| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_35196 |
|---|
| Symbol | |
|---|
| ID | 7200575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011675 |
|---|
| Strand | - |
|---|
| Start bp | 310337 |
|---|
| End bp | 311323 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179827 |
|---|
| Protein GI | 219118090 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTGA ACTCTTCAAT ATTGTGTCCG AATCAAGCAA ATTTGCGGGC CTGGCCTAGT
CCATCTGACT GCCTTGCCTG TCGAGTTATC GAAGAATATT GGAAAGCGCA AAATGACGAA
TCGAATAAGC TATTTTGTAT TGACTGTGCA ATGCAAGAAA CTTTATGGGT ATGCCTGACA
TGTGGATTCG TTGGCTGTGG TCGATATTCG AACAAGCACG CAGCAATCCA TTTCACGGAT
ACGGGCCATC CATTTTCATT GGAATTGGCA ACGCTTCGAA TTTGGAGCTA TACCGATGGT
GAATTCGCAC ATCGCGTTGA CCTGCTGGAC TGTCCCTCCT CGCCGCCACG TTGTCGGCCA
TGGACGCGGC GATCTCCATC ACCGGCTGGA GGGACATCAA ACGTTGTGGC ATACAACAAT
GAAATTTACA ATCAACAAGA CAAGCATTCA AAAAAAGCCG TAATGCTTGG TGAGGAATAC
GAGGCCCTCT TGCAAAGTGC ACTCGAGGAG CAAGCACAAC ACTACGAAGG TGAAATAAGC
AGACTAAGAG CAGTCCTTAC TGCAAAAGAG GTTGATCTGG ACGCGATGAC GCACGCAGAA
ATGGAACAAA CCGAATCCTT GCGGCAGGAG ATTTTAAAGC TTCGATTAGC AACCGATTGT
ACAGGTCGAG ATCTCGTAGA CTTCCAAGGC CAGGAGGCCG ACCATAGGGC AACTTCCCAG
CGCTTGCTCC GCGAGCAACA AATTACCAAG AACCTCCTGC GACAAATAGA AGAAGAACTC
GCGAGTAAGA ACCAGTACGG TAGAATCCAG ATAGAGGAGC TCGAGCAGCA AATTGCAGAT
CTTACTGCAA ACCAAAGAAT GATGCACCAA TTCTCGCAAG ATGGGGAGCT GGCAAATTCA
CAGATCTGGG GCACTTCGGG CGAAACGCAC AGTAGGCACA AAACTCCCAA AAAGGGCAAA
AAGATGCGAC GCTATTTTCG AAAATAG
|
|---|
| Protein sequence | MSLNSSILCP NQANLRAWPS PSDCLACRVI EEYWKAQNDE SNKLFCIDCA MQETLWVCLT
CGFVGCGRYS NKHAAIHFTD TGHPFSLELA TLRIWSYTDG EFAHRVDLLD CPSSPPRCRP
WTRRSPSPAG GTSNVVAYNN EIYNQQDKHS KKAVMLGEEY EALLQSALEE QAQHYEGEIS
RLRAVLTAKE VDLDAMTHAE MEQTESLRQE ILKLRLATDC TGRDLVDFQG QEADHRATSQ
RLLREQQITK NLLRQIEEEL ASKNQYGRIQ IEELEQQIAD LTANQRMMHQ FSQDGELANS
QIWGTSGETH SRHKTPKKGK KMRRYFRK
|
|---|
| |