Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35200 |
Symbol | |
ID | 7200577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 317463 |
End bp | 318326 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179621 |
Protein GI | 219117660 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.15649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTCG GATTCCTCAC GAGGCAGGGC GGCGGCTGGA TGCGTCGCTA TCTACGCGTC CGCAAGGATA TCTTACTTGC ACAATGGACA ACACCCGATC GCTATCCCTG TGCCCCCATA AGCTTGTTTG ACTTCAGCAA CCACGACGAC TATTTGGATG CCATCAAAGT TCACGAAAAG GATCAAGATG GCTGGAGAAT TTCCGATGAT CGGGTGATTG GTGGGTTTTC TGAGGCATCC GCCTTTATGG TTCGGACGAA CAACGACCTG GCCACAATTG CGTCAGGAGA AACCCCGAAT CCGGTTCTAG ACGCTCAACA ATTTTACGAT GAACAAGACG TGAATAAGAA CGAAAGCACA AGCAAAAATA AAAAGCCCCT TACCTCTTTT CTTCGATGGC AAGGGACAAT TGACACAGAA ATTGGTTTAC AAAGCGATGC GCAGAGATCG GGCTTTGCTG CGTTACGTTC GCCTGAATTC TTTTATGGAG GAGCCAACCT TTGCGGCTTG TATTCAGCGC TGGAGCTACT TTGTCGAACT GATGGAAGGT CCTACACGAT CAATTTGAAG GTAGCCAGCT CGATACCGGA TGACATCTAC CAAGGAACAG TTGAAATACC GGCCTCTAGC GACACCTTTA GCAGCATTGT CCTTCCATTC TCCGAGTTCG GTTTAACTGC ACGTGGCAGA GACAGAGAGA TTCATCGCGA ACTCGATGAC GATGTATCTT TGGAATCGAT CGGCGTAGCA CTAATGGACG GAAGAAATGG CGACTTTCGC TTTGATCTAG CAAAAATTCG TGCAGTAAAC ATTGTAGATG GAACACCCCA TCACAAAATA GTCTCAGACC GCGACACAAA CTGA
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Protein sequence | MKFGFLTRQG GGWMRRYLRV RKDILLAQWT TPDRYPCAPI SLFDFSNHDD YLDAIKVHEK DQDGWRISDD RVIGGFSEAS AFMVRTNNDL ATIASGETPN PVLDAQQFYD EQDVNKNEST SKNKKPLTSF LRWQGTIDTE IGLQSDAQRS GFAALRSPEF FYGGANLCGL YSALELLCRT DGRSYTINLK VASSIPDDIY QGTVEIPASS DTFSSIVLPF SEFGLTARGR DREIHRELDD DVSLESIGVA LMDGRNGDFR FDLAKIRAVN IVDGTPHHKI VSDRDTN
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