Gene PHATRDRAFT_35200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_35200 
Symbol 
ID7200577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp317463 
End bp318326 
Gene Length864 bp 
Protein Length287 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179621 
Protein GI219117660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.15649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTCG GATTCCTCAC GAGGCAGGGC GGCGGCTGGA TGCGTCGCTA TCTACGCGTC 
CGCAAGGATA TCTTACTTGC ACAATGGACA ACACCCGATC GCTATCCCTG TGCCCCCATA
AGCTTGTTTG ACTTCAGCAA CCACGACGAC TATTTGGATG CCATCAAAGT TCACGAAAAG
GATCAAGATG GCTGGAGAAT TTCCGATGAT CGGGTGATTG GTGGGTTTTC TGAGGCATCC
GCCTTTATGG TTCGGACGAA CAACGACCTG GCCACAATTG CGTCAGGAGA AACCCCGAAT
CCGGTTCTAG ACGCTCAACA ATTTTACGAT GAACAAGACG TGAATAAGAA CGAAAGCACA
AGCAAAAATA AAAAGCCCCT TACCTCTTTT CTTCGATGGC AAGGGACAAT TGACACAGAA
ATTGGTTTAC AAAGCGATGC GCAGAGATCG GGCTTTGCTG CGTTACGTTC GCCTGAATTC
TTTTATGGAG GAGCCAACCT TTGCGGCTTG TATTCAGCGC TGGAGCTACT TTGTCGAACT
GATGGAAGGT CCTACACGAT CAATTTGAAG GTAGCCAGCT CGATACCGGA TGACATCTAC
CAAGGAACAG TTGAAATACC GGCCTCTAGC GACACCTTTA GCAGCATTGT CCTTCCATTC
TCCGAGTTCG GTTTAACTGC ACGTGGCAGA GACAGAGAGA TTCATCGCGA ACTCGATGAC
GATGTATCTT TGGAATCGAT CGGCGTAGCA CTAATGGACG GAAGAAATGG CGACTTTCGC
TTTGATCTAG CAAAAATTCG TGCAGTAAAC ATTGTAGATG GAACACCCCA TCACAAAATA
GTCTCAGACC GCGACACAAA CTGA
 
Protein sequence
MKFGFLTRQG GGWMRRYLRV RKDILLAQWT TPDRYPCAPI SLFDFSNHDD YLDAIKVHEK 
DQDGWRISDD RVIGGFSEAS AFMVRTNNDL ATIASGETPN PVLDAQQFYD EQDVNKNEST
SKNKKPLTSF LRWQGTIDTE IGLQSDAQRS GFAALRSPEF FYGGANLCGL YSALELLCRT
DGRSYTINLK VASSIPDDIY QGTVEIPASS DTFSSIVLPF SEFGLTARGR DREIHRELDD
DVSLESIGVA LMDGRNGDFR FDLAKIRAVN IVDGTPHHKI VSDRDTN