAT QF
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