Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35150 |
Symbol | |
ID | 7200551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 171342 |
End bp | 172487 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179806 |
Protein GI | 219118046 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.397673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATTG CTTCGGGCCT TTCCCGTTCA GCTTTGGCTT TTCGTTTGCT TTCTCCTCAA GTCGTGGCTC CACGGGCTTC CAAATTTCCA GGTTCTATTC AAGTCTCCGC TGTCATTTTC GTTGGACTTA GTACGACGCG GAGGAATTGC TCCTTTGTAA GCATGCAGTC CAGCCTGGAC ACCCCACCGC TAATTGACGT GGACTGCAAT CTCATGCATA TTGATTTACA ACGGTTCCGG ATTGACAGCT TGGCAAACGA CAAAAGCCTG GCAACACCCT TGGATATTTT GCTCCAGGAC GCCGTACAAG AGCAAAATAT TGTAGGGATA CTTTCTCCCA GCAGTACCAT TGAAGAAGCT AAGGCAAGCG CTCATGTTCT ACAACAAGTT CCGCTAGATA CCTTGGTTAT CCGATCGACC GTTGGTGTCC ATCCTTATCA TATAAACGAT GCTAATTTGC GAGATAAAAG TTTAGAGCAG CACATGGAGA TTGCAAAAGA TCTGTTGCGT TCCAAACCAG TACTCTTTAC TGCTGTTGGT GAATGCGGAC TTGATGCCTC AGAGGGATTT CCTCCCGTCG CTTCTCAGAT ACCATGGTTT CAAGCGCAGA TTGAAATTGC AGAAGAGTTG CAACTTCCAC TTTTTGTCCA CGAGCGGCTA GCATTTGATG CGACCATGGA TTTACTTCAG AACGTCAATG TCCCCATCAT AATTCACTGC TTTACTGGAA GCTCGGGTGA GCTACAAGCT TACATCAAAC GTGGTTATTC TGTTTCAATA TCTGGTTTCA TTTTTAAAGA GGAAGCCGCA GGCATTTGTG AATGCTTGCG TGATGGTGTT GTTCCTTTGG ACAAGCTCAT GATTGAAACT GACGCCCCGT ACATGGGTTT TGCGGGTTGT CGGGATCGTT ATGTTGCCAA AAACGATGCA TTTGTACAAA CCCTGAACTC GAAAAAGCGC AAGCGACTGC TCAATTCAAC TTATCCCAAC GTGCCCAGTT CTTTGCCAGC GATTTTTACG AAAGTCTTGG AAGAAATGAA CACGGGACGA ACAGAGAGAG GCTGCGCTAG CTTGTCGGGC TACGAAATGG CATTGCACCT CAACCGCAAT GCCAATGGCT TTTTCAAGTT TGGACTAGAT ATGTAA
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Protein sequence | MAIASGLSRS ALAFRLLSPQ VVAPRASKFP GSIQVSAVIF VGLSTTRRNC SFVSMQSSLD TPPLIDVDCN LMHIDLQRFR IDSLANDKSL ATPLDILLQD AVQEQNIVGI LSPSSTIEEA KASAHVLQQV PLDTLVIRST VGVHPYHIND ANLRDKSLEQ HMEIAKDLLR SKPVLFTAVG ECGLDASEGF PPVASQIPWF QAQIEIAEEL QLPLFVHERL AFDATMDLLQ NVNVPIIIHC FTGSSGELQA YIKRGYSVSI SGFIFKEEAA GICECLRDGV VPLDKLMIET DAPYMGFAGC RDRYVAKNDA FVQTLNSKKR KRLLNSTYPN VPSSLPAIFT KVLEEMNTGR TERGCASLSG YEMALHLNRN ANGFFKFGLD M
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